Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CDX4O14627 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC26.09■■□□□ 1.77
CDX4O14627 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CDX4O14627 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.08■■□□□ 1.77
CDX4O14627 ABHD17AP5-201ENST00000580133 923 ntBASIC26.08■■□□□ 1.77
CDX4O14627 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.08■■□□□ 1.77
CDX4O14627 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
CDX4O14627 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CDX4O14627 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CDX4O14627 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CDX4O14627 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CDX4O14627 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CDX4O14627 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
CDX4O14627 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
CDX4O14627 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
CDX4O14627 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CDX4O14627 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CDX4O14627 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC26.06■■□□□ 1.76
CDX4O14627 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CDX4O14627 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.03■■□□□ 1.76
CDX4O14627 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CDX4O14627 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CDX4O14627 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CDX4O14627 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CDX4O14627 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.01■■□□□ 1.75
CDX4O14627 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CDX4O14627 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC26.01■■□□□ 1.75
CDX4O14627 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CDX4O14627 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
CDX4O14627 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26■■□□□ 1.75
CDX4O14627 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26■■□□□ 1.75
CDX4O14627 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC26■■□□□ 1.75
CDX4O14627 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC26■■□□□ 1.75
CDX4O14627 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
CDX4O14627 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.99■■□□□ 1.75
CDX4O14627 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CDX4O14627 GPX1-201ENST00000419349 1106 ntBASIC25.99■■□□□ 1.75
CDX4O14627 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CDX4O14627 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CDX4O14627 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CDX4O14627 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CDX4O14627 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CDX4O14627 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CDX4O14627 RNF126P1-201ENST00000567452 1320 ntBASIC25.95■■□□□ 1.75
CDX4O14627 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
CDX4O14627 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25.95■■□□□ 1.74
CDX4O14627 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.74
CDX4O14627 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CDX4O14627 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC25.93■■□□□ 1.74
CDX4O14627 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
CDX4O14627 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CDX4O14627 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC25.91■■□□□ 1.74
CDX4O14627 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC25.91■■□□□ 1.74
CDX4O14627 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
CDX4O14627 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC25.9■■□□□ 1.74
CDX4O14627 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.9■■□□□ 1.74
CDX4O14627 TPT1-202ENST00000379055 948 ntTSL 2 BASIC25.89■■□□□ 1.74
CDX4O14627 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC25.89■■□□□ 1.74
CDX4O14627 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CDX4O14627 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
CDX4O14627 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.87■■□□□ 1.73
CDX4O14627 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC25.86■■□□□ 1.73
CDX4O14627 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25.86■■□□□ 1.73
CDX4O14627 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CDX4O14627 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25.85■■□□□ 1.73
CDX4O14627 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
CDX4O14627 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CDX4O14627 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
CDX4O14627 CEP120-209ENST00000515110 606 ntTSL 3 BASIC25.83■■□□□ 1.73
CDX4O14627 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
CDX4O14627 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
CDX4O14627 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CDX4O14627 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CDX4O14627 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
CDX4O14627 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
CDX4O14627 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
CDX4O14627 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC25.8■■□□□ 1.72
CDX4O14627 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CDX4O14627 NTF6A-201ENST00000591175 560 ntBASIC25.79■■□□□ 1.72
CDX4O14627 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
CDX4O14627 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC25.78■■□□□ 1.72
CDX4O14627 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC25.78■■□□□ 1.72
CDX4O14627 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CDX4O14627 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CDX4O14627 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
CDX4O14627 AC012354.3-201ENST00000623734 483 ntBASIC25.76■■□□□ 1.71
CDX4O14627 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC25.76■■□□□ 1.71
CDX4O14627 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC25.76■■□□□ 1.71
CDX4O14627 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
CDX4O14627 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.75■■□□□ 1.71
CDX4O14627 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CDX4O14627 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC25.75■■□□□ 1.71
CDX4O14627 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CDX4O14627 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC25.75■■□□□ 1.71
CDX4O14627 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CDX4O14627 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CDX4O14627 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC25.72■■□□□ 1.71
CDX4O14627 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC25.72■■□□□ 1.71
CDX4O14627 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC25.72■■□□□ 1.71
CDX4O14627 AC022413.1-201ENST00000624602 984 ntBASIC25.71■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms