Protein–RNA interactions for Protein: P34110

VPS35, Vacuolar protein sorting-associated protein 35, yeastyeast

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS35P34110 NDT80YHR124W 1884 nt3.97□□□□□ -1.77
VPS35P34110 YJR140W-AYJR140W-A 150 nt3.97□□□□□ -1.77
VPS35P34110 BIL1YOR304C-A 231 nt3.97□□□□□ -1.77
VPS35P34110 SNF12YNR023W 1701 nt3.97□□□□□ -1.77
VPS35P34110 FAS1YKL182W 6156 nt3.96□□□□□ -1.77
VPS35P34110 GPI13YLL031C 3054 nt3.96□□□□□ -1.77
VPS35P34110 CDC45YLR103C 1953 nt3.96□□□□□ -1.77
VPS35P34110 CWC22YGR278W 1734 nt3.96□□□□□ -1.78
VPS35P34110 YCG1YDR325W 3108 nt3.96□□□□□ -1.78
VPS35P34110 SPT16YGL207W 3108 nt3.96□□□□□ -1.78
VPS35P34110 YER188C-AYER188C-A 300 nt3.96□□□□□ -1.78
VPS35P34110 YFL032WYFL032W 321 nt3.96□□□□□ -1.78
VPS35P34110 RPL19BYBL027W 570 nt3.96□□□□□ -1.78
VPS35P34110 TIR2YOR010C 756 nt3.96□□□□□ -1.78
VPS35P34110 RPS23BYPR132W 438 nt3.96□□□□□ -1.78
VPS35P34110 STN1YDR082W 1485 nt3.96□□□□□ -1.78
VPS35P34110 VHR2YER064C 1518 nt3.95□□□□□ -1.78
VPS35P34110 YRM1YOR172W 2361 nt3.95□□□□□ -1.78
VPS35P34110 TMA19YKL056C 504 nt3.95□□□□□ -1.78
VPS35P34110 ISU1YPL135W 498 nt3.95□□□□□ -1.78
VPS35P34110 TRZ1YKR079C 2517 nt3.94□□□□□ -1.78
VPS35P34110 HOP2YGL033W 657 nt3.94□□□□□ -1.78
VPS35P34110 RFC3YNL290W 1023 nt3.94□□□□□ -1.78
VPS35P34110 YPL238CYPL238C 390 nt3.94□□□□□ -1.78
VPS35P34110 PHO81YGR233C 3537 nt3.94□□□□□ -1.78
VPS35P34110 SNX41YDR425W 1878 nt3.94□□□□□ -1.78
VPS35P34110 SEC15YGL233W 2733 nt3.93□□□□□ -1.78
VPS35P34110 SPT10YJL127C 1923 nt3.93□□□□□ -1.78
VPS35P34110 AAD16YFL057C 459 nt3.93□□□□□ -1.78
VPS35P34110 AIM32YML050W 936 nt3.93□□□□□ -1.78
VPS35P34110 PEX11YOL147C 711 nt3.93□□□□□ -1.78
VPS35P34110 YPR010C-AYPR010C-A 219 nt3.93□□□□□ -1.78
VPS35P34110 TRS120YDR407C 3870 nt3.92□□□□□ -1.78
VPS35P34110 NMA111YNL123W 2994 nt3.92□□□□□ -1.78
VPS35P34110 TSA2YDR453C 591 nt3.92□□□□□ -1.78
VPS35P34110 YEL057CYEL057C 702 nt3.92□□□□□ -1.78
VPS35P34110 YER107W-AYER107W-A 321 nt3.92□□□□□ -1.78
VPS35P34110 LSM8YJR022W 330 nt3.92□□□□□ -1.78
VPS35P34110 snR36snR36 182 nt3.92□□□□□ -1.78
VPS35P34110 BNI4YNL233W 2679 nt3.92□□□□□ -1.78
VPS35P34110 CHS3YBR023C 3498 nt3.91□□□□□ -1.78
VPS35P34110 CCT7YJL111W 1653 nt3.91□□□□□ -1.78
VPS35P34110 SLA1YBL007C 3735 nt3.91□□□□□ -1.78
VPS35P34110 DNM1YLL001W 2274 nt3.91□□□□□ -1.78
VPS35P34110 APE2YKL157W 2859 nt3.91□□□□□ -1.78
VPS35P34110 LSM1YJL124C 519 nt3.91□□□□□ -1.78
VPS35P34110 RPL39YJL189W 156 nt3.91□□□□□ -1.78
VPS35P34110 PRE8YML092C 753 nt3.91□□□□□ -1.78
VPS35P34110 NDD1YOR372C 1665 nt3.9□□□□□ -1.78
VPS35P34110 BAT1YHR208W 1182 nt3.9□□□□□ -1.79
VPS35P34110 MSL1YIR009W 336 nt3.9□□□□□ -1.79
VPS35P34110 YJL202CYJL202C 348 nt3.9□□□□□ -1.79
VPS35P34110 VBA4YDR119W 2307 nt3.9□□□□□ -1.79
VPS35P34110 STE5YDR103W 2754 nt3.9□□□□□ -1.79
VPS35P34110 BIT61YJL058C 1632 nt3.89□□□□□ -1.79
VPS35P34110 PWP2YCR057C 2772 nt3.89□□□□□ -1.79
VPS35P34110 PHM6YDR281C 315 nt3.89□□□□□ -1.79
VPS35P34110 PEX4YGR133W 552 nt3.89□□□□□ -1.79
VPS35P34110 URM1YIL008W 300 nt3.89□□□□□ -1.79
VPS35P34110 tW(UCA)QtW(UCA)Q 74 nt3.89□□□□□ -1.79
VPS35P34110 YMR290W-AYMR290W-A 348 nt3.89□□□□□ -1.79
VPS35P34110 RRN6YBL014C 2685 nt3.89□□□□□ -1.79
VPS35P34110 MNT3YIL014W 1893 nt3.88□□□□□ -1.79
VPS35P34110 JEN1YKL217W 1851 nt3.88□□□□□ -1.79
VPS35P34110 PRP22YER013W 3438 nt3.88□□□□□ -1.79
VPS35P34110 URA2YJL130C 6645 nt3.88□□□□□ -1.79
VPS35P34110 YHR063W-AYHR063W-A 336 nt3.88□□□□□ -1.79
VPS35P34110 AIM26YKL037W 357 nt3.88□□□□□ -1.79
VPS35P34110 YMR320WYMR320W 306 nt3.88□□□□□ -1.79
VPS35P34110 SSN8YNL025C 972 nt3.88□□□□□ -1.79
VPS35P34110 CHD1YER164W 4407 nt3.88□□□□□ -1.79
VPS35P34110 PDC2YDR081C 2778 nt3.87□□□□□ -1.79
VPS35P34110 ATG21YPL100W 1491 nt3.87□□□□□ -1.79
VPS35P34110 SSM4YIL030C 3960 nt3.87□□□□□ -1.79
VPS35P34110 SHE2YKL130C 741 nt3.87□□□□□ -1.79
VPS35P34110 EGD1YPL037C 474 nt3.87□□□□□ -1.79
VPS35P34110 YPR014CYPR014C 330 nt3.87□□□□□ -1.79
VPS35P34110 SNT1YCR033W 3681 nt3.86□□□□□ -1.79
VPS35P34110 RMT2YDR465C 1239 nt3.86□□□□□ -1.79
VPS35P34110 HPA3YEL066W 540 nt3.86□□□□□ -1.79
VPS35P34110 YGL074CYGL074C 327 nt3.86□□□□□ -1.79
VPS35P34110 tT(UGU)Q1tT(UGU)Q1 76 nt3.86□□□□□ -1.79
VPS35P34110 TIM8YJR135W-A 264 nt3.86□□□□□ -1.79
VPS35P34110 YBR137WYBR137W 540 nt3.86□□□□□ -1.79
VPS35P34110 REG1YDR028C 3045 nt3.86□□□□□ -1.79
VPS35P34110 OSH3YHR073W 2991 nt3.85□□□□□ -1.79
VPS35P34110 CAJ1YER048C 1176 nt3.85□□□□□ -1.79
VPS35P34110 snR191snR191 274 nt3.85□□□□□ -1.79
VPS35P34110 MDN1YLR106C 14733 nt3.85□□□□□ -1.79
VPS35P34110 SPT6YGR116W 4356 nt3.85□□□□□ -1.79
VPS35P34110 CDH1YGL003C 1701 nt3.84□□□□□ -1.79
VPS35P34110 TIM12YBR091C 330 nt3.84□□□□□ -1.79
VPS35P34110 RAD2YGR258C 3096 nt3.84□□□□□ -1.79
VPS35P34110 HEF3YNL014W 3135 nt3.84□□□□□ -1.8
VPS35P34110 TFB1YDR311W 1929 nt3.83□□□□□ -1.8
VPS35P34110 RSC1YGR056W 2787 nt3.83□□□□□ -1.8
VPS35P34110 MSH2YOL090W 2895 nt3.83□□□□□ -1.8
VPS35P34110 SEA4YBL104C 3117 nt3.83□□□□□ -1.8
VPS35P34110 HMF1YER057C 390 nt3.83□□□□□ -1.8
VPS35P34110 COX23YHR116W 456 nt3.83□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 38.3 ms