Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
COL1A2P08123 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC22.81■■□□□ 1.24
COL1A2P08123 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
COL1A2P08123 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC22.81■■□□□ 1.24
COL1A2P08123 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
COL1A2P08123 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
COL1A2P08123 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
COL1A2P08123 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
COL1A2P08123 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
COL1A2P08123 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
COL1A2P08123 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
COL1A2P08123 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
COL1A2P08123 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC22.8■■□□□ 1.24
COL1A2P08123 ESRRAP1-201ENST00000400596 1257 ntBASIC22.8■■□□□ 1.24
COL1A2P08123 PGM5P4-201ENST00000421970 445 ntBASIC22.8■■□□□ 1.24
COL1A2P08123 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC22.8■■□□□ 1.24
COL1A2P08123 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC22.8■■□□□ 1.24
COL1A2P08123 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
COL1A2P08123 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
COL1A2P08123 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
COL1A2P08123 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.8■■□□□ 1.24
COL1A2P08123 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC22.8■■□□□ 1.24
COL1A2P08123 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC22.8■■□□□ 1.24
COL1A2P08123 NXN-202ENST00000537628 1340 ntTSL 3 BASIC22.8■■□□□ 1.24
COL1A2P08123 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC22.8■■□□□ 1.24
COL1A2P08123 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
COL1A2P08123 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
COL1A2P08123 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
COL1A2P08123 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
COL1A2P08123 KRT18P29-201ENST00000397031 1267 ntBASIC22.79■■□□□ 1.24
COL1A2P08123 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
COL1A2P08123 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
COL1A2P08123 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC22.79■■□□□ 1.24
COL1A2P08123 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC22.79■■□□□ 1.24
COL1A2P08123 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
COL1A2P08123 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22.79■■□□□ 1.24
COL1A2P08123 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.79■■□□□ 1.24
COL1A2P08123 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
COL1A2P08123 DYM-203ENST00000442713 2147 ntTSL 2 BASIC22.79■■□□□ 1.24
COL1A2P08123 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
COL1A2P08123 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.79■■□□□ 1.24
COL1A2P08123 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
COL1A2P08123 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
COL1A2P08123 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC22.78■■□□□ 1.24
COL1A2P08123 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
COL1A2P08123 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC22.78■■□□□ 1.24
COL1A2P08123 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
COL1A2P08123 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC22.78■■□□□ 1.24
COL1A2P08123 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
COL1A2P08123 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
COL1A2P08123 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC22.78■■□□□ 1.24
COL1A2P08123 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC22.78■■□□□ 1.24
COL1A2P08123 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
COL1A2P08123 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.78■■□□□ 1.24
COL1A2P08123 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
COL1A2P08123 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
COL1A2P08123 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
COL1A2P08123 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
COL1A2P08123 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC22.77■■□□□ 1.24
COL1A2P08123 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC22.77■■□□□ 1.24
COL1A2P08123 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC22.77■■□□□ 1.24
COL1A2P08123 AC026366.1-201ENST00000488803 879 ntBASIC22.77■■□□□ 1.24
COL1A2P08123 AP003097.1-201ENST00000530657 1135 ntBASIC22.77■■□□□ 1.24
COL1A2P08123 MMAB-206ENST00000540016 945 ntTSL 3 BASIC22.77■■□□□ 1.24
COL1A2P08123 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC22.77■■□□□ 1.24
COL1A2P08123 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
COL1A2P08123 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC22.77■■□□□ 1.24
COL1A2P08123 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC22.77■■□□□ 1.24
COL1A2P08123 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.77■■□□□ 1.24
COL1A2P08123 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC22.77■■□□□ 1.24
COL1A2P08123 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.77■■□□□ 1.24
COL1A2P08123 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC22.77■■□□□ 1.24
COL1A2P08123 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
COL1A2P08123 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
COL1A2P08123 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
COL1A2P08123 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
COL1A2P08123 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC22.77■■□□□ 1.24
COL1A2P08123 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
COL1A2P08123 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC22.76■■□□□ 1.23
COL1A2P08123 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
COL1A2P08123 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC22.76■■□□□ 1.23
COL1A2P08123 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC22.76■■□□□ 1.23
COL1A2P08123 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
COL1A2P08123 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
COL1A2P08123 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22.76■■□□□ 1.23
COL1A2P08123 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.76■■□□□ 1.23
COL1A2P08123 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
COL1A2P08123 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC22.76■■□□□ 1.23
COL1A2P08123 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
COL1A2P08123 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
COL1A2P08123 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
COL1A2P08123 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC22.76■■□□□ 1.23
COL1A2P08123 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC22.76■■□□□ 1.23
COL1A2P08123 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
COL1A2P08123 PRORSD1P-201ENST00000295112 541 ntBASIC22.76■■□□□ 1.23
COL1A2P08123 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
COL1A2P08123 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC22.76■■□□□ 1.23
COL1A2P08123 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC22.76■■□□□ 1.23
COL1A2P08123 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
COL1A2P08123 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC22.75■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms