Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HAPLN3Q96S86 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.26■□□□□ 0.99
HAPLN3Q96S86 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.26■□□□□ 0.99
HAPLN3Q96S86 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.26■□□□□ 0.99
HAPLN3Q96S86 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
HAPLN3Q96S86 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HAPLN3Q96S86 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HAPLN3Q96S86 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
HAPLN3Q96S86 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.26■□□□□ 0.99
HAPLN3Q96S86 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
HAPLN3Q96S86 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HAPLN3Q96S86 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HAPLN3Q96S86 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.25■□□□□ 0.99
HAPLN3Q96S86 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
HAPLN3Q96S86 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.25■□□□□ 0.99
HAPLN3Q96S86 NCF1B-203ENST00000435988 1254 ntBASIC21.25■□□□□ 0.99
HAPLN3Q96S86 AF201337.1-201ENST00000520239 748 ntBASIC21.25■□□□□ 0.99
HAPLN3Q96S86 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.25■□□□□ 0.99
HAPLN3Q96S86 AL121832.2-201ENST00000610979 668 ntBASIC21.25■□□□□ 0.99
HAPLN3Q96S86 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
HAPLN3Q96S86 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.25■□□□□ 0.99
HAPLN3Q96S86 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.25■□□□□ 0.99
HAPLN3Q96S86 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HAPLN3Q96S86 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
HAPLN3Q96S86 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
HAPLN3Q96S86 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.24■□□□□ 0.99
HAPLN3Q96S86 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HAPLN3Q96S86 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.24■□□□□ 0.99
HAPLN3Q96S86 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HAPLN3Q96S86 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.24■□□□□ 0.99
HAPLN3Q96S86 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.24■□□□□ 0.99
HAPLN3Q96S86 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.24■□□□□ 0.99
HAPLN3Q96S86 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
HAPLN3Q96S86 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.24■□□□□ 0.99
HAPLN3Q96S86 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.24■□□□□ 0.99
HAPLN3Q96S86 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HAPLN3Q96S86 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
HAPLN3Q96S86 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
HAPLN3Q96S86 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HAPLN3Q96S86 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.24■□□□□ 0.99
HAPLN3Q96S86 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
HAPLN3Q96S86 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HAPLN3Q96S86 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
HAPLN3Q96S86 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HAPLN3Q96S86 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.23■□□□□ 0.99
HAPLN3Q96S86 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HAPLN3Q96S86 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
HAPLN3Q96S86 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
HAPLN3Q96S86 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HAPLN3Q96S86 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
HAPLN3Q96S86 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HAPLN3Q96S86 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.23■□□□□ 0.99
HAPLN3Q96S86 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.23■□□□□ 0.99
HAPLN3Q96S86 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HAPLN3Q96S86 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.23■□□□□ 0.99
HAPLN3Q96S86 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HAPLN3Q96S86 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
HAPLN3Q96S86 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HAPLN3Q96S86 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HAPLN3Q96S86 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.23■□□□□ 0.99
HAPLN3Q96S86 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HAPLN3Q96S86 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
HAPLN3Q96S86 AC010980.2-201ENST00000587099 1412 ntBASIC21.22■□□□□ 0.99
HAPLN3Q96S86 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HAPLN3Q96S86 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.22■□□□□ 0.99
HAPLN3Q96S86 CYP21A1P-202ENST00000354927 1481 ntBASIC21.22■□□□□ 0.99
HAPLN3Q96S86 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HAPLN3Q96S86 MCRIP2P1-201ENST00000394346 511 ntBASIC21.22■□□□□ 0.99
HAPLN3Q96S86 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HAPLN3Q96S86 AC083906.2-201ENST00000511578 360 ntBASIC21.22■□□□□ 0.99
HAPLN3Q96S86 AC105036.2-201ENST00000569468 176 ntBASIC21.22■□□□□ 0.99
HAPLN3Q96S86 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.22■□□□□ 0.99
HAPLN3Q96S86 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
HAPLN3Q96S86 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HAPLN3Q96S86 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HAPLN3Q96S86 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HAPLN3Q96S86 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HAPLN3Q96S86 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.21■□□□□ 0.99
HAPLN3Q96S86 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HAPLN3Q96S86 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HAPLN3Q96S86 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HAPLN3Q96S86 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HAPLN3Q96S86 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HAPLN3Q96S86 AC093787.1-201ENST00000450396 207 ntBASIC21.21■□□□□ 0.99
HAPLN3Q96S86 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.21■□□□□ 0.99
HAPLN3Q96S86 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.21■□□□□ 0.99
HAPLN3Q96S86 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HAPLN3Q96S86 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
HAPLN3Q96S86 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HAPLN3Q96S86 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HAPLN3Q96S86 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
HAPLN3Q96S86 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HAPLN3Q96S86 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HAPLN3Q96S86 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.21■□□□□ 0.99
HAPLN3Q96S86 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HAPLN3Q96S86 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HAPLN3Q96S86 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
HAPLN3Q96S86 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HAPLN3Q96S86 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
HAPLN3Q96S86 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms