Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC25.4■■□□□ 1.66
SNRNP200O75643 AL135925.1-201ENST00000605920 1701 ntBASIC25.4■■□□□ 1.66
SNRNP200O75643 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SNRNP200O75643 AC010864.1-201ENST00000609407 1511 ntBASIC25.39■■□□□ 1.66
SNRNP200O75643 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC25.38■■□□□ 1.65
SNRNP200O75643 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SNRNP200O75643 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SNRNP200O75643 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SNRNP200O75643 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
SNRNP200O75643 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC25.36■■□□□ 1.65
SNRNP200O75643 AC108673.1-201ENST00000510422 1159 ntBASIC25.36■■□□□ 1.65
SNRNP200O75643 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SNRNP200O75643 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC25.35■■□□□ 1.65
SNRNP200O75643 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
SNRNP200O75643 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SNRNP200O75643 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
SNRNP200O75643 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SNRNP200O75643 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC25.33■■□□□ 1.65
SNRNP200O75643 MLEC-202ENST00000412616 841 ntTSL 3 BASIC25.33■■□□□ 1.65
SNRNP200O75643 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC25.33■■□□□ 1.65
SNRNP200O75643 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
SNRNP200O75643 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
SNRNP200O75643 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC25.32■■□□□ 1.64
SNRNP200O75643 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SNRNP200O75643 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SNRNP200O75643 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SNRNP200O75643 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
SNRNP200O75643 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC25.31■■□□□ 1.64
SNRNP200O75643 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SNRNP200O75643 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
SNRNP200O75643 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
SNRNP200O75643 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SNRNP200O75643 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
SNRNP200O75643 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SNRNP200O75643 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
SNRNP200O75643 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC25.3■■□□□ 1.64
SNRNP200O75643 ABCB10P1-201ENST00000614297 2181 ntBASIC25.29■■□□□ 1.64
SNRNP200O75643 MIR6090-201ENST00000622481 60 ntBASIC25.29■■□□□ 1.64
SNRNP200O75643 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SNRNP200O75643 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC25.28■■□□□ 1.64
SNRNP200O75643 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC25.28■■□□□ 1.64
SNRNP200O75643 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC25.28■■□□□ 1.64
SNRNP200O75643 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SNRNP200O75643 HGH1-207ENST00000628266 258 ntTSL 5 BASIC25.28■■□□□ 1.64
SNRNP200O75643 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25.27■■□□□ 1.64
SNRNP200O75643 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC25.26■■□□□ 1.63
SNRNP200O75643 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SNRNP200O75643 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
SNRNP200O75643 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
SNRNP200O75643 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
SNRNP200O75643 ST7-AS1-201ENST00000456775 1889 ntBASIC25.24■■□□□ 1.63
SNRNP200O75643 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
SNRNP200O75643 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
SNRNP200O75643 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC25.24■■□□□ 1.63
SNRNP200O75643 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SNRNP200O75643 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SNRNP200O75643 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
SNRNP200O75643 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
SNRNP200O75643 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SNRNP200O75643 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.2■■□□□ 1.62
SNRNP200O75643 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC25.2■■□□□ 1.62
SNRNP200O75643 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC25.2■■□□□ 1.62
SNRNP200O75643 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.2■■□□□ 1.62
SNRNP200O75643 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SNRNP200O75643 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
SNRNP200O75643 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SNRNP200O75643 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SNRNP200O75643 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
SNRNP200O75643 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
SNRNP200O75643 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.16■■□□□ 1.62
SNRNP200O75643 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SNRNP200O75643 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SNRNP200O75643 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC25.16■■□□□ 1.62
SNRNP200O75643 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SNRNP200O75643 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC25.16■■□□□ 1.62
SNRNP200O75643 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC25.16■■□□□ 1.62
SNRNP200O75643 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC25.16■■□□□ 1.62
SNRNP200O75643 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
SNRNP200O75643 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SNRNP200O75643 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.14■■□□□ 1.62
SNRNP200O75643 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SNRNP200O75643 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.61
SNRNP200O75643 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC25.14■■□□□ 1.61
SNRNP200O75643 ABHD17AP4-201ENST00000411545 909 ntBASIC25.13■■□□□ 1.61
SNRNP200O75643 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SNRNP200O75643 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC25.12■■□□□ 1.61
SNRNP200O75643 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.12■■□□□ 1.61
SNRNP200O75643 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SNRNP200O75643 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SNRNP200O75643 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
SNRNP200O75643 CIB2-204ENST00000557846 934 ntTSL 3 BASIC25.1■■□□□ 1.61
SNRNP200O75643 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
SNRNP200O75643 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
SNRNP200O75643 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SNRNP200O75643 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SNRNP200O75643 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC25.09■■□□□ 1.61
SNRNP200O75643 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC25.09■■□□□ 1.61
SNRNP200O75643 LINC00273-201ENST00000539813 1452 ntBASIC25.08■■□□□ 1.61
SNRNP200O75643 DUX4L29-201ENST00000425409 679 ntBASIC25.07■■□□□ 1.6
SNRNP200O75643 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms