RNA–Protein interactions for RNA: ENST00000396061.5

GTF2A2-203, Transcript of general transcription factor IIA subunit 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GTF2A2, Length 758 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-203ENST00000396061 NISCHQ9Y2I1 1504 aa49.95■■■■■ 5.59
GTF2A2-203ENST00000396061 CCDC180Q9P1Z9 1646 aa44.5■■■■■ 4.71
GTF2A2-203ENST00000396061 ABCC9O60706 1549 aa44.45■■■■■ 4.71
GTF2A2-203ENST00000396061 RB1CC1Q8TDY2 1594 aa42.29■■■■■ 4.36
GTF2A2-203ENST00000396061 DCAF8L2P0C7V8 631 aa42.18■■■■■ 4.34
GTF2A2-203ENST00000396061 NACADO15069 1562 aa42.1■■■■■ 4.33
GTF2A2-203ENST00000396061 MYO15BQ96JP2 1530 aa41.6■■■■■ 4.25
GTF2A2-203ENST00000396061 DNAJC5BQ9UF47 199 aa41.58■■■■■ 4.25
GTF2A2-203ENST00000396061 PABPN1Q86U42 306 aaKnown RBP eCLIP41.55■■■■■ 4.24
GTF2A2-203ENST00000396061 ZCCHC6Q5VYS8 1495 aaKnown RBP41.45■■■■■ 4.23
GTF2A2-203ENST00000396061 UNC13AQ9UPW8 1703 aa41.27■■■■■ 4.2
GTF2A2-203ENST00000396061 DCAF1Q9Y4B6 1507 aa41.2■■■■■ 4.19
GTF2A2-203ENST00000396061 BICRAQ9NZM4 1560 aa41.14■■■■■ 4.18
GTF2A2-203ENST00000396061 SCRIBQ14160 1630 aa40.72■■■■■ 4.11
GTF2A2-203ENST00000396061 SHROOM4Q9ULL8 1493 aa40.48■■■■■ 4.07
GTF2A2-203ENST00000396061 CC2D2AQ9P2K1 1620 aa40.08■■■■■ 4.01
GTF2A2-203ENST00000396061 EIF4G1Q04637 1599 aaKnown RBP40.07■■■■■ 4.01
GTF2A2-203ENST00000396061 CECR2Q9BXF3 1484 aa39.98■■■■□ 3.99
GTF2A2-203ENST00000396061 NCAPD3P42695 1498 aa38.94■■■■□ 3.82
GTF2A2-203ENST00000396061 ATAD2BQ9ULI0 1458 aa38.9■■■■□ 3.82
GTF2A2-203ENST00000396061 SMARCA4P51532 1647 aa38.84■■■■□ 3.81
GTF2A2-203ENST00000396061 SMARCA2P51531 1590 aa38.7■■■■□ 3.79
GTF2A2-203ENST00000396061 BAZ1AQ9NRL2 1556 aaPredicted RBP38.69■■■■□ 3.78
GTF2A2-203ENST00000396061 HMGXB3Q12766 1538 aa38.59■■■■□ 3.77
GTF2A2-203ENST00000396061 MROH2BQ7Z745 1585 aa38.54■■■■□ 3.76
GTF2A2-203ENST00000396061 BAZ1BQ9UIG0 1483 aaKnown RBP38.48■■■■□ 3.75
GTF2A2-203ENST00000396061 PEG3Q9GZU2 1588 aa38.44■■■■□ 3.74
GTF2A2-203ENST00000396061 NESP48681 1621 aa38.3■■■■□ 3.72
GTF2A2-203ENST00000396061 ERCC6Q03468 1493 aa38.29■■■■□ 3.72
GTF2A2-203ENST00000396061 CUX2O14529 1486 aa38.07■■■■□ 3.68
GTF2A2-203ENST00000396061 WIZO95785 1651 aa38.02■■■■□ 3.68
GTF2A2-203ENST00000396061 LAMC3Q9Y6N6 1575 aa37.9■■■■□ 3.66
GTF2A2-203ENST00000396061 RSF1Q96T23 1441 aaPredicted RBP37.89■■■■□ 3.66
GTF2A2-203ENST00000396061 DNAJC5Q9H3Z4 198 aa37.85■■■■□ 3.65
GTF2A2-203ENST00000396061 CADPSQ9ULU8 1353 aa37.8■■■■□ 3.64
GTF2A2-203ENST00000396061 PDS5BQ9NTI5 1447 aa37.76■■■■□ 3.63
GTF2A2-203ENST00000396061 THOC2Q8NI27 1593 aaKnown RBP37.71■■■■□ 3.63
GTF2A2-203ENST00000396061 KIF21AQ7Z4S6 1674 aa37.64■■■■□ 3.62
GTF2A2-203ENST00000396061 TOP2AP11388 1531 aaKnown RBP37.55■■■■□ 3.6
GTF2A2-203ENST00000396061 CFTRP13569 1480 aa37.41■■■■□ 3.58
GTF2A2-203ENST00000396061 MRC2Q9UBG0 1479 aa37.41■■■■□ 3.58
GTF2A2-203ENST00000396061 FANCD2Q9BXW9 1451 aa37.35■■■■□ 3.57
GTF2A2-203ENST00000396061 CEP164Q9UPV0 1460 aa37.32■■■■□ 3.56
GTF2A2-203ENST00000396061 WDR62O43379 1518 aa37.28■■■■□ 3.56
GTF2A2-203ENST00000396061 CCDC88BA6NC98 1476 aa37.21■■■■□ 3.55
GTF2A2-203ENST00000396061 URB2Q14146 1524 aaKnown RBP37.05■■■■□ 3.52
GTF2A2-203ENST00000396061 PRDM2Q13029 1718 aa36.8■■■■□ 3.48
GTF2A2-203ENST00000396061 TOPBP1Q92547 1522 aa36.68■■■■□ 3.46
GTF2A2-203ENST00000396061 ZNF608Q9ULD9 1512 aaPredicted RBP36.58■■■■□ 3.45
GTF2A2-203ENST00000396061 IFT140Q96RY7 1462 aa36.57■■■■□ 3.45
GTF2A2-203ENST00000396061 ABCC8Q09428 1581 aa36.53■■■■□ 3.44
GTF2A2-203ENST00000396061 SUPT5HO00267 1087 aaKnown RBP36.52■■■■□ 3.44
GTF2A2-203ENST00000396061 DNMBPQ6XZF7 1577 aa36.5■■■■□ 3.43
GTF2A2-203ENST00000396061 OSCARQ8IYS5 282 aa36.5■■■■□ 3.43
GTF2A2-203ENST00000396061 TRIM41Q8WV44 630 aa36.35■■■■□ 3.41
GTF2A2-203ENST00000396061 POLA1P09884 1462 aaPredicted RBP36.33■■■■□ 3.41
GTF2A2-203ENST00000396061 AQRO60306 1485 aaKnown RBP eCLIP36.3■■■■□ 3.42e-8■□□□□ 8.7
GTF2A2-203ENST00000396061 TARBP1Q13395 1621 aaKnown RBP36.28■■■■□ 3.4
GTF2A2-203ENST00000396061 RAD54L2Q9Y4B4 1467 aa36.25■■■■□ 3.39
GTF2A2-203ENST00000396061 EIF4G3O43432 1585 aaKnown RBP36.25■■■■□ 3.39
GTF2A2-203ENST00000396061 SOGA1O94964 1423 aa36.19■■■■□ 3.38
GTF2A2-203ENST00000396061 CUX1P39880 1505 aa36.18■■■■□ 3.38
GTF2A2-203ENST00000396061 TDRD9Q8NDG6 1382 aaKnown RBP36.15■■■■□ 3.38
GTF2A2-203ENST00000396061 FGD5Q6ZNL6 1462 aa36.14■■■■□ 3.38
GTF2A2-203ENST00000396061 FBLN2P98095 1184 aa36.01■■■■□ 3.36
GTF2A2-203ENST00000396061 RIMBP3CA6NJZ7 1639 aa35.89■■■■□ 3.34
GTF2A2-203ENST00000396061 RIMBP3BA6NNM3 1639 aa35.89■■■■□ 3.34
GTF2A2-203ENST00000396061 RIMBP3Q9UFD9 1639 aa35.89■■■■□ 3.34
GTF2A2-203ENST00000396061 CHD1O14646 1710 aa35.88■■■■□ 3.33
GTF2A2-203ENST00000396061 SNAPC4Q5SXM2 1469 aa35.87■■■■□ 3.33
GTF2A2-203ENST00000396061 ARHGEF11O15085 1522 aa35.85■■■■□ 3.33
GTF2A2-203ENST00000396061 WDR97A6NE52 1622 aa35.8■■■■□ 3.32
GTF2A2-203ENST00000396061 GRIN2BQ13224 1484 aa35.8■■■■□ 3.32
GTF2A2-203ENST00000396061 CHMP7Q8WUX9 453 aaPredicted RBP35.76■■■■□ 3.32
GTF2A2-203ENST00000396061 GAPVD1Q14C86 1478 aa35.73■■■■□ 3.31
GTF2A2-203ENST00000396061 MAGI1Q96QZ7 1491 aaPredicted RBP35.73■■■■□ 3.31
GTF2A2-203ENST00000396061 ABCA10Q8WWZ4 1543 aa35.73■■■■□ 3.31
GTF2A2-203ENST00000396061 WRNQ14191 1432 aaPredicted RBP eCLIP35.68■■■■□ 3.3
GTF2A2-203ENST00000396061 CYB5RLQ6IPT4 315 aa35.68■■■■□ 3.3
GTF2A2-203ENST00000396061 SYNJ2O15056 1496 aa35.63■■■■□ 3.29
GTF2A2-203ENST00000396061 SYNJ1O43426 1573 aa35.62■■■■□ 3.29
GTF2A2-203ENST00000396061 TOP2BQ02880 1626 aa35.59■■■■□ 3.29
GTF2A2-203ENST00000396061 ABCA5Q8WWZ7 1642 aa35.59■■■■□ 3.29
GTF2A2-203ENST00000396061 ARAP1Q96P48 1450 aa35.56■■■■□ 3.28
GTF2A2-203ENST00000396061 CLASP1Q7Z460 1538 aa35.56■■■■□ 3.28
GTF2A2-203ENST00000396061 BIVM-ERCC5R4GMW8 1640 aa35.55■■■■□ 3.28
GTF2A2-203ENST00000396061 PBRM1Q86U86 1689 aa35.54■■■■□ 3.28
GTF2A2-203ENST00000396061 GRIN2AQ12879 1464 aa35.34■■■■□ 3.25
GTF2A2-203ENST00000396061 ADAMTS12P58397 1594 aa35.31■■■■□ 3.24
GTF2A2-203ENST00000396061 FHAD1B1AJZ9 1412 aa35.29■■■■□ 3.24
GTF2A2-203ENST00000396061 ERICH3Q5RHP9 1530 aa35.24■■■■□ 3.23
GTF2A2-203ENST00000396061 NUP160Q12769 1436 aa35.23■■■■□ 3.23
GTF2A2-203ENST00000396061 CEP170Q5SW79 1584 aa35.19■■■■□ 3.22
GTF2A2-203ENST00000396061 TRHP20396 242 aaPredicted RBP35.14■■■■□ 3.22
GTF2A2-203ENST00000396061 ERCC6L2Q5T890 1561 aa35.11■■■■□ 3.21
GTF2A2-203ENST00000396061 IGF1RP08069 1367 aa35.02■■■■□ 3.2
GTF2A2-203ENST00000396061 KIF27Q86VH2 1401 aa34.97■■■■□ 3.19
GTF2A2-203ENST00000396061 SHROOM2Q13796 1616 aa34.95■■■■□ 3.18
GTF2A2-203ENST00000396061 JPH4Q96JJ6 628 aa34.94■■■■□ 3.18
GTF2A2-203ENST00000396061 PRG4Q92954 1404 aaPredicted RBP34.89■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms