RNA–Protein interactions for RNA: YPL208W

RKM1, Transcript of SET-domain lysine-N-methyltransferase, yeastyeast

Gene RKM1, Length 1,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKM1YPL208W MTC1P47018 478 aaKnown RBP9.86□□□□□ -0.83
RKM1YPL208W DRS1P32892 752 aaKnown RBP9.24□□□□□ -0.93
RKM1YPL208W FAP1P53971 965 aa8.93□□□□□ -0.98
RKM1YPL208W PRY3P47033 881 aa8.37□□□□□ -1.07
RKM1YPL208W PRI1P10363 409 aa8.3□□□□□ -1.08
RKM1YPL208W AAD16Q02895 342 aa8.27□□□□□ -1.09
RKM1YPL208W ISW2Q08773 1120 aa8.19□□□□□ -1.1
RKM1YPL208W RPG1P38249 964 aaKnown RBP8.11□□□□□ -1.11
RKM1YPL208W DIP2Q12220 943 aaPredicted RBP8.1□□□□□ -1.11
RKM1YPL208W TSR3Q12094 313 aaKnown RBP7.88□□□□□ -1.15
RKM1YPL208W YCK3P39962 524 aa7.84□□□□□ -1.15
RKM1YPL208W HAA1Q12753 694 aaKnown RBP7.82□□□□□ -1.16
RKM1YPL208W RSE1Q04693 1361 aaKnown RBP7.82□□□□□ -1.16
RKM1YPL208W AVT3P36062 692 aa7.77□□□□□ -1.17
RKM1YPL208W BFR2Q06631 534 aaKnown RBP7.69□□□□□ -1.18
RKM1YPL208W RPL17AP05740 184 aaKnown RBP7.59□□□□□ -1.2
RKM1YPL208W RPL17BP46990 184 aaKnown RBP7.59□□□□□ -1.2
RKM1YPL208W MRPL32P25348 183 aa7.58□□□□□ -1.2
RKM1YPL208W REB1P21538 810 aa7.56□□□□□ -1.2
RKM1YPL208W YGL015CP33199 130 aa7.25□□□□□ -1.25
RKM1YPL208W SPT21P35209 758 aa7.2□□□□□ -1.26
RKM1YPL208W CDC27P38042 758 aa7.17□□□□□ -1.26
RKM1YPL208W YKR023WP36119 530 aaKnown RBP7.15□□□□□ -1.27
RKM1YPL208W HOP09932 586 aa7.03□□□□□ -1.28
RKM1YPL208W DCD1P06773 312 aa7□□□□□ -1.29
RKM1YPL208W TFC8Q12308 588 aa7□□□□□ -1.29
RKM1YPL208W RIM101P33400 625 aa6.97□□□□□ -1.29
RKM1YPL208W MAP2P38174 421 aaKnown RBP6.95□□□□□ -1.3
RKM1YPL208W UBP10P53874 792 aaPredicted RBP6.95□□□□□ -1.3
RKM1YPL208W SCY1P53009 804 aa6.82□□□□□ -1.32
RKM1YPL208W BCH2P36122 765 aa6.78□□□□□ -1.32
RKM1YPL208W OXP1P28273 1286 aa6.74□□□□□ -1.33
RKM1YPL208W SLX5P32828 619 aaKnown RBP6.73□□□□□ -1.33
RKM1YPL208W TFA1P36100 482 aa6.72□□□□□ -1.33
RKM1YPL208W TIF4632P39936 914 aaKnown RBP6.69□□□□□ -1.34
RKM1YPL208W YIL055CP40523 627 aaKnown RBP6.69□□□□□ -1.34
RKM1YPL208W PTP3P40048 928 aa6.68□□□□□ -1.34
RKM1YPL208W TGL3P40308 642 aa6.64□□□□□ -1.35
RKM1YPL208W BUD31P25337 157 aaPredicted RBP6.62□□□□□ -1.35
RKM1YPL208W EPS1P40557 701 aa6.62□□□□□ -1.35
RKM1YPL208W YAH1Q12184 172 aaKnown RBP6.59□□□□□ -1.35
RKM1YPL208W BDF1P35817 686 aa6.59□□□□□ -1.35
RKM1YPL208W RSM7P47150 247 aa6.57□□□□□ -1.36
RKM1YPL208W BBC1P47068 1157 aa6.52□□□□□ -1.37
RKM1YPL208W AI2P03876 854 aa6.51□□□□□ -1.37
RKM1YPL208W UBP9P39967 754 aa6.46□□□□□ -1.37
RKM1YPL208W YLR271WQ06152 274 aa6.44□□□□□ -1.38
RKM1YPL208W SSP1P38871 571 aa6.37□□□□□ -1.39
RKM1YPL208W YOR238WQ08634 303 aa6.37□□□□□ -1.39
RKM1YPL208W MST1P07236 462 aa6.34□□□□□ -1.39
RKM1YPL208W SIS1P25294 352 aaKnown RBP6.34□□□□□ -1.39
RKM1YPL208W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.34□□□□□ -1.39not detected
RKM1YPL208W PSD2P53037 1138 aaKnown RBP6.33□□□□□ -1.4
RKM1YPL208W NSR1P27476 414 aaKnown RBP RIP-Chip data6.32□□□□□ -1.4not detected
RKM1YPL208W YAP5P40574 245 aa6.32□□□□□ -1.4
RKM1YPL208W YBL029C-AQ3E756 94 aa6.29□□□□□ -1.4
RKM1YPL208W MRM1P25270 412 aa6.28□□□□□ -1.4
RKM1YPL208W CST9Q06032 482 aa6.22□□□□□ -1.41
RKM1YPL208W MGA2P40578 1113 aa6.21□□□□□ -1.41
RKM1YPL208W WSC3Q12215 556 aa6.21□□□□□ -1.41
RKM1YPL208W GTT3P39996 337 aa6.21□□□□□ -1.42
RKM1YPL208W VNX1P42839 908 aa6.21□□□□□ -1.42
RKM1YPL208W PIB1Q06651 286 aa6.2□□□□□ -1.42
RKM1YPL208W SPP1Q03012 353 aa6.17□□□□□ -1.42
RKM1YPL208W RTG3P38165 486 aa6.14□□□□□ -1.43
RKM1YPL208W YMR1P47147 688 aaKnown RBP RIP-Chip data6.11□□□□□ -1.43not detected
RKM1YPL208W VPS29P38759 282 aa6.11□□□□□ -1.43
RKM1YPL208W DBP1P24784 617 aaKnown RBP6.1□□□□□ -1.43
RKM1YPL208W TIF11P38912 153 aaKnown RBP6.1□□□□□ -1.43
RKM1YPL208W YFR006WP43590 535 aa6.08□□□□□ -1.44
RKM1YPL208W RCR1P38212 213 aa6.07□□□□□ -1.44
RKM1YPL208W STS1P38637 319 aa6.05□□□□□ -1.44
RKM1YPL208W ULI1P43604 169 aa6.05□□□□□ -1.44
RKM1YPL208W SET4P42948 560 aa6.02□□□□□ -1.45
RKM1YPL208W MSB4Q12317 492 aa6.02□□□□□ -1.45
RKM1YPL208W VMA1P17255 1071 aaKnown RBP6.01□□□□□ -1.45
RKM1YPL208W YOL036WQ08206 761 aa6.01□□□□□ -1.45
RKM1YPL208W LDB19Q12502 818 aa6.01□□□□□ -1.45
RKM1YPL208W IOC2Q12072 812 aa6□□□□□ -1.45
RKM1YPL208W EAP1P36041 632 aaKnown RBP5.99□□□□□ -1.45
RKM1YPL208W AIR2Q12476 344 aaKnown RBP5.99□□□□□ -1.45
RKM1YPL208W FKH1P40466 484 aa5.98□□□□□ -1.45
RKM1YPL208W YJL171CP46992 396 aa5.98□□□□□ -1.45
RKM1YPL208W TRP5P00931 707 aaKnown RBP5.95□□□□□ -1.46
RKM1YPL208W SAM3Q08986 587 aa5.95□□□□□ -1.46
RKM1YPL208W RTG1P32607 177 aa5.92□□□□□ -1.46
RKM1YPL208W GYP5Q12344 894 aa5.9□□□□□ -1.46
RKM1YPL208W BMT6Q12291 365 aa5.89□□□□□ -1.47
RKM1YPL208W RAM2P29703 316 aa5.88□□□□□ -1.47
RKM1YPL208W YNL035CP53962 389 aaKnown RBP5.88□□□□□ -1.47
RKM1YPL208W NCR1Q12200 1170 aa5.88□□□□□ -1.47
RKM1YPL208W MIF2P35201 549 aa5.87□□□□□ -1.47
RKM1YPL208W DCW1P36091 449 aa5.87□□□□□ -1.47
RKM1YPL208W ABP1P15891 592 aaKnown RBP5.86□□□□□ -1.47
RKM1YPL208W MAK11P20484 414 aaKnown RBP5.86□□□□□ -1.47
RKM1YPL208W HTA1P04911 132 aaKnown RBP5.85□□□□□ -1.47
RKM1YPL208W HTA2P04912 132 aa5.85□□□□□ -1.47
RKM1YPL208W SEC61P32915 480 aa5.85□□□□□ -1.47
RKM1YPL208W TFG1P41895 735 aaPredicted RBP5.83□□□□□ -1.48
RKM1YPL208W JIP4Q03361 876 aa5.83□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms