Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CKS2P33552 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CKS2P33552 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
CKS2P33552 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC19.24■□□□□ 0.67
CKS2P33552 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CKS2P33552 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CKS2P33552 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CKS2P33552 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC19.22■□□□□ 0.67
CKS2P33552 AL121749.1-202ENST00000609313 2153 ntBASIC19.22■□□□□ 0.67
CKS2P33552 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CKS2P33552 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CKS2P33552 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
CKS2P33552 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CKS2P33552 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CKS2P33552 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CKS2P33552 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CKS2P33552 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CKS2P33552 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CKS2P33552 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CKS2P33552 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CKS2P33552 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CKS2P33552 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CKS2P33552 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CKS2P33552 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CKS2P33552 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CKS2P33552 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CKS2P33552 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CKS2P33552 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC19.18■□□□□ 0.66
CKS2P33552 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CKS2P33552 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CKS2P33552 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CKS2P33552 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CKS2P33552 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CKS2P33552 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.15■□□□□ 0.66
CKS2P33552 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CKS2P33552 DRD5P2-201ENST00000421395 2012 ntBASIC19.15■□□□□ 0.66
CKS2P33552 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CKS2P33552 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CKS2P33552 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CKS2P33552 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CKS2P33552 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CKS2P33552 AL139393.2-201ENST00000608721 2025 ntBASIC19.13■□□□□ 0.65
CKS2P33552 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CKS2P33552 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CKS2P33552 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CKS2P33552 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC19.12■□□□□ 0.65
CKS2P33552 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CKS2P33552 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CKS2P33552 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CKS2P33552 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC19.12■□□□□ 0.65
CKS2P33552 AC135731.1-201ENST00000569415 2548 ntBASIC19.12■□□□□ 0.65
CKS2P33552 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CKS2P33552 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CKS2P33552 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.11■□□□□ 0.65
CKS2P33552 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
CKS2P33552 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CKS2P33552 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CKS2P33552 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.1■□□□□ 0.65
CKS2P33552 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CKS2P33552 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CKS2P33552 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC19.1■□□□□ 0.65
CKS2P33552 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CKS2P33552 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CKS2P33552 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CKS2P33552 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CKS2P33552 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CKS2P33552 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CKS2P33552 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CKS2P33552 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CKS2P33552 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CKS2P33552 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CKS2P33552 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
CKS2P33552 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CKS2P33552 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CKS2P33552 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CKS2P33552 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CKS2P33552 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CKS2P33552 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CKS2P33552 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
CKS2P33552 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CKS2P33552 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CKS2P33552 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
CKS2P33552 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CKS2P33552 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CKS2P33552 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC19.05■□□□□ 0.64
CKS2P33552 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.05■□□□□ 0.64
CKS2P33552 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CKS2P33552 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CKS2P33552 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CKS2P33552 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CKS2P33552 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CKS2P33552 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC19.03■□□□□ 0.64
CKS2P33552 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CKS2P33552 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CKS2P33552 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CKS2P33552 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CKS2P33552 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CKS2P33552 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CKS2P33552 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC19.01■□□□□ 0.63
CKS2P33552 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms