Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SFTPBP07988 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SFTPBP07988 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.71■□□□□ 0.43
SFTPBP07988 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SFTPBP07988 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.71■□□□□ 0.42
SFTPBP07988 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.71■□□□□ 0.42
SFTPBP07988 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SFTPBP07988 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.7■□□□□ 0.42
SFTPBP07988 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SFTPBP07988 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.7■□□□□ 0.42
SFTPBP07988 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SFTPBP07988 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SFTPBP07988 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SFTPBP07988 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SFTPBP07988 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.7■□□□□ 0.42
SFTPBP07988 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.7■□□□□ 0.42
SFTPBP07988 AC053503.5-201ENST00000601508 636 ntBASIC17.7■□□□□ 0.42
SFTPBP07988 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.7■□□□□ 0.42
SFTPBP07988 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SFTPBP07988 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SFTPBP07988 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SFTPBP07988 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.7■□□□□ 0.42
SFTPBP07988 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SFTPBP07988 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SFTPBP07988 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SFTPBP07988 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SFTPBP07988 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SFTPBP07988 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
SFTPBP07988 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SFTPBP07988 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SFTPBP07988 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SFTPBP07988 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.69■□□□□ 0.42
SFTPBP07988 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SFTPBP07988 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SFTPBP07988 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SFTPBP07988 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SFTPBP07988 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SFTPBP07988 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.69■□□□□ 0.42
SFTPBP07988 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.69■□□□□ 0.42
SFTPBP07988 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.69■□□□□ 0.42
SFTPBP07988 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SFTPBP07988 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SFTPBP07988 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SFTPBP07988 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.69■□□□□ 0.42
SFTPBP07988 AC121338.2-201ENST00000622535 1744 ntBASIC17.69■□□□□ 0.42
SFTPBP07988 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SFTPBP07988 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SFTPBP07988 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SFTPBP07988 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SFTPBP07988 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.69■□□□□ 0.42
SFTPBP07988 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SFTPBP07988 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SFTPBP07988 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SFTPBP07988 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SFTPBP07988 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.68■□□□□ 0.42
SFTPBP07988 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SFTPBP07988 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.68■□□□□ 0.42
SFTPBP07988 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
SFTPBP07988 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SFTPBP07988 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.68■□□□□ 0.42
SFTPBP07988 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.68■□□□□ 0.42
SFTPBP07988 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.68■□□□□ 0.42
SFTPBP07988 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.68■□□□□ 0.42
SFTPBP07988 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SFTPBP07988 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SFTPBP07988 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SFTPBP07988 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SFTPBP07988 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SFTPBP07988 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SFTPBP07988 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SFTPBP07988 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SFTPBP07988 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SFTPBP07988 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.67■□□□□ 0.42
SFTPBP07988 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SFTPBP07988 AC061975.6-201ENST00000579045 1553 ntBASIC17.67■□□□□ 0.42
SFTPBP07988 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SFTPBP07988 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SFTPBP07988 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.67■□□□□ 0.42
SFTPBP07988 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.67■□□□□ 0.42
SFTPBP07988 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
SFTPBP07988 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SFTPBP07988 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.67■□□□□ 0.42
SFTPBP07988 KRT18P61-201ENST00000585825 1298 ntBASIC17.67■□□□□ 0.42
SFTPBP07988 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SFTPBP07988 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SFTPBP07988 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.67■□□□□ 0.42
SFTPBP07988 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SFTPBP07988 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SFTPBP07988 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SFTPBP07988 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SFTPBP07988 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SFTPBP07988 AL391422.3-201ENST00000603791 2761 ntBASIC17.67■□□□□ 0.42
SFTPBP07988 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SFTPBP07988 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SFTPBP07988 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SFTPBP07988 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SFTPBP07988 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SFTPBP07988 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SFTPBP07988 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SFTPBP07988 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms