Protein–RNA interactions for Protein: P0CX71

TY1A-ER1, Transposon Ty1-ER1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-ER1P0CX71 ELM1YKL048C 1923 nt3.82□□□□□ -1.8
TY1A-ER1P0CX71 KGD1YIL125W 3045 nt3.81□□□□□ -1.8
TY1A-ER1P0CX71 YER023C-AYER023C-A 213 nt3.81□□□□□ -1.8
TY1A-ER1P0CX71 ATG33YLR356W 594 nt3.81□□□□□ -1.8
TY1A-ER1P0CX71 MUS81YDR386W 1899 nt3.81□□□□□ -1.8
TY1A-ER1P0CX71 NUP133YKR082W 3474 nt3.8□□□□□ -1.8
TY1A-ER1P0CX71 ULS1YOR191W 4860 nt3.8□□□□□ -1.8
TY1A-ER1P0CX71 CDC36YDL165W 576 nt3.8□□□□□ -1.8
TY1A-ER1P0CX71 SMA2YML066C 1110 nt3.8□□□□□ -1.8
TY1A-ER1P0CX71 HEM4YOR278W 828 nt3.8□□□□□ -1.8
TY1A-ER1P0CX71 YBR085C-AYBR085C-A 258 nt3.8□□□□□ -1.8
TY1A-ER1P0CX71 GRS2YPR081C 1857 nt3.79□□□□□ -1.8
TY1A-ER1P0CX71 FAA2YER015W 2235 nt3.79□□□□□ -1.8
TY1A-ER1P0CX71 KHA1YJL094C 2622 nt3.79□□□□□ -1.8
TY1A-ER1P0CX71 YDL176WYDL176W 2127 nt3.79□□□□□ -1.8
TY1A-ER1P0CX71 ATG2YNL242W 4779 nt3.79□□□□□ -1.8
TY1A-ER1P0CX71 HOS3YPL116W 2094 nt3.79□□□□□ -1.8
TY1A-ER1P0CX71 URB2YJR041C 3525 nt3.79□□□□□ -1.8
TY1A-ER1P0CX71 STE14YDR410C 720 nt3.79□□□□□ -1.8
TY1A-ER1P0CX71 AIM26YKL037W 357 nt3.79□□□□□ -1.8
TY1A-ER1P0CX71 PAU23YLR037C 375 nt3.79□□□□□ -1.8
TY1A-ER1P0CX71 YPL025CYPL025C 558 nt3.79□□□□□ -1.8
TY1A-ER1P0CX71 NUP60YAR002W 1620 nt3.79□□□□□ -1.8
TY1A-ER1P0CX71 VHR2YER064C 1518 nt3.79□□□□□ -1.8
TY1A-ER1P0CX71 AIP1YMR092C 1848 nt3.79□□□□□ -1.8
TY1A-ER1P0CX71 ROD1YOR018W 2514 nt3.78□□□□□ -1.8
TY1A-ER1P0CX71 PCF11YDR228C 1881 nt3.78□□□□□ -1.8
TY1A-ER1P0CX71 SRL3YKR091W 741 nt3.78□□□□□ -1.8
TY1A-ER1P0CX71 YLR416CYLR416C 399 nt3.78□□□□□ -1.8
TY1A-ER1P0CX71 DAL82YNL314W 768 nt3.78□□□□□ -1.8
TY1A-ER1P0CX71 ISU1YPL135W 498 nt3.78□□□□□ -1.8
TY1A-ER1P0CX71 TRK1YJL129C 3708 nt3.78□□□□□ -1.8
TY1A-ER1P0CX71 21S_rRNA21S_rRNA 3296 nt3.77□□□□□ -1.81
TY1A-ER1P0CX71 snR7-SsnR7-S 179 nt3.77□□□□□ -1.81
TY1A-ER1P0CX71 TSA2YDR453C 591 nt3.77□□□□□ -1.81
TY1A-ER1P0CX71 AST2YER101C 1293 nt3.77□□□□□ -1.81
TY1A-ER1P0CX71 YMR307C-AYMR307C-A 195 nt3.77□□□□□ -1.81
TY1A-ER1P0CX71 RPL23AYBL087C 414 nt3.77□□□□□ -1.81
TY1A-ER1P0CX71 EGD1YPL037C 474 nt3.77□□□□□ -1.81
TY1A-ER1P0CX71 ARK1YNL020C 1917 nt3.77□□□□□ -1.81
TY1A-ER1P0CX71 CPA2YJR109C 3357 nt3.77□□□□□ -1.81
TY1A-ER1P0CX71 BYE1YKL005C 1785 nt3.76□□□□□ -1.81
TY1A-ER1P0CX71 RPB9YGL070C 369 nt3.76□□□□□ -1.81
TY1A-ER1P0CX71 ADK1YDR226W 669 nt3.75□□□□□ -1.81
TY1A-ER1P0CX71 YDR344CYDR344C 444 nt3.75□□□□□ -1.81
TY1A-ER1P0CX71 PSY1YKL076C 384 nt3.75□□□□□ -1.81
TY1A-ER1P0CX71 SPP382YLR424W 2127 nt3.75□□□□□ -1.81
TY1A-ER1P0CX71 YOL160WYOL160W 342 nt3.75□□□□□ -1.81
TY1A-ER1P0CX71 YPR059CYPR059C 387 nt3.75□□□□□ -1.81
TY1A-ER1P0CX71 YGR237CYGR237C 2358 nt3.75□□□□□ -1.81
TY1A-ER1P0CX71 NMA111YNL123W 2994 nt3.75□□□□□ -1.81
TY1A-ER1P0CX71 RKM1YPL208W 1752 nt3.74□□□□□ -1.81
TY1A-ER1P0CX71 MRP8YKL142W 660 nt3.74□□□□□ -1.81
TY1A-ER1P0CX71 YAL056C-AYAL056C-A 351 nt3.74□□□□□ -1.81
TY1A-ER1P0CX71 RPL8BYLL045C 771 nt3.74□□□□□ -1.81
TY1A-ER1P0CX71 YAR019W-AYAR019W-A 333 nt3.74□□□□□ -1.81
TY1A-ER1P0CX71 YAR070CYAR070C 300 nt3.74□□□□□ -1.81
TY1A-ER1P0CX71 MIS1YBR084W 2928 nt3.74□□□□□ -1.81
TY1A-ER1P0CX71 HFM1YGL251C 3564 nt3.73□□□□□ -1.81
TY1A-ER1P0CX71 SNF12YNR023W 1701 nt3.73□□□□□ -1.81
TY1A-ER1P0CX71 YCK3YER123W 1575 nt3.73□□□□□ -1.81
TY1A-ER1P0CX71 PDC2YDR081C 2778 nt3.73□□□□□ -1.81
TY1A-ER1P0CX71 YDL211CYDL211C 1119 nt3.73□□□□□ -1.81
TY1A-ER1P0CX71 FRQ1YDR373W 573 nt3.73□□□□□ -1.81
TY1A-ER1P0CX71 ISD11YER048W-A 285 nt3.73□□□□□ -1.81
TY1A-ER1P0CX71 YGR069WYGR069W 336 nt3.73□□□□□ -1.81
TY1A-ER1P0CX71 tT(UGU)Q1tT(UGU)Q1 76 nt3.73□□□□□ -1.81
TY1A-ER1P0CX71 TMA10YLR327C 261 nt3.73□□□□□ -1.81
TY1A-ER1P0CX71 FSH3YOR280C 801 nt3.73□□□□□ -1.81
TY1A-ER1P0CX71 SSY1YDR160W 2559 nt3.73□□□□□ -1.81
TY1A-ER1P0CX71 TAF7YMR227C 1773 nt3.73□□□□□ -1.81
TY1A-ER1P0CX71 VPS41YDR080W 2979 nt3.72□□□□□ -1.81
TY1A-ER1P0CX71 TLC1TLC1 1301 nt3.72□□□□□ -1.81
TY1A-ER1P0CX71 LCB5YLR260W 2064 nt3.72□□□□□ -1.81
TY1A-ER1P0CX71 SPT23YKL020C 3249 nt3.72□□□□□ -1.81
TY1A-ER1P0CX71 ARO2YGL148W 1131 nt3.72□□□□□ -1.81
TY1A-ER1P0CX71 POG1YIL122W 1056 nt3.72□□□□□ -1.81
TY1A-ER1P0CX71 RPS22BYLR367W 393 nt3.72□□□□□ -1.81
TY1A-ER1P0CX71 YLR458WYLR458W 381 nt3.72□□□□□ -1.81
TY1A-ER1P0CX71 YNR075C-AYNR075C-A 93 nt3.72□□□□□ -1.81
TY1A-ER1P0CX71 YPR053CYPR053C 456 nt3.72□□□□□ -1.81
TY1A-ER1P0CX71 COX1Q0045 1605 nt3.72□□□□□ -1.81
TY1A-ER1P0CX71 MSD1YPL104W 1977 nt3.71□□□□□ -1.82
TY1A-ER1P0CX71 KIP3YGL216W 2418 nt3.71□□□□□ -1.82
TY1A-ER1P0CX71 MNN4YKL201C 3537 nt3.71□□□□□ -1.82
TY1A-ER1P0CX71 SNA2YDR525W-A 240 nt3.71□□□□□ -1.82
TY1A-ER1P0CX71 YGR022CYGR022C 330 nt3.71□□□□□ -1.82
TY1A-ER1P0CX71 TAR1YLR154W-C 375 nt3.71□□□□□ -1.82
TY1A-ER1P0CX71 YBL008W-AYBL008W-A 240 nt3.71□□□□□ -1.82
TY1A-ER1P0CX71 RFC3YNL290W 1023 nt3.71□□□□□ -1.82
TY1A-ER1P0CX71 PTA1YAL043C 2358 nt3.71□□□□□ -1.82
TY1A-ER1P0CX71 TCO89YPL180W 2400 nt3.71□□□□□ -1.82
TY1A-ER1P0CX71 HMG1YML075C 3165 nt3.71□□□□□ -1.82
TY1A-ER1P0CX71 APL4YPR029C 2499 nt3.7□□□□□ -1.82
TY1A-ER1P0CX71 NAN1YPL126W 2691 nt3.7□□□□□ -1.82
TY1A-ER1P0CX71 REV1YOR346W 2958 nt3.7□□□□□ -1.82
TY1A-ER1P0CX71 PRK1YIL095W 2433 nt3.7□□□□□ -1.82
TY1A-ER1P0CX71 TRZ1YKR079C 2517 nt3.7□□□□□ -1.82
TY1A-ER1P0CX71 RPS13YDR064W 456 nt3.7□□□□□ -1.82
TY1A-ER1P0CX71 YJL182CYJL182C 318 nt3.7□□□□□ -1.82
Retrieved 100 of 7,029 protein–RNA pairs in 78.6 ms