Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC29.87■■■□□ 2.37
MYCNP04198 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC29.86■■■□□ 2.37
MYCNP04198 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
MYCNP04198 DUX4L13-201ENST00000554103 1267 ntBASIC29.85■■■□□ 2.37
MYCNP04198 DUX4L15-201ENST00000611059 1267 ntBASIC29.85■■■□□ 2.37
MYCNP04198 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC29.85■■■□□ 2.37
MYCNP04198 DUX4L23-201ENST00000615195 1269 ntBASIC29.85■■■□□ 2.37
MYCNP04198 DUX4L24-201ENST00000617576 1269 ntBASIC29.85■■■□□ 2.37
MYCNP04198 DUX4L22-201ENST00000618238 1269 ntBASIC29.85■■■□□ 2.37
MYCNP04198 DUX4L20-201ENST00000619712 1269 ntBASIC29.85■■■□□ 2.37
MYCNP04198 DUX4L21-201ENST00000622058 1269 ntBASIC29.85■■■□□ 2.37
MYCNP04198 DUX4L10-201ENST00000622460 1267 ntBASIC29.85■■■□□ 2.37
MYCNP04198 DUX4L25-201ENST00000624915 1269 ntBASIC29.85■■■□□ 2.37
MYCNP04198 HES6-205ENST00000409356 528 ntTSL 2 BASIC29.84■■■□□ 2.37
MYCNP04198 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC29.84■■■□□ 2.37
MYCNP04198 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
MYCNP04198 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
MYCNP04198 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
MYCNP04198 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC29.82■■■□□ 2.36
MYCNP04198 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC29.81■■■□□ 2.36
MYCNP04198 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
MYCNP04198 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
MYCNP04198 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC29.8■■■□□ 2.36
MYCNP04198 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC29.79■■■□□ 2.36
MYCNP04198 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
MYCNP04198 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC29.77■■■□□ 2.36
MYCNP04198 CHML-204ENST00000638121 920 ntTSL 2 BASIC29.76■■■□□ 2.35
MYCNP04198 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC29.76■■■□□ 2.35
MYCNP04198 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
MYCNP04198 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
MYCNP04198 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC29.75■■■□□ 2.35
MYCNP04198 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
MYCNP04198 EI24-212ENST00000615917 1407 ntTSL 2 BASIC29.74■■■□□ 2.35
MYCNP04198 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
MYCNP04198 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC29.73■■■□□ 2.35
MYCNP04198 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC29.73■■■□□ 2.35
MYCNP04198 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC29.73■■■□□ 2.35
MYCNP04198 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC29.72■■■□□ 2.35
MYCNP04198 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
MYCNP04198 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC29.72■■■□□ 2.35
MYCNP04198 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
MYCNP04198 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
MYCNP04198 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
MYCNP04198 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC29.71■■■□□ 2.35
MYCNP04198 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC29.71■■■□□ 2.35
MYCNP04198 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC29.71■■■□□ 2.35
MYCNP04198 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
MYCNP04198 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
MYCNP04198 CHST11-202ENST00000546689 756 ntTSL 2 BASIC29.68■■■□□ 2.34
MYCNP04198 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC29.67■■■□□ 2.34
MYCNP04198 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
MYCNP04198 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC29.66■■■□□ 2.34
MYCNP04198 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
MYCNP04198 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
MYCNP04198 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
MYCNP04198 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
MYCNP04198 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
MYCNP04198 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
MYCNP04198 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
MYCNP04198 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
MYCNP04198 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC29.65■■■□□ 2.34
MYCNP04198 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC29.65■■■□□ 2.34
MYCNP04198 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC29.65■■■□□ 2.34
MYCNP04198 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC29.64■■■□□ 2.34
MYCNP04198 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
MYCNP04198 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC29.63■■■□□ 2.33
MYCNP04198 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC29.62■■■□□ 2.33
MYCNP04198 RARRES2P2-201ENST00000394842 485 ntBASIC29.62■■■□□ 2.33
MYCNP04198 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC29.62■■■□□ 2.33
MYCNP04198 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
MYCNP04198 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC29.61■■■□□ 2.33
MYCNP04198 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
MYCNP04198 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC29.6■■■□□ 2.33
MYCNP04198 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
MYCNP04198 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
MYCNP04198 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC29.59■■■□□ 2.33
MYCNP04198 TPT1-202ENST00000379055 948 ntTSL 2 BASIC29.58■■■□□ 2.33
MYCNP04198 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
MYCNP04198 SRP68-213ENST00000629930 165 ntTSL 5 BASIC29.58■■■□□ 2.33
MYCNP04198 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC29.57■■■□□ 2.32
MYCNP04198 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC29.57■■■□□ 2.32
MYCNP04198 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
MYCNP04198 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
MYCNP04198 GPX1-201ENST00000419349 1106 ntBASIC29.57■■■□□ 2.32
MYCNP04198 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC29.56■■■□□ 2.32
MYCNP04198 AC120057.4-201ENST00000624722 1615 ntBASIC29.56■■■□□ 2.32
MYCNP04198 ABHD17AP5-201ENST00000580133 923 ntBASIC29.55■■■□□ 2.32
MYCNP04198 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC29.55■■■□□ 2.32
MYCNP04198 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
MYCNP04198 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
MYCNP04198 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
MYCNP04198 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC29.54■■■□□ 2.32
MYCNP04198 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
MYCNP04198 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
MYCNP04198 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
MYCNP04198 CEP120-209ENST00000515110 606 ntTSL 3 BASIC29.52■■■□□ 2.32
MYCNP04198 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
MYCNP04198 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC29.5■■■□□ 2.31
MYCNP04198 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC29.49■■■□□ 2.31
MYCNP04198 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC29.49■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms