RNA–Protein interactions for RNA: YDR081C

PDC2, Transcript of Transcription factor for thiamine-regulated genes, yeastyeast

Gene PDC2, Length 2,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDC2YDR081C MTC1P47018 478 aaKnown RBP8.12□□□□□ -1.11
PDC2YDR081C DRS1P32892 752 aaKnown RBP8.06□□□□□ -1.12
PDC2YDR081C FAP1P53971 965 aa7.32□□□□□ -1.24
PDC2YDR081C BFR2Q06631 534 aaKnown RBP7.01□□□□□ -1.29
PDC2YDR081C PRI1P10363 409 aa6.92□□□□□ -1.3
PDC2YDR081C PRY3P47033 881 aa6.91□□□□□ -1.3
PDC2YDR081C AAD16Q02895 342 aa6.83□□□□□ -1.32
PDC2YDR081C DIP2Q12220 943 aaPredicted RBP6.82□□□□□ -1.32
PDC2YDR081C AVT3P36062 692 aa6.81□□□□□ -1.32
PDC2YDR081C TFA1P36100 482 aa6.72□□□□□ -1.33
PDC2YDR081C YCK3P39962 524 aa6.7□□□□□ -1.34
PDC2YDR081C ISW2Q08773 1120 aa6.69□□□□□ -1.34
PDC2YDR081C RPG1P38249 964 aaKnown RBP6.67□□□□□ -1.34
PDC2YDR081C TSR3Q12094 313 aaKnown RBP6.5□□□□□ -1.37
PDC2YDR081C HAA1Q12753 694 aaKnown RBP6.47□□□□□ -1.37
PDC2YDR081C RSE1Q04693 1361 aaKnown RBP6.38□□□□□ -1.39
PDC2YDR081C MRPL32P25348 183 aa6.18□□□□□ -1.42
PDC2YDR081C RPL17AP05740 184 aaKnown RBP6.17□□□□□ -1.42
PDC2YDR081C RPL17BP46990 184 aaKnown RBP6.17□□□□□ -1.42
PDC2YDR081C REB1P21538 810 aa6.11□□□□□ -1.43
PDC2YDR081C SPT21P35209 758 aa5.99□□□□□ -1.45
PDC2YDR081C YGL015CP33199 130 aa5.98□□□□□ -1.45
PDC2YDR081C CDC27P38042 758 aa5.97□□□□□ -1.45
PDC2YDR081C YKR023WP36119 530 aaKnown RBP5.95□□□□□ -1.46
PDC2YDR081C RIM101P33400 625 aa5.91□□□□□ -1.46
PDC2YDR081C TFC8Q12308 588 aa5.8□□□□□ -1.48
PDC2YDR081C DCD1P06773 312 aa5.78□□□□□ -1.48
PDC2YDR081C HOP09932 586 aa5.78□□□□□ -1.48
PDC2YDR081C PTP3P40048 928 aa5.77□□□□□ -1.49
PDC2YDR081C MAP2P38174 421 aaKnown RBP5.76□□□□□ -1.49
PDC2YDR081C OXP1P28273 1286 aa5.76□□□□□ -1.49
PDC2YDR081C UBP10P53874 792 aaPredicted RBP5.75□□□□□ -1.49
PDC2YDR081C RQC2Q12532 1038 aaKnown RBP5.69□□□□□ -1.5
PDC2YDR081C SSP1P38871 571 aa5.67□□□□□ -1.5
PDC2YDR081C YAH1Q12184 172 aaKnown RBP5.64□□□□□ -1.51
PDC2YDR081C BCH2P36122 765 aa5.62□□□□□ -1.51
PDC2YDR081C YLR271WQ06152 274 aa5.61□□□□□ -1.51
PDC2YDR081C SCY1P53009 804 aa5.6□□□□□ -1.51
PDC2YDR081C DMA1P38823 416 aa5.59□□□□□ -1.52
PDC2YDR081C YIL055CP40523 627 aaKnown RBP5.58□□□□□ -1.52
PDC2YDR081C BUD31P25337 157 aaPredicted RBP5.56□□□□□ -1.52
PDC2YDR081C RSM7P47150 247 aa5.53□□□□□ -1.52
PDC2YDR081C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
PDC2YDR081C SLX5P32828 619 aaKnown RBP5.51□□□□□ -1.53
PDC2YDR081C TGL3P40308 642 aa5.5□□□□□ -1.53
PDC2YDR081C TIF4632P39936 914 aaKnown RBP5.46□□□□□ -1.53
PDC2YDR081C MGA2P40578 1113 aa5.46□□□□□ -1.54
PDC2YDR081C CST9Q06032 482 aa5.45□□□□□ -1.54
PDC2YDR081C BDF1P35817 686 aa5.44□□□□□ -1.54
PDC2YDR081C PSD2P53037 1138 aaKnown RBP5.44□□□□□ -1.54
PDC2YDR081C AI2P03876 854 aa5.44□□□□□ -1.54
PDC2YDR081C EPS1P40557 701 aa5.43□□□□□ -1.54
PDC2YDR081C BBC1P47068 1157 aa5.34□□□□□ -1.55
PDC2YDR081C MST1P07236 462 aa5.33□□□□□ -1.56
PDC2YDR081C MRM1P25270 412 aa5.28□□□□□ -1.56
PDC2YDR081C RCR1P38212 213 aa5.27□□□□□ -1.57
PDC2YDR081C UBP9P39967 754 aa5.27□□□□□ -1.57
PDC2YDR081C RAM2P29703 316 aa5.27□□□□□ -1.57
PDC2YDR081C SAS10Q12136 610 aaPredicted RBP5.27□□□□□ -1.57
PDC2YDR081C TAF7Q05021 590 aa5.26□□□□□ -1.57
PDC2YDR081C NSR1P27476 414 aaKnown RBP RIP-Chip data5.26□□□□□ -1.57not detected
PDC2YDR081C YOR238WQ08634 303 aa5.21□□□□□ -1.58
PDC2YDR081C SIS1P25294 352 aaKnown RBP5.2□□□□□ -1.58
PDC2YDR081C YBL029C-AQ3E756 94 aa5.2□□□□□ -1.58
PDC2YDR081C RTG3P38165 486 aa5.19□□□□□ -1.58
PDC2YDR081C VPS29P38759 282 aa5.17□□□□□ -1.58
PDC2YDR081C YAP5P40574 245 aa5.16□□□□□ -1.58
PDC2YDR081C VNX1P42839 908 aa5.15□□□□□ -1.58
PDC2YDR081C SET1P38827 1080 aaKnown RBP5.15□□□□□ -1.59
PDC2YDR081C MAK11P20484 414 aaKnown RBP5.14□□□□□ -1.59
PDC2YDR081C YPR148CQ06523 435 aa5.11□□□□□ -1.59
PDC2YDR081C STS1P38637 319 aa5.1□□□□□ -1.59
PDC2YDR081C LEU3P08638 886 aa5.1□□□□□ -1.59
PDC2YDR081C LEO1P38439 464 aa5.09□□□□□ -1.59
PDC2YDR081C YMR1P47147 688 aaKnown RBP RIP-Chip data5.08□□□□□ -1.6not detected
PDC2YDR081C COQ8P27697 501 aa5.07□□□□□ -1.6
PDC2YDR081C YFR006WP43590 535 aa5.06□□□□□ -1.6
PDC2YDR081C VPS70P47161 811 aa5.06□□□□□ -1.6
PDC2YDR081C DBP1P24784 617 aaKnown RBP5.05□□□□□ -1.6
PDC2YDR081C EDS1P38073 919 aa5.05□□□□□ -1.6
PDC2YDR081C PIB1Q06651 286 aa5.05□□□□□ -1.6
PDC2YDR081C WSC3Q12215 556 aa5.05□□□□□ -1.6
PDC2YDR081C SPP1Q03012 353 aa5.04□□□□□ -1.6
PDC2YDR081C IFH1P39520 1085 aa5.02□□□□□ -1.61
PDC2YDR081C TIF11P38912 153 aaKnown RBP5.01□□□□□ -1.61
PDC2YDR081C MIF2P35201 549 aa5.01□□□□□ -1.61
PDC2YDR081C CKB1P43639 278 aa5□□□□□ -1.61
PDC2YDR081C IOC2Q12072 812 aa5□□□□□ -1.61
PDC2YDR081C AIR2Q12476 344 aaKnown RBP5□□□□□ -1.61
PDC2YDR081C NOP53Q12080 455 aaKnown RBP4.99□□□□□ -1.61
PDC2YDR081C GTT3P39996 337 aa4.98□□□□□ -1.61
PDC2YDR081C FKH1P40466 484 aa4.98□□□□□ -1.61
PDC2YDR081C PTC3P34221 468 aaKnown RBP4.97□□□□□ -1.61
PDC2YDR081C SPB4P25808 606 aaPredicted RBP4.97□□□□□ -1.61
PDC2YDR081C VMA1P17255 1071 aaKnown RBP4.96□□□□□ -1.62
PDC2YDR081C LDB19Q12502 818 aa4.96□□□□□ -1.62
PDC2YDR081C DSF2P38213 736 aa4.95□□□□□ -1.62
PDC2YDR081C PBS2P08018 668 aa4.94□□□□□ -1.62
PDC2YDR081C ULI1P43604 169 aa4.94□□□□□ -1.62
PDC2YDR081C MSB4Q12317 492 aa4.93□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms