RNA–Protein interactions for RNA: YPL238C

YPL238C, Transcript of Dubious open reading frame, yeastyeast

Gene YPL238C, Length 390 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPL238CYPL238C MTC1P47018 478 aaKnown RBP9.76□□□□□ -0.85
YPL238CYPL238C DRS1P32892 752 aaKnown RBP9.4□□□□□ -0.9
YPL238CYPL238C FAP1P53971 965 aa8.65□□□□□ -1.02
YPL238CYPL238C DIP2Q12220 943 aaPredicted RBP8.15□□□□□ -1.1
YPL238CYPL238C PRI1P10363 409 aa8.1□□□□□ -1.11
YPL238CYPL238C ISW2Q08773 1120 aa8.1□□□□□ -1.11
YPL238CYPL238C PRY3P47033 881 aa8.08□□□□□ -1.12
YPL238CYPL238C AAD16Q02895 342 aa8.05□□□□□ -1.12
YPL238CYPL238C RPG1P38249 964 aaKnown RBP8□□□□□ -1.13
YPL238CYPL238C BFR2Q06631 534 aaKnown RBP7.93□□□□□ -1.14
YPL238CYPL238C AVT3P36062 692 aa7.84□□□□□ -1.15
YPL238CYPL238C RSE1Q04693 1361 aaKnown RBP7.82□□□□□ -1.16
YPL238CYPL238C TSR3Q12094 313 aaKnown RBP7.71□□□□□ -1.18
YPL238CYPL238C RPL17AP05740 184 aaKnown RBP7.56□□□□□ -1.2
YPL238CYPL238C RPL17BP46990 184 aaKnown RBP7.56□□□□□ -1.2
YPL238CYPL238C HAA1Q12753 694 aaKnown RBP7.56□□□□□ -1.2
YPL238CYPL238C REB1P21538 810 aa7.55□□□□□ -1.2
YPL238CYPL238C YCK3P39962 524 aa7.48□□□□□ -1.21
YPL238CYPL238C MRPL32P25348 183 aa7.44□□□□□ -1.22
YPL238CYPL238C SPT21P35209 758 aa7.14□□□□□ -1.27
YPL238CYPL238C TFA1P36100 482 aa7.07□□□□□ -1.28
YPL238CYPL238C YGL015CP33199 130 aa7.06□□□□□ -1.28
YPL238CYPL238C YKR023WP36119 530 aaKnown RBP7.05□□□□□ -1.28
YPL238CYPL238C CDC27P38042 758 aa7.03□□□□□ -1.28
YPL238CYPL238C RIM101P33400 625 aa6.98□□□□□ -1.29
YPL238CYPL238C HOP09932 586 aa6.97□□□□□ -1.29
YPL238CYPL238C DCD1P06773 312 aa6.92□□□□□ -1.3
YPL238CYPL238C TFC8Q12308 588 aa6.92□□□□□ -1.3
YPL238CYPL238C MAP2P38174 421 aaKnown RBP6.8□□□□□ -1.32
YPL238CYPL238C UBP10P53874 792 aaPredicted RBP6.8□□□□□ -1.32
YPL238CYPL238C YIL055CP40523 627 aaKnown RBP6.78□□□□□ -1.32
YPL238CYPL238C OXP1P28273 1286 aa6.76□□□□□ -1.33
YPL238CYPL238C PTP3P40048 928 aa6.74□□□□□ -1.33
YPL238CYPL238C SCY1P53009 804 aa6.74□□□□□ -1.33
YPL238CYPL238C BCH2P36122 765 aa6.72□□□□□ -1.33
YPL238CYPL238C YAH1Q12184 172 aaKnown RBP6.69□□□□□ -1.34
YPL238CYPL238C SLX5P32828 619 aaKnown RBP6.64□□□□□ -1.35
YPL238CYPL238C RSM7P47150 247 aa6.6□□□□□ -1.35
YPL238CYPL238C TIF4632P39936 914 aaKnown RBP6.59□□□□□ -1.35
YPL238CYPL238C EPS1P40557 701 aa6.57□□□□□ -1.36
YPL238CYPL238C BBC1P47068 1157 aa6.55□□□□□ -1.36
YPL238CYPL238C BDF1P35817 686 aa6.53□□□□□ -1.36
YPL238CYPL238C AI2P03876 854 aa6.52□□□□□ -1.37
YPL238CYPL238C SSP1P38871 571 aa6.51□□□□□ -1.37
YPL238CYPL238C TGL3P40308 642 aa6.51□□□□□ -1.37
YPL238CYPL238C YLR271WQ06152 274 aa6.5□□□□□ -1.37
YPL238CYPL238C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.48□□□□□ -1.37not detected
YPL238CYPL238C BUD31P25337 157 aaPredicted RBP6.35□□□□□ -1.39
YPL238CYPL238C PSD2P53037 1138 aaKnown RBP6.34□□□□□ -1.39
YPL238CYPL238C MGA2P40578 1113 aa6.32□□□□□ -1.4
YPL238CYPL238C MRM1P25270 412 aa6.31□□□□□ -1.4
YPL238CYPL238C UBP9P39967 754 aa6.3□□□□□ -1.4
YPL238CYPL238C CST9Q06032 482 aa6.29□□□□□ -1.4
YPL238CYPL238C YOR238WQ08634 303 aa6.29□□□□□ -1.4
YPL238CYPL238C YAP5P40574 245 aa6.27□□□□□ -1.41
YPL238CYPL238C NSR1P27476 414 aaKnown RBP RIP-Chip data6.21□□□□□ -1.42not detected
YPL238CYPL238C MST1P07236 462 aa6.2□□□□□ -1.42
YPL238CYPL238C RTG3P38165 486 aa6.2□□□□□ -1.42
YPL238CYPL238C PIB1Q06651 286 aa6.18□□□□□ -1.42
YPL238CYPL238C GTT3P39996 337 aa6.17□□□□□ -1.42
YPL238CYPL238C YBL029C-AQ3E756 94 aa6.14□□□□□ -1.43
YPL238CYPL238C YMR1P47147 688 aaKnown RBP RIP-Chip data6.13□□□□□ -1.43not detected
YPL238CYPL238C WSC3Q12215 556 aa6.13□□□□□ -1.43
YPL238CYPL238C VPS29P38759 282 aa6.12□□□□□ -1.43
YPL238CYPL238C DBP1P24784 617 aaKnown RBP6.11□□□□□ -1.43
YPL238CYPL238C SIS1P25294 352 aaKnown RBP6.11□□□□□ -1.43
YPL238CYPL238C RCR1P38212 213 aa6.1□□□□□ -1.43
YPL238CYPL238C YFR006WP43590 535 aa6.1□□□□□ -1.43
YPL238CYPL238C VNX1P42839 908 aa6.07□□□□□ -1.44
YPL238CYPL238C SPP1Q03012 353 aa6.06□□□□□ -1.44
YPL238CYPL238C STS1P38637 319 aa6.04□□□□□ -1.44
YPL238CYPL238C VMA1P17255 1071 aaKnown RBP5.99□□□□□ -1.45
YPL238CYPL238C TIF11P38912 153 aaKnown RBP5.99□□□□□ -1.45
YPL238CYPL238C SET4P42948 560 aa5.98□□□□□ -1.45
YPL238CYPL238C RAM2P29703 316 aa5.97□□□□□ -1.45
YPL238CYPL238C ULI1P43604 169 aa5.96□□□□□ -1.46
YPL238CYPL238C MIF2P35201 549 aa5.95□□□□□ -1.46
YPL238CYPL238C EAP1P36041 632 aaKnown RBP5.95□□□□□ -1.46
YPL238CYPL238C YOL036WQ08206 761 aa5.95□□□□□ -1.46
YPL238CYPL238C MSB4Q12317 492 aa5.95□□□□□ -1.46
YPL238CYPL238C MAK11P20484 414 aaKnown RBP5.94□□□□□ -1.46
YPL238CYPL238C SAM3Q08986 587 aa5.91□□□□□ -1.46
YPL238CYPL238C GYP5Q12344 894 aa5.91□□□□□ -1.46
YPL238CYPL238C LDB19Q12502 818 aa5.91□□□□□ -1.46
YPL238CYPL238C TRP5P00931 707 aaKnown RBP5.89□□□□□ -1.47
YPL238CYPL238C COQ8P27697 501 aa5.88□□□□□ -1.47
YPL238CYPL238C DCW1P36091 449 aa5.88□□□□□ -1.47
YPL238CYPL238C IOC2Q12072 812 aa5.88□□□□□ -1.47
YPL238CYPL238C YJL171CP46992 396 aa5.87□□□□□ -1.47
YPL238CYPL238C ABP1P15891 592 aaKnown RBP5.86□□□□□ -1.47
YPL238CYPL238C GRE2Q12068 342 aaKnown RBP5.86□□□□□ -1.47
YPL238CYPL238C HTA1P04911 132 aaKnown RBP5.85□□□□□ -1.47
YPL238CYPL238C HTA2P04912 132 aa5.85□□□□□ -1.47
YPL238CYPL238C ATH1P48016 1211 aa5.85□□□□□ -1.47
YPL238CYPL238C RTG1P32607 177 aa5.84□□□□□ -1.47
YPL238CYPL238C PTC3P34221 468 aaKnown RBP5.84□□□□□ -1.47
YPL238CYPL238C EDS1P38073 919 aa5.84□□□□□ -1.47
YPL238CYPL238C YNL035CP53962 389 aaKnown RBP5.82□□□□□ -1.48
YPL238CYPL238C NCR1Q12200 1170 aa5.82□□□□□ -1.48
YPL238CYPL238C AIR2Q12476 344 aaKnown RBP5.82□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms