Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNAP47Q5SQN1 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNAP47Q5SQN1 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNAP47Q5SQN1 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNAP47Q5SQN1 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNAP47Q5SQN1 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.96■□□□□ 0.79
SNAP47Q5SQN1 POU5F1P3-201ENST00000428824 1078 ntBASIC19.96■□□□□ 0.79
SNAP47Q5SQN1 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.96■□□□□ 0.79
SNAP47Q5SQN1 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.96■□□□□ 0.79
SNAP47Q5SQN1 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
SNAP47Q5SQN1 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SNAP47Q5SQN1 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNAP47Q5SQN1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNAP47Q5SQN1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.96■□□□□ 0.79
SNAP47Q5SQN1 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNAP47Q5SQN1 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNAP47Q5SQN1 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNAP47Q5SQN1 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.95■□□□□ 0.78
SNAP47Q5SQN1 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNAP47Q5SQN1 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNAP47Q5SQN1 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNAP47Q5SQN1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.95■□□□□ 0.78
SNAP47Q5SQN1 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.95■□□□□ 0.78
SNAP47Q5SQN1 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.95■□□□□ 0.78
SNAP47Q5SQN1 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.95■□□□□ 0.78
SNAP47Q5SQN1 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.95■□□□□ 0.78
SNAP47Q5SQN1 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.95■□□□□ 0.78
SNAP47Q5SQN1 FAM21FP-204ENST00000608637 956 ntBASIC19.95■□□□□ 0.78
SNAP47Q5SQN1 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNAP47Q5SQN1 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNAP47Q5SQN1 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNAP47Q5SQN1 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNAP47Q5SQN1 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SNAP47Q5SQN1 KRT17P1-201ENST00000399211 1546 ntBASIC19.95■□□□□ 0.78
SNAP47Q5SQN1 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNAP47Q5SQN1 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNAP47Q5SQN1 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNAP47Q5SQN1 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNAP47Q5SQN1 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SNAP47Q5SQN1 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.95■□□□□ 0.78
SNAP47Q5SQN1 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.95■□□□□ 0.78
SNAP47Q5SQN1 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNAP47Q5SQN1 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SNAP47Q5SQN1 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SNAP47Q5SQN1 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SNAP47Q5SQN1 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.94■□□□□ 0.78
SNAP47Q5SQN1 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.94■□□□□ 0.78
SNAP47Q5SQN1 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNAP47Q5SQN1 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNAP47Q5SQN1 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNAP47Q5SQN1 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNAP47Q5SQN1 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
SNAP47Q5SQN1 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNAP47Q5SQN1 KRT18P29-201ENST00000397031 1267 ntBASIC19.94■□□□□ 0.78
SNAP47Q5SQN1 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.94■□□□□ 0.78
SNAP47Q5SQN1 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.94■□□□□ 0.78
SNAP47Q5SQN1 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNAP47Q5SQN1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNAP47Q5SQN1 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.93■□□□□ 0.78
SNAP47Q5SQN1 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNAP47Q5SQN1 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SNAP47Q5SQN1 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.93■□□□□ 0.78
SNAP47Q5SQN1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNAP47Q5SQN1 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SNAP47Q5SQN1 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
SNAP47Q5SQN1 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNAP47Q5SQN1 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNAP47Q5SQN1 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SNAP47Q5SQN1 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SNAP47Q5SQN1 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SNAP47Q5SQN1 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.93■□□□□ 0.78
SNAP47Q5SQN1 MYC-209ENST00000641252 345 ntBASIC19.93■□□□□ 0.78
SNAP47Q5SQN1 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNAP47Q5SQN1 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNAP47Q5SQN1 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNAP47Q5SQN1 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SNAP47Q5SQN1 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SNAP47Q5SQN1 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNAP47Q5SQN1 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNAP47Q5SQN1 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SNAP47Q5SQN1 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNAP47Q5SQN1 AL137060.1-201ENST00000618151 2648 ntBASIC19.92■□□□□ 0.78
SNAP47Q5SQN1 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNAP47Q5SQN1 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNAP47Q5SQN1 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SNAP47Q5SQN1 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.92■□□□□ 0.78
SNAP47Q5SQN1 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.92■□□□□ 0.78
SNAP47Q5SQN1 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.92■□□□□ 0.78
SNAP47Q5SQN1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.92■□□□□ 0.78
SNAP47Q5SQN1 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNAP47Q5SQN1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
SNAP47Q5SQN1 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNAP47Q5SQN1 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.92■□□□□ 0.78
SNAP47Q5SQN1 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SNAP47Q5SQN1 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
SNAP47Q5SQN1 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNAP47Q5SQN1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.92■□□□□ 0.78
SNAP47Q5SQN1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SNAP47Q5SQN1 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNAP47Q5SQN1 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms