Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
IGHV4-28A0A0C4DH34 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
IGHV4-28A0A0C4DH34 DUX4L29-201ENST00000425409 679 ntBASIC19■□□□□ 0.63
IGHV4-28A0A0C4DH34 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
IGHV4-28A0A0C4DH34 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
IGHV4-28A0A0C4DH34 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
IGHV4-28A0A0C4DH34 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
IGHV4-28A0A0C4DH34 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
IGHV4-28A0A0C4DH34 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
IGHV4-28A0A0C4DH34 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC18.98■□□□□ 0.63
IGHV4-28A0A0C4DH34 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC18.98■□□□□ 0.63
IGHV4-28A0A0C4DH34 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
IGHV4-28A0A0C4DH34 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
IGHV4-28A0A0C4DH34 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
IGHV4-28A0A0C4DH34 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
IGHV4-28A0A0C4DH34 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC18.96■□□□□ 0.63
IGHV4-28A0A0C4DH34 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC18.96■□□□□ 0.63
IGHV4-28A0A0C4DH34 HGH1-207ENST00000628266 258 ntTSL 5 BASIC18.96■□□□□ 0.63
IGHV4-28A0A0C4DH34 AC021231.2-201ENST00000594613 730 ntBASIC18.95■□□□□ 0.62
IGHV4-28A0A0C4DH34 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IGHV4-28A0A0C4DH34 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
IGHV4-28A0A0C4DH34 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IGHV4-28A0A0C4DH34 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IGHV4-28A0A0C4DH34 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC18.94■□□□□ 0.62
IGHV4-28A0A0C4DH34 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
IGHV4-28A0A0C4DH34 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC18.94■□□□□ 0.62
IGHV4-28A0A0C4DH34 AC010864.1-201ENST00000609407 1511 ntBASIC18.94■□□□□ 0.62
IGHV4-28A0A0C4DH34 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
IGHV4-28A0A0C4DH34 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
IGHV4-28A0A0C4DH34 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IGHV4-28A0A0C4DH34 MIR7108-201ENST00000614319 87 ntBASIC18.93■□□□□ 0.62
IGHV4-28A0A0C4DH34 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
IGHV4-28A0A0C4DH34 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
IGHV4-28A0A0C4DH34 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
IGHV4-28A0A0C4DH34 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
IGHV4-28A0A0C4DH34 ZNRF2P2-203ENST00000454624 420 ntBASIC18.92■□□□□ 0.62
IGHV4-28A0A0C4DH34 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
IGHV4-28A0A0C4DH34 ST7-205ENST00000393446 2114 ntTSL 5 BASIC18.92■□□□□ 0.62
IGHV4-28A0A0C4DH34 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
IGHV4-28A0A0C4DH34 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
IGHV4-28A0A0C4DH34 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
IGHV4-28A0A0C4DH34 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IGHV4-28A0A0C4DH34 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IGHV4-28A0A0C4DH34 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IGHV4-28A0A0C4DH34 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC18.89■□□□□ 0.61
IGHV4-28A0A0C4DH34 ST7-202ENST00000323984 2142 ntTSL 5 BASIC18.89■□□□□ 0.61
IGHV4-28A0A0C4DH34 ST7-207ENST00000393449 2127 ntTSL 5 BASIC18.89■□□□□ 0.61
IGHV4-28A0A0C4DH34 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
IGHV4-28A0A0C4DH34 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC18.88■□□□□ 0.61
IGHV4-28A0A0C4DH34 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
IGHV4-28A0A0C4DH34 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
IGHV4-28A0A0C4DH34 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
IGHV4-28A0A0C4DH34 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
IGHV4-28A0A0C4DH34 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC18.87■□□□□ 0.61
IGHV4-28A0A0C4DH34 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC18.87■□□□□ 0.61
IGHV4-28A0A0C4DH34 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
IGHV4-28A0A0C4DH34 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
IGHV4-28A0A0C4DH34 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC18.86■□□□□ 0.61
IGHV4-28A0A0C4DH34 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC18.86■□□□□ 0.61
IGHV4-28A0A0C4DH34 PVT1-219ENST00000523427 938 ntTSL 3 BASIC18.86■□□□□ 0.61
IGHV4-28A0A0C4DH34 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC18.86■□□□□ 0.61
IGHV4-28A0A0C4DH34 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
IGHV4-28A0A0C4DH34 AL135925.1-201ENST00000605920 1701 ntBASIC18.86■□□□□ 0.61
IGHV4-28A0A0C4DH34 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC18.85■□□□□ 0.61
IGHV4-28A0A0C4DH34 EI24-212ENST00000615917 1407 ntTSL 2 BASIC18.85■□□□□ 0.61
IGHV4-28A0A0C4DH34 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
IGHV4-28A0A0C4DH34 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC18.85■□□□□ 0.61
IGHV4-28A0A0C4DH34 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
IGHV4-28A0A0C4DH34 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
IGHV4-28A0A0C4DH34 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
IGHV4-28A0A0C4DH34 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IGHV4-28A0A0C4DH34 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC18.83■□□□□ 0.61
IGHV4-28A0A0C4DH34 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
IGHV4-28A0A0C4DH34 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
IGHV4-28A0A0C4DH34 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
IGHV4-28A0A0C4DH34 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
IGHV4-28A0A0C4DH34 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IGHV4-28A0A0C4DH34 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
IGHV4-28A0A0C4DH34 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IGHV4-28A0A0C4DH34 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IGHV4-28A0A0C4DH34 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IGHV4-28A0A0C4DH34 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
IGHV4-28A0A0C4DH34 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
IGHV4-28A0A0C4DH34 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
IGHV4-28A0A0C4DH34 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
IGHV4-28A0A0C4DH34 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
IGHV4-28A0A0C4DH34 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC18.78■□□□□ 0.6
IGHV4-28A0A0C4DH34 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
IGHV4-28A0A0C4DH34 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC18.77■□□□□ 0.6
IGHV4-28A0A0C4DH34 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
IGHV4-28A0A0C4DH34 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IGHV4-28A0A0C4DH34 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IGHV4-28A0A0C4DH34 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
IGHV4-28A0A0C4DH34 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
IGHV4-28A0A0C4DH34 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
IGHV4-28A0A0C4DH34 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IGHV4-28A0A0C4DH34 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC18.75■□□□□ 0.59
IGHV4-28A0A0C4DH34 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
IGHV4-28A0A0C4DH34 LINC01971-201ENST00000617888 1048 ntBASIC18.75■□□□□ 0.59
IGHV4-28A0A0C4DH34 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms