RNA–Protein interactions for RNA: YJL129C

TRK1, Transcript of Component of the Trk1p-Trk2p potassium transport system, yeast

Gene TRK1, Length 3,708 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRK1	YJL129C	RQC2	Q12532	1038 aa	Known RBP	6.34	□□□□□ -1.39
TRK1	YJL129C	BFR2	Q06631	534 aa	Known RBP	6.19	□□□□□ -1.42
TRK1	YJL129C	NOP2	P40991	618 aa	Known RBP	5.66	□□□□□ -1.5
TRK1	YJL129C	CAB3	P36076	571 aa		5.59	□□□□□ -1.51
TRK1	YJL129C	EBP2	P36049	427 aa	Known RBP	5.57	□□□□□ -1.52
TRK1	YJL129C	URN1	Q06525	465 aa	Known RBP	5.57	□□□□□ -1.52
TRK1	YJL129C	SIS2	P36024	562 aa		5.48	□□□□□ -1.53
TRK1	YJL129C	AVT3	P36062	692 aa		5.45	□□□□□ -1.54
TRK1	YJL129C	TAF7	Q05021	590 aa		5.45	□□□□□ -1.54
TRK1	YJL129C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	5.4	□□□□□ -1.54	not detected
TRK1	YJL129C	YFR016C	P43597	1233 aa	Known RBP	5.35	□□□□□ -1.55
TRK1	YJL129C	YPR148C	Q06523	435 aa		5.35	□□□□□ -1.55
TRK1	YJL129C	DRS1	P32892	752 aa	Known RBP	5.33	□□□□□ -1.56
TRK1	YJL129C	CWC22	P53333	577 aa	Known RBP	5.21	□□□□□ -1.57
TRK1	YJL129C	RPS0B	P46654	252 aa	Known RBP	5.2	□□□□□ -1.58
TRK1	YJL129C	KRI1	P42846	591 aa	Known RBP	5.17	□□□□□ -1.58
TRK1	YJL129C	DIP2	Q12220	943 aa	Predicted RBP	5.16	□□□□□ -1.58
TRK1	YJL129C	AIM44	Q99299	758 aa		5.15	□□□□□ -1.58
TRK1	YJL129C	LEO1	P38439	464 aa		5.13	□□□□□ -1.59
TRK1	YJL129C	MNN4	P36044	1178 aa		5.09	□□□□□ -1.59
TRK1	YJL129C	YRB30	P53107	440 aa	Predicted RBP	5.06	□□□□□ -1.6
TRK1	YJL129C	PSH1	Q12161	406 aa		5.06	□□□□□ -1.6
TRK1	YJL129C	RSE1	Q04693	1361 aa	Known RBP	5.05	□□□□□ -1.6
TRK1	YJL129C	ENV11	P53246	860 aa		5.05	□□□□□ -1.6
TRK1	YJL129C	TFA1	P36100	482 aa		5.04	□□□□□ -1.6
TRK1	YJL129C	DEF1	P35732	738 aa	Known RBP	5.04	□□□□□ -1.6
TRK1	YJL129C	TCB2	P48231	1178 aa		5.03	□□□□□ -1.6
TRK1	YJL129C	MTC1	P47018	478 aa	Known RBP	4.98	□□□□□ -1.61
TRK1	YJL129C	RNA1	P11745	407 aa	Known RBP	4.98	□□□□□ -1.61
TRK1	YJL129C	SPT21	P35209	758 aa		4.98	□□□□□ -1.61
TRK1	YJL129C	NAP1	P25293	417 aa	Known RBP	4.97	□□□□□ -1.61
TRK1	YJL129C	FPR3	P38911	411 aa	Known RBP	4.96	□□□□□ -1.61
TRK1	YJL129C	IOC4	Q04213	475 aa		4.96	□□□□□ -1.61
TRK1	YJL129C	RLP24	Q07915	199 aa	Known RBP	4.96	□□□□□ -1.62
TRK1	YJL129C	ENP1	P38333	483 aa	Known RBP	4.95	□□□□□ -1.62
TRK1	YJL129C	CLC1	P17891	233 aa		4.95	□□□□□ -1.62
TRK1	YJL129C	NUG1	P40010	520 aa	Known RBP	4.94	□□□□□ -1.62
TRK1	YJL129C	SEC3	P33332	1336 aa	Known RBP	4.94	□□□□□ -1.62
TRK1	YJL129C	FPR4	Q06205	392 aa	Predicted RBP	4.94	□□□□□ -1.62
TRK1	YJL129C	SPT7	P35177	1332 aa		4.93	□□□□□ -1.62
TRK1	YJL129C	SPT2	P06843	333 aa	Predicted RBP	4.93	□□□□□ -1.62
TRK1	YJL129C	SAS10	Q12136	610 aa	Predicted RBP	4.92	□□□□□ -1.62
TRK1	YJL129C	YGR130C	P53278	816 aa		4.92	□□□□□ -1.62
TRK1	YJL129C	QCR6	P00127	147 aa		4.9	□□□□□ -1.62
TRK1	YJL129C	FUN12	P39730	1002 aa	Known RBP	4.9	□□□□□ -1.62
TRK1	YJL129C	IFH1	P39520	1085 aa		4.88	□□□□□ -1.63
TRK1	YJL129C	SKI3	P17883	1432 aa	Known RBP	4.88	□□□□□ -1.63
TRK1	YJL129C	NOP53	Q12080	455 aa	Known RBP	4.88	□□□□□ -1.63
TRK1	YJL129C	IME2	P32581	645 aa		4.86	□□□□□ -1.63
TRK1	YJL129C	SWE1	P32944	819 aa		4.86	□□□□□ -1.63
TRK1	YJL129C	GRX3	Q03835	250 aa		4.84	□□□□□ -1.63
TRK1	YJL129C	EAF7	P53911	425 aa	Known RBP	4.84	□□□□□ -1.63
TRK1	YJL129C	DOS2	P54858	310 aa		4.84	□□□□□ -1.63
TRK1	YJL129C	RLF2	Q12495	606 aa		4.84	□□□□□ -1.64
TRK1	YJL129C	LEU3	P08638	886 aa		4.81	□□□□□ -1.64
TRK1	YJL129C	SPC110	P32380	944 aa		4.79	□□□□□ -1.64
TRK1	YJL129C	RPN1	P38764	993 aa	Known RBP	4.79	□□□□□ -1.64
TRK1	YJL129C	NMD2	P38798	1089 aa	Known RBP	4.79	□□□□□ -1.64
TRK1	YJL129C	RAD26	P40352	1085 aa		4.79	□□□□□ -1.64
TRK1	YJL129C	HSP82	P02829	709 aa	Known RBP	4.79	□□□□□ -1.64
TRK1	YJL129C	YNL011C	P53980	444 aa		4.78	□□□□□ -1.64
TRK1	YJL129C	PRS1	P32895	427 aa	Known RBP	4.77	□□□□□ -1.65
TRK1	YJL129C	RIX1	P38883	763 aa	Predicted RBP	4.77	□□□□□ -1.65
TRK1	YJL129C	POL5	P39985	1022 aa	Known RBP	4.77	□□□□□ -1.65
TRK1	YJL129C	SNU71	P53207	620 aa	Known RBP	4.77	□□□□□ -1.65
TRK1	YJL129C	ETT1	Q08421	412 aa	Known RBP	4.77	□□□□□ -1.65
TRK1	YJL129C	TCB3	Q03640	1545 aa	Known RBP	4.75	□□□□□ -1.65
TRK1	YJL129C	SGS1	P35187	1447 aa		4.75	□□□□□ -1.65
TRK1	YJL129C	RPC31	P17890	251 aa		4.75	□□□□□ -1.65
TRK1	YJL129C	SPA2	P23201	1466 aa	Known RBP	4.75	□□□□□ -1.65
TRK1	YJL129C	OPY1	P38271	328 aa		4.75	□□□□□ -1.65
TRK1	YJL129C	PAF1	P38351	445 aa		4.75	□□□□□ -1.65
TRK1	YJL129C	CFT1	Q06632	1357 aa	Known RBP	4.74	□□□□□ -1.65
TRK1	YJL129C	MSH3	P25336	1018 aa		4.74	□□□□□ -1.65
TRK1	YJL129C	YTA7	P40340	1379 aa		4.74	□□□□□ -1.65
TRK1	YJL129C	NNF2	P53253	936 aa		4.74	□□□□□ -1.65
TRK1	YJL129C	TOP1	P04786	769 aa		4.74	□□□□□ -1.65
TRK1	YJL129C	CTR9	P89105	1077 aa		4.73	□□□□□ -1.65
TRK1	YJL129C	ECM16	Q04217	1267 aa	Known RBP	4.73	□□□□□ -1.65
TRK1	YJL129C	SSN2	P38931	1420 aa		4.72	□□□□□ -1.65
TRK1	YJL129C	CLB5	P30283	435 aa		4.72	□□□□□ -1.65
TRK1	YJL129C	MSH4	P40965	878 aa	Predicted RBP	4.72	□□□□□ -1.65
TRK1	YJL129C	PIL1	P53252	339 aa	Known RBP	4.72	□□□□□ -1.65
TRK1	YJL129C	MDG1	P53885	366 aa		4.72	□□□□□ -1.65
TRK1	YJL129C	STH1	P32597	1359 aa		4.72	□□□□□ -1.65
TRK1	YJL129C	INO80	P53115	1489 aa		4.72	□□□□□ -1.65
TRK1	YJL129C	PLP2	Q12017	286 aa		4.72	□□□□□ -1.65
TRK1	YJL129C	YPP1	P46951	817 aa		4.71	□□□□□ -1.65
TRK1	YJL129C	ORC1	P54784	914 aa	Predicted RBP	4.71	□□□□□ -1.65
TRK1	YJL129C	SNF7	P39929	240 aa	Known RBP	4.71	□□□□□ -1.66
TRK1	YJL129C	PAP2	P53632	584 aa	Known RBP	4.71	□□□□□ -1.66
TRK1	YJL129C	NOP58	Q12499	511 aa	Known RBP	4.71	□□□□□ -1.66
TRK1	YJL129C	SSA1	P10591	642 aa	Known RBP	4.7	□□□□□ -1.66
TRK1	YJL129C	SSA2	P10592	639 aa	Known RBP	4.7	□□□□□ -1.66
TRK1	YJL129C	DSN1	P40568	576 aa		4.7	□□□□□ -1.66
TRK1	YJL129C	RPS0A	P32905	252 aa	Known RBP	4.7	□□□□□ -1.66
TRK1	YJL129C	PRP3	Q03338	469 aa	Predicted RBP	4.69	□□□□□ -1.66
TRK1	YJL129C	RPN7	Q06103	429 aa	Known RBP	4.69	□□□□□ -1.66
TRK1	YJL129C	YSH1	Q06224	779 aa	Predicted RBP	4.69	□□□□□ -1.66
TRK1	YJL129C	DJP1	P40564	432 aa		4.69	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 30.2 ms