Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RFPL1O75677 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
RFPL1O75677 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
RFPL1O75677 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC26.39■■□□□ 1.82
RFPL1O75677 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
RFPL1O75677 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.38■■□□□ 1.81
RFPL1O75677 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC26.38■■□□□ 1.81
RFPL1O75677 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.38■■□□□ 1.81
RFPL1O75677 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RFPL1O75677 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RFPL1O75677 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RFPL1O75677 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RFPL1O75677 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC26.36■■□□□ 1.81
RFPL1O75677 WASH5P-204ENST00000632292 975 ntBASIC26.35■■□□□ 1.81
RFPL1O75677 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
RFPL1O75677 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RFPL1O75677 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RFPL1O75677 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RFPL1O75677 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RFPL1O75677 AC142086.6-201ENST00000621154 1765 ntBASIC26.33■■□□□ 1.81
RFPL1O75677 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC26.33■■□□□ 1.81
RFPL1O75677 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.33■■□□□ 1.81
RFPL1O75677 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
RFPL1O75677 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RFPL1O75677 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RFPL1O75677 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RFPL1O75677 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
RFPL1O75677 AL139393.2-201ENST00000608721 2025 ntBASIC26.32■■□□□ 1.8
RFPL1O75677 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RFPL1O75677 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
RFPL1O75677 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RFPL1O75677 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
RFPL1O75677 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.3■■□□□ 1.8
RFPL1O75677 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RFPL1O75677 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
RFPL1O75677 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
RFPL1O75677 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC26.29■■□□□ 1.8
RFPL1O75677 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RFPL1O75677 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RFPL1O75677 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.27■■□□□ 1.8
RFPL1O75677 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RFPL1O75677 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RFPL1O75677 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RFPL1O75677 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.26■■□□□ 1.79
RFPL1O75677 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RFPL1O75677 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RFPL1O75677 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
RFPL1O75677 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RFPL1O75677 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RFPL1O75677 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RFPL1O75677 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RFPL1O75677 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RFPL1O75677 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
RFPL1O75677 AL133380.1-201ENST00000506013 324 ntBASIC26.22■■□□□ 1.79
RFPL1O75677 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
RFPL1O75677 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RFPL1O75677 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
RFPL1O75677 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.2■■□□□ 1.79
RFPL1O75677 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC26.19■■□□□ 1.78
RFPL1O75677 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RFPL1O75677 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RFPL1O75677 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.17■■□□□ 1.78
RFPL1O75677 DRD5P2-201ENST00000421395 2012 ntBASIC26.17■■□□□ 1.78
RFPL1O75677 CAHM-201ENST00000604200 896 ntBASIC26.17■■□□□ 1.78
RFPL1O75677 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RFPL1O75677 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
RFPL1O75677 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RFPL1O75677 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC26.15■■□□□ 1.78
RFPL1O75677 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RFPL1O75677 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
RFPL1O75677 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
RFPL1O75677 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
RFPL1O75677 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
RFPL1O75677 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RFPL1O75677 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.12■■□□□ 1.77
RFPL1O75677 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.11■■□□□ 1.77
RFPL1O75677 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC26.11■■□□□ 1.77
RFPL1O75677 AP006261.1-201ENST00000584783 668 ntBASIC26.11■■□□□ 1.77
RFPL1O75677 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
RFPL1O75677 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
RFPL1O75677 AC010864.1-201ENST00000609407 1511 ntBASIC26.1■■□□□ 1.77
RFPL1O75677 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.1■■□□□ 1.77
RFPL1O75677 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RFPL1O75677 AL391121.1-201ENST00000607967 1349 ntBASIC26.1■■□□□ 1.77
RFPL1O75677 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
RFPL1O75677 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
RFPL1O75677 AL162393.1-201ENST00000437852 946 ntBASIC26.09■■□□□ 1.77
RFPL1O75677 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
RFPL1O75677 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.76
RFPL1O75677 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RFPL1O75677 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
RFPL1O75677 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RFPL1O75677 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
RFPL1O75677 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RFPL1O75677 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
RFPL1O75677 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
RFPL1O75677 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.03■■□□□ 1.76
RFPL1O75677 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
RFPL1O75677 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC26.03■■□□□ 1.76
RFPL1O75677 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 179 ms