Protein–RNA interactions for Protein: B0FP48

UPK3BL1, Uroplakin-3b-like protein 1, humanhuman

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1B0FP48 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC26.68■■□□□ 1.86
UPK3BL1B0FP48 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.68■■□□□ 1.86
UPK3BL1B0FP48 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC26.68■■□□□ 1.86
UPK3BL1B0FP48 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
UPK3BL1B0FP48 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
UPK3BL1B0FP48 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
UPK3BL1B0FP48 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
UPK3BL1B0FP48 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
UPK3BL1B0FP48 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
UPK3BL1B0FP48 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
UPK3BL1B0FP48 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
UPK3BL1B0FP48 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.86
UPK3BL1B0FP48 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.64■■□□□ 1.86
UPK3BL1B0FP48 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
UPK3BL1B0FP48 AC021231.2-201ENST00000594613 730 ntBASIC26.63■■□□□ 1.85
UPK3BL1B0FP48 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
UPK3BL1B0FP48 ST7-205ENST00000393446 2114 ntTSL 5 BASIC26.62■■□□□ 1.85
UPK3BL1B0FP48 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
UPK3BL1B0FP48 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
UPK3BL1B0FP48 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
UPK3BL1B0FP48 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.61■■□□□ 1.85
UPK3BL1B0FP48 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.61■■□□□ 1.85
UPK3BL1B0FP48 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
UPK3BL1B0FP48 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
UPK3BL1B0FP48 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.59■■□□□ 1.85
UPK3BL1B0FP48 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.58■■□□□ 1.85
UPK3BL1B0FP48 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
UPK3BL1B0FP48 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC26.58■■□□□ 1.85
UPK3BL1B0FP48 MIR3648-2-201ENST00000581792 180 ntBASIC26.58■■□□□ 1.85
UPK3BL1B0FP48 MIR3648-1-201ENST00000615959 180 ntBASIC26.58■■□□□ 1.85
UPK3BL1B0FP48 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
UPK3BL1B0FP48 AC108673.1-201ENST00000510422 1159 ntBASIC26.57■■□□□ 1.84
UPK3BL1B0FP48 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
UPK3BL1B0FP48 HSD17B1P1-201ENST00000590052 955 ntBASIC26.57■■□□□ 1.84
UPK3BL1B0FP48 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC26.57■■□□□ 1.84
UPK3BL1B0FP48 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
UPK3BL1B0FP48 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
UPK3BL1B0FP48 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC26.56■■□□□ 1.84
UPK3BL1B0FP48 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
UPK3BL1B0FP48 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
UPK3BL1B0FP48 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
UPK3BL1B0FP48 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
UPK3BL1B0FP48 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
UPK3BL1B0FP48 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.54■■□□□ 1.84
UPK3BL1B0FP48 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.54■■□□□ 1.84
UPK3BL1B0FP48 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
UPK3BL1B0FP48 MIR6090-201ENST00000622481 60 ntBASIC26.53■■□□□ 1.84
UPK3BL1B0FP48 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.53■■□□□ 1.84
UPK3BL1B0FP48 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
UPK3BL1B0FP48 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
UPK3BL1B0FP48 AC016575.1-201ENST00000607026 382 ntBASIC26.52■■□□□ 1.84
UPK3BL1B0FP48 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC26.52■■□□□ 1.84
UPK3BL1B0FP48 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.51■■□□□ 1.83
UPK3BL1B0FP48 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.51■■□□□ 1.83
UPK3BL1B0FP48 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.5■■□□□ 1.83
UPK3BL1B0FP48 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
UPK3BL1B0FP48 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
UPK3BL1B0FP48 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.5■■□□□ 1.83
UPK3BL1B0FP48 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
UPK3BL1B0FP48 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
UPK3BL1B0FP48 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC26.49■■□□□ 1.83
UPK3BL1B0FP48 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC26.48■■□□□ 1.83
UPK3BL1B0FP48 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
UPK3BL1B0FP48 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.47■■□□□ 1.83
UPK3BL1B0FP48 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
UPK3BL1B0FP48 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
UPK3BL1B0FP48 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.47■■□□□ 1.83
UPK3BL1B0FP48 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.47■■□□□ 1.83
UPK3BL1B0FP48 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.47■■□□□ 1.83
UPK3BL1B0FP48 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
UPK3BL1B0FP48 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
UPK3BL1B0FP48 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.46■■□□□ 1.83
UPK3BL1B0FP48 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC26.46■■□□□ 1.83
UPK3BL1B0FP48 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC26.46■■□□□ 1.83
UPK3BL1B0FP48 AC010864.1-201ENST00000609407 1511 ntBASIC26.45■■□□□ 1.83
UPK3BL1B0FP48 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.44■■□□□ 1.82
UPK3BL1B0FP48 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC26.44■■□□□ 1.82
UPK3BL1B0FP48 LINC01971-201ENST00000617888 1048 ntBASIC26.44■■□□□ 1.82
UPK3BL1B0FP48 BRD4-212ENST00000630599 726 ntTSL 2 BASIC26.44■■□□□ 1.82
UPK3BL1B0FP48 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
UPK3BL1B0FP48 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
UPK3BL1B0FP48 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.43■■□□□ 1.82
UPK3BL1B0FP48 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC26.43■■□□□ 1.82
UPK3BL1B0FP48 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
UPK3BL1B0FP48 DUX4L11-201ENST00000611504 1267 ntBASIC26.42■■□□□ 1.82
UPK3BL1B0FP48 DUX4L12-201ENST00000614593 1267 ntBASIC26.42■■□□□ 1.82
UPK3BL1B0FP48 DUX4L14-201ENST00000621227 1267 ntBASIC26.42■■□□□ 1.82
UPK3BL1B0FP48 AL135925.1-201ENST00000605920 1701 ntBASIC26.4■■□□□ 1.82
UPK3BL1B0FP48 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
UPK3BL1B0FP48 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
UPK3BL1B0FP48 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
UPK3BL1B0FP48 CR559946.2-201ENST00000623684 991 ntBASIC26.39■■□□□ 1.82
UPK3BL1B0FP48 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
UPK3BL1B0FP48 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
UPK3BL1B0FP48 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
UPK3BL1B0FP48 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
UPK3BL1B0FP48 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
UPK3BL1B0FP48 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
UPK3BL1B0FP48 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
UPK3BL1B0FP48 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC26.36■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms