Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV21A0A0B4J279 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV21A0A0B4J279 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC19.42■□□□□ 0.7
TRAV21A0A0B4J279 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC19.42■□□□□ 0.7
TRAV21A0A0B4J279 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC19.42■□□□□ 0.7
TRAV21A0A0B4J279 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV21A0A0B4J279 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAV21A0A0B4J279 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TRAV21A0A0B4J279 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV21A0A0B4J279 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC19.41■□□□□ 0.7
TRAV21A0A0B4J279 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV21A0A0B4J279 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV21A0A0B4J279 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAV21A0A0B4J279 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV21A0A0B4J279 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV21A0A0B4J279 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
TRAV21A0A0B4J279 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV21A0A0B4J279 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
TRAV21A0A0B4J279 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV21A0A0B4J279 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV21A0A0B4J279 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
TRAV21A0A0B4J279 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
TRAV21A0A0B4J279 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV21A0A0B4J279 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TRAV21A0A0B4J279 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV21A0A0B4J279 AL139393.2-201ENST00000608721 2025 ntBASIC19.37■□□□□ 0.69
TRAV21A0A0B4J279 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV21A0A0B4J279 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TRAV21A0A0B4J279 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
TRAV21A0A0B4J279 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV21A0A0B4J279 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV21A0A0B4J279 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV21A0A0B4J279 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV21A0A0B4J279 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
TRAV21A0A0B4J279 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV21A0A0B4J279 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV21A0A0B4J279 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV21A0A0B4J279 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV21A0A0B4J279 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TRAV21A0A0B4J279 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV21A0A0B4J279 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC19.31■□□□□ 0.68
TRAV21A0A0B4J279 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC19.31■□□□□ 0.68
TRAV21A0A0B4J279 AC010864.1-201ENST00000609407 1511 ntBASIC19.3■□□□□ 0.68
TRAV21A0A0B4J279 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV21A0A0B4J279 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV21A0A0B4J279 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC19.3■□□□□ 0.68
TRAV21A0A0B4J279 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC19.28■□□□□ 0.68
TRAV21A0A0B4J279 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV21A0A0B4J279 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC19.28■□□□□ 0.68
TRAV21A0A0B4J279 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV21A0A0B4J279 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC19.27■□□□□ 0.68
TRAV21A0A0B4J279 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV21A0A0B4J279 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC19.26■□□□□ 0.67
TRAV21A0A0B4J279 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV21A0A0B4J279 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
TRAV21A0A0B4J279 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV21A0A0B4J279 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
TRAV21A0A0B4J279 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TRAV21A0A0B4J279 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV21A0A0B4J279 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV21A0A0B4J279 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.25■□□□□ 0.67
TRAV21A0A0B4J279 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
TRAV21A0A0B4J279 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV21A0A0B4J279 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV21A0A0B4J279 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV21A0A0B4J279 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV21A0A0B4J279 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC19.24■□□□□ 0.67
TRAV21A0A0B4J279 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TRAV21A0A0B4J279 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV21A0A0B4J279 DRD5P2-201ENST00000421395 2012 ntBASIC19.24■□□□□ 0.67
TRAV21A0A0B4J279 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV21A0A0B4J279 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
TRAV21A0A0B4J279 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC19.23■□□□□ 0.67
TRAV21A0A0B4J279 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TRAV21A0A0B4J279 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC19.23■□□□□ 0.67
TRAV21A0A0B4J279 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV21A0A0B4J279 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV21A0A0B4J279 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV21A0A0B4J279 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV21A0A0B4J279 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TRAV21A0A0B4J279 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
TRAV21A0A0B4J279 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.2■□□□□ 0.66
TRAV21A0A0B4J279 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TRAV21A0A0B4J279 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV21A0A0B4J279 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV21A0A0B4J279 RARRES2P7-201ENST00000567349 469 ntBASIC19.2■□□□□ 0.66
TRAV21A0A0B4J279 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV21A0A0B4J279 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV21A0A0B4J279 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV21A0A0B4J279 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV21A0A0B4J279 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV21A0A0B4J279 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC19.18■□□□□ 0.66
TRAV21A0A0B4J279 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV21A0A0B4J279 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV21A0A0B4J279 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV21A0A0B4J279 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV21A0A0B4J279 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV21A0A0B4J279 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV21A0A0B4J279 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV21A0A0B4J279 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 204 ms