Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 DUX4L11-201ENST00000611504 1267 ntBASIC26.22■■□□□ 1.79
TLR4O00206 DUX4L12-201ENST00000614593 1267 ntBASIC26.22■■□□□ 1.79
TLR4O00206 DUX4L14-201ENST00000621227 1267 ntBASIC26.22■■□□□ 1.79
TLR4O00206 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.22■■□□□ 1.79
TLR4O00206 AC016575.1-201ENST00000607026 382 ntBASIC26.21■■□□□ 1.79
TLR4O00206 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
TLR4O00206 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
TLR4O00206 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
TLR4O00206 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
TLR4O00206 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.18■■□□□ 1.78
TLR4O00206 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
TLR4O00206 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.17■■□□□ 1.78
TLR4O00206 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
TLR4O00206 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
TLR4O00206 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.15■■□□□ 1.78
TLR4O00206 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
TLR4O00206 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.14■■□□□ 1.78
TLR4O00206 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.14■■□□□ 1.78
TLR4O00206 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC26.14■■□□□ 1.77
TLR4O00206 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.13■■□□□ 1.77
TLR4O00206 CR559946.2-201ENST00000623684 991 ntBASIC26.13■■□□□ 1.77
TLR4O00206 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TLR4O00206 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TLR4O00206 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
TLR4O00206 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
TLR4O00206 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
TLR4O00206 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
TLR4O00206 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
TLR4O00206 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.09■■□□□ 1.77
TLR4O00206 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
TLR4O00206 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
TLR4O00206 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
TLR4O00206 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.76
TLR4O00206 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
TLR4O00206 EI24-212ENST00000615917 1407 ntTSL 2 BASIC26.07■■□□□ 1.76
TLR4O00206 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
TLR4O00206 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
TLR4O00206 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
TLR4O00206 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.06■■□□□ 1.76
TLR4O00206 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
TLR4O00206 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
TLR4O00206 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
TLR4O00206 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
TLR4O00206 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
TLR4O00206 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
TLR4O00206 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
TLR4O00206 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
TLR4O00206 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
TLR4O00206 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
TLR4O00206 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
TLR4O00206 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC26.02■■□□□ 1.76
TLR4O00206 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.02■■□□□ 1.76
TLR4O00206 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC26.02■■□□□ 1.76
TLR4O00206 AL161658.1-201ENST00000623641 1967 ntBASIC26.02■■□□□ 1.76
TLR4O00206 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
TLR4O00206 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
TLR4O00206 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
TLR4O00206 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
TLR4O00206 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC26.01■■□□□ 1.75
TLR4O00206 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
TLR4O00206 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
TLR4O00206 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
TLR4O00206 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
TLR4O00206 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC26■■□□□ 1.75
TLR4O00206 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
TLR4O00206 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.99■■□□□ 1.75
TLR4O00206 DUX4L13-201ENST00000554103 1267 ntBASIC25.99■■□□□ 1.75
TLR4O00206 DUX4L15-201ENST00000611059 1267 ntBASIC25.99■■□□□ 1.75
TLR4O00206 DUX4L23-201ENST00000615195 1269 ntBASIC25.99■■□□□ 1.75
TLR4O00206 DUX4L24-201ENST00000617576 1269 ntBASIC25.99■■□□□ 1.75
TLR4O00206 DUX4L22-201ENST00000618238 1269 ntBASIC25.99■■□□□ 1.75
TLR4O00206 DUX4L20-201ENST00000619712 1269 ntBASIC25.99■■□□□ 1.75
TLR4O00206 DUX4L21-201ENST00000622058 1269 ntBASIC25.99■■□□□ 1.75
TLR4O00206 DUX4L10-201ENST00000622460 1267 ntBASIC25.99■■□□□ 1.75
TLR4O00206 DUX4L25-201ENST00000624915 1269 ntBASIC25.99■■□□□ 1.75
TLR4O00206 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.98■■□□□ 1.75
TLR4O00206 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC25.98■■□□□ 1.75
TLR4O00206 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC25.97■■□□□ 1.75
TLR4O00206 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
TLR4O00206 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
TLR4O00206 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
TLR4O00206 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
TLR4O00206 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.95■■□□□ 1.74
TLR4O00206 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
TLR4O00206 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
TLR4O00206 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
TLR4O00206 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
TLR4O00206 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
TLR4O00206 HES6-205ENST00000409356 528 ntTSL 2 BASIC25.91■■□□□ 1.74
TLR4O00206 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
TLR4O00206 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC25.91■■□□□ 1.74
TLR4O00206 HSD17B1P1-201ENST00000590052 955 ntBASIC25.91■■□□□ 1.74
TLR4O00206 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.91■■□□□ 1.74
TLR4O00206 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.9■■□□□ 1.74
TLR4O00206 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.89■■□□□ 1.74
TLR4O00206 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC25.89■■□□□ 1.74
TLR4O00206 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
TLR4O00206 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
TLR4O00206 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.88■■□□□ 1.73
TLR4O00206 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC25.87■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms