Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC24.88■■□□□ 1.57
RAB40ALP0C0E4 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RAB40ALP0C0E4 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
RAB40ALP0C0E4 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RAB40ALP0C0E4 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
RAB40ALP0C0E4 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.86■■□□□ 1.57
RAB40ALP0C0E4 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RAB40ALP0C0E4 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RAB40ALP0C0E4 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
RAB40ALP0C0E4 MIR639-201ENST00000384974 98 ntBASIC24.84■■□□□ 1.57
RAB40ALP0C0E4 AGPS-202ENST00000409888 815 ntTSL 4 BASIC24.84■■□□□ 1.57
RAB40ALP0C0E4 DUX4L11-201ENST00000611504 1267 ntBASIC24.84■■□□□ 1.57
RAB40ALP0C0E4 DUX4L12-201ENST00000614593 1267 ntBASIC24.84■■□□□ 1.57
RAB40ALP0C0E4 DUX4L14-201ENST00000621227 1267 ntBASIC24.84■■□□□ 1.57
RAB40ALP0C0E4 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
RAB40ALP0C0E4 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
RAB40ALP0C0E4 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
RAB40ALP0C0E4 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
RAB40ALP0C0E4 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC24.83■■□□□ 1.57
RAB40ALP0C0E4 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC24.83■■□□□ 1.57
RAB40ALP0C0E4 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
RAB40ALP0C0E4 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RAB40ALP0C0E4 RPS2-202ENST00000526522 924 ntTSL 2 BASIC24.82■■□□□ 1.56
RAB40ALP0C0E4 MIR3648-2-201ENST00000581792 180 ntBASIC24.82■■□□□ 1.56
RAB40ALP0C0E4 MIR3648-1-201ENST00000615959 180 ntBASIC24.82■■□□□ 1.56
RAB40ALP0C0E4 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
RAB40ALP0C0E4 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC24.81■■□□□ 1.56
RAB40ALP0C0E4 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RAB40ALP0C0E4 MIR4449-201ENST00000578365 66 ntBASIC24.8■■□□□ 1.56
RAB40ALP0C0E4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC24.8■■□□□ 1.56
RAB40ALP0C0E4 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC24.8■■□□□ 1.56
RAB40ALP0C0E4 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
RAB40ALP0C0E4 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RAB40ALP0C0E4 EI24-212ENST00000615917 1407 ntTSL 2 BASIC24.79■■□□□ 1.56
RAB40ALP0C0E4 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
RAB40ALP0C0E4 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RAB40ALP0C0E4 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RAB40ALP0C0E4 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RAB40ALP0C0E4 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
RAB40ALP0C0E4 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
RAB40ALP0C0E4 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RAB40ALP0C0E4 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC24.77■■□□□ 1.56
RAB40ALP0C0E4 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC24.77■■□□□ 1.56
RAB40ALP0C0E4 AL161658.1-201ENST00000623641 1967 ntBASIC24.76■■□□□ 1.55
RAB40ALP0C0E4 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
RAB40ALP0C0E4 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
RAB40ALP0C0E4 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC24.76■■□□□ 1.55
RAB40ALP0C0E4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC24.76■■□□□ 1.55
RAB40ALP0C0E4 AC016575.1-201ENST00000607026 382 ntBASIC24.76■■□□□ 1.55
RAB40ALP0C0E4 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RAB40ALP0C0E4 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
RAB40ALP0C0E4 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RAB40ALP0C0E4 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
RAB40ALP0C0E4 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RAB40ALP0C0E4 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RAB40ALP0C0E4 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.75■■□□□ 1.55
RAB40ALP0C0E4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.74■■□□□ 1.55
RAB40ALP0C0E4 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
RAB40ALP0C0E4 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
RAB40ALP0C0E4 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.73■■□□□ 1.55
RAB40ALP0C0E4 CR559946.2-201ENST00000623684 991 ntBASIC24.73■■□□□ 1.55
RAB40ALP0C0E4 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
RAB40ALP0C0E4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RAB40ALP0C0E4 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RAB40ALP0C0E4 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC24.71■■□□□ 1.55
RAB40ALP0C0E4 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
RAB40ALP0C0E4 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
RAB40ALP0C0E4 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
RAB40ALP0C0E4 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC24.69■■□□□ 1.54
RAB40ALP0C0E4 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
RAB40ALP0C0E4 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC24.68■■□□□ 1.54
RAB40ALP0C0E4 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
RAB40ALP0C0E4 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC24.67■■□□□ 1.54
RAB40ALP0C0E4 DUX4L13-201ENST00000554103 1267 ntBASIC24.66■■□□□ 1.54
RAB40ALP0C0E4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.66■■□□□ 1.54
RAB40ALP0C0E4 DUX4L15-201ENST00000611059 1267 ntBASIC24.66■■□□□ 1.54
RAB40ALP0C0E4 DUX4L23-201ENST00000615195 1269 ntBASIC24.66■■□□□ 1.54
RAB40ALP0C0E4 DUX4L24-201ENST00000617576 1269 ntBASIC24.66■■□□□ 1.54
RAB40ALP0C0E4 DUX4L22-201ENST00000618238 1269 ntBASIC24.66■■□□□ 1.54
RAB40ALP0C0E4 DUX4L20-201ENST00000619712 1269 ntBASIC24.66■■□□□ 1.54
RAB40ALP0C0E4 DUX4L21-201ENST00000622058 1269 ntBASIC24.66■■□□□ 1.54
RAB40ALP0C0E4 DUX4L10-201ENST00000622460 1267 ntBASIC24.66■■□□□ 1.54
RAB40ALP0C0E4 DUX4L25-201ENST00000624915 1269 ntBASIC24.66■■□□□ 1.54
RAB40ALP0C0E4 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC24.64■■□□□ 1.54
RAB40ALP0C0E4 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
RAB40ALP0C0E4 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
RAB40ALP0C0E4 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
RAB40ALP0C0E4 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RAB40ALP0C0E4 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.63■■□□□ 1.53
RAB40ALP0C0E4 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.63■■□□□ 1.53
RAB40ALP0C0E4 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
RAB40ALP0C0E4 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RAB40ALP0C0E4 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RAB40ALP0C0E4 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RAB40ALP0C0E4 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RAB40ALP0C0E4 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC24.61■■□□□ 1.53
RAB40ALP0C0E4 AC010864.1-201ENST00000609407 1511 ntBASIC24.61■■□□□ 1.53
RAB40ALP0C0E4 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RAB40ALP0C0E4 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
RAB40ALP0C0E4 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms