RNA–Protein interactions for RNA: ENST00000585575.5

NFIX-205, Transcript of nuclear factor I X, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NFIX, Length 1,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-205ENST00000585575 NISCHQ9Y2I1 1504 aa49.27■■■■■ 5.48
NFIX-205ENST00000585575 CCDC180Q9P1Z9 1646 aa43.77■■■■■ 4.6
NFIX-205ENST00000585575 ABCC9O60706 1549 aa42.93■■■■■ 4.46
NFIX-205ENST00000585575 RB1CC1Q8TDY2 1594 aa41.24■■■■■ 4.19
NFIX-205ENST00000585575 NACADO15069 1562 aa41.2■■■■■ 4.19
NFIX-205ENST00000585575 DCAF8L2P0C7V8 631 aa41.2■■■■■ 4.19
NFIX-205ENST00000585575 ZCCHC6Q5VYS8 1495 aaKnown RBP41.02■■■■■ 4.16
NFIX-205ENST00000585575 MYO15BQ96JP2 1530 aa40.96■■■■■ 4.15
NFIX-205ENST00000585575 DCAF1Q9Y4B6 1507 aa40.75■■■■■ 4.11
NFIX-205ENST00000585575 UNC13AQ9UPW8 1703 aa40.29■■■■■ 4.04
NFIX-205ENST00000585575 PABPN1Q86U42 306 aaKnown RBP eCLIP40.14■■■■■ 4.02
NFIX-205ENST00000585575 BICRAQ9NZM4 1560 aa40.03■■■■■ 4
NFIX-205ENST00000585575 SCRIBQ14160 1630 aa39.94■■■■□ 3.98
NFIX-205ENST00000585575 SHROOM4Q9ULL8 1493 aa39.58■■■■□ 3.93
NFIX-205ENST00000585575 DNAJC5BQ9UF47 199 aa39.53■■■■□ 3.92
NFIX-205ENST00000585575 EIF4G1Q04637 1599 aaKnown RBP38.96■■■■□ 3.83
NFIX-205ENST00000585575 CC2D2AQ9P2K1 1620 aa38.82■■■■□ 3.81
NFIX-205ENST00000585575 CECR2Q9BXF3 1484 aa38.59■■■■□ 3.77
NFIX-205ENST00000585575 SMARCA4P51532 1647 aa38.21■■■■□ 3.71
NFIX-205ENST00000585575 BAZ1AQ9NRL2 1556 aaPredicted RBP38.16■■■■□ 3.7
NFIX-205ENST00000585575 NCAPD3P42695 1498 aa38.05■■■■□ 3.68
NFIX-205ENST00000585575 ATAD2BQ9ULI0 1458 aa38.05■■■■□ 3.68
NFIX-205ENST00000585575 SMARCA2P51531 1590 aa37.98■■■■□ 3.67
NFIX-205ENST00000585575 MROH2BQ7Z745 1585 aa37.97■■■■□ 3.67
NFIX-205ENST00000585575 PEG3Q9GZU2 1588 aa37.86■■■■□ 3.65
NFIX-205ENST00000585575 HMGXB3Q12766 1538 aa37.82■■■■□ 3.64
NFIX-205ENST00000585575 BAZ1BQ9UIG0 1483 aaKnown RBP37.71■■■■□ 3.63
NFIX-205ENST00000585575 RSF1Q96T23 1441 aaPredicted RBP37.53■■■■□ 3.6
NFIX-205ENST00000585575 WIZO95785 1651 aa37.53■■■■□ 3.6
NFIX-205ENST00000585575 NESP48681 1621 aa37.14■■■■□ 3.54
NFIX-205ENST00000585575 TOP2AP11388 1531 aaKnown RBP37.13■■■■□ 3.53
NFIX-205ENST00000585575 LAMC3Q9Y6N6 1575 aa37.01■■■■□ 3.52
NFIX-205ENST00000585575 ERCC6Q03468 1493 aa36.99■■■■□ 3.51
NFIX-205ENST00000585575 CADPSQ9ULU8 1353 aa36.94■■■■□ 3.5
NFIX-205ENST00000585575 PDS5BQ9NTI5 1447 aa36.79■■■■□ 3.48
NFIX-205ENST00000585575 CCDC88BA6NC98 1476 aa36.73■■■■□ 3.47
NFIX-205ENST00000585575 CFTRP13569 1480 aa36.71■■■■□ 3.47
NFIX-205ENST00000585575 KIF21AQ7Z4S6 1674 aa36.65■■■■□ 3.46
NFIX-205ENST00000585575 CUX2O14529 1486 aa36.64■■■■□ 3.46
NFIX-205ENST00000585575 THOC2Q8NI27 1593 aaKnown RBP36.56■■■■□ 3.44
NFIX-205ENST00000585575 SUPT5HO00267 1087 aaKnown RBP36.54■■■■□ 3.44
NFIX-205ENST00000585575 FANCD2Q9BXW9 1451 aa36.49■■■■□ 3.43
NFIX-205ENST00000585575 CEP164Q9UPV0 1460 aa36.43■■■■□ 3.42
NFIX-205ENST00000585575 MRC2Q9UBG0 1479 aa36.4■■■■□ 3.42
NFIX-205ENST00000585575 PRDM2Q13029 1718 aa36.33■■■■□ 3.41
NFIX-205ENST00000585575 WDR62O43379 1518 aa36.29■■■■□ 3.4
NFIX-205ENST00000585575 URB2Q14146 1524 aaKnown RBP36.14■■■■□ 3.38
NFIX-205ENST00000585575 TOPBP1Q92547 1522 aa35.91■■■■□ 3.34
NFIX-205ENST00000585575 ABCC8Q09428 1581 aa35.9■■■■□ 3.34
NFIX-205ENST00000585575 DNMBPQ6XZF7 1577 aa35.83■■■■□ 3.33
NFIX-205ENST00000585575 IFT140Q96RY7 1462 aa35.69■■■■□ 3.3
NFIX-205ENST00000585575 DNAJC5Q9H3Z4 198 aa35.63■■■■□ 3.29
NFIX-205ENST00000585575 CUX1P39880 1505 aa35.62■■■■□ 3.29
NFIX-205ENST00000585575 POLA1P09884 1462 aaPredicted RBP35.6■■■■□ 3.29
NFIX-205ENST00000585575 ZNF608Q9ULD9 1512 aaPredicted RBP35.55■■■■□ 3.28
NFIX-205ENST00000585575 TARBP1Q13395 1621 aaKnown RBP35.51■■■■□ 3.28
NFIX-205ENST00000585575 FGD5Q6ZNL6 1462 aa35.5■■■■□ 3.27
NFIX-205ENST00000585575 SOGA1O94964 1423 aa35.47■■■■□ 3.27
NFIX-205ENST00000585575 RAD54L2Q9Y4B4 1467 aa35.46■■■■□ 3.27
NFIX-205ENST00000585575 WRNQ14191 1432 aaPredicted RBP eCLIP35.37■■■■□ 3.25
NFIX-205ENST00000585575 EIF4G3O43432 1585 aaKnown RBP35.36■■■■□ 3.25
NFIX-205ENST00000585575 AQRO60306 1485 aaKnown RBP eCLIP35.36■■■■□ 3.258e-7■■■■□ 22.8
NFIX-205ENST00000585575 TDRD9Q8NDG6 1382 aaKnown RBP35.28■■■■□ 3.24
NFIX-205ENST00000585575 TOP2BQ02880 1626 aa35.28■■■■□ 3.24
NFIX-205ENST00000585575 SYNJ1O43426 1573 aa35.27■■■■□ 3.24
NFIX-205ENST00000585575 BIVM-ERCC5R4GMW8 1640 aa35.25■■■■□ 3.23
NFIX-205ENST00000585575 WDR97A6NE52 1622 aa35.2■■■■□ 3.23
NFIX-205ENST00000585575 ABCA10Q8WWZ4 1543 aa35.17■■■■□ 3.22
NFIX-205ENST00000585575 OSCARQ8IYS5 282 aa35.15■■■■□ 3.22
NFIX-205ENST00000585575 GRIN2BQ13224 1484 aa35.04■■■■□ 3.2
NFIX-205ENST00000585575 GAPVD1Q14C86 1478 aa35.04■■■■□ 3.2
NFIX-205ENST00000585575 ABCA5Q8WWZ7 1642 aa35■■■■□ 3.19
NFIX-205ENST00000585575 SNAPC4Q5SXM2 1469 aa34.99■■■■□ 3.19
NFIX-205ENST00000585575 MAGI1Q96QZ7 1491 aaPredicted RBP34.95■■■■□ 3.19
NFIX-205ENST00000585575 FBLN2P98095 1184 aa34.93■■■■□ 3.18
NFIX-205ENST00000585575 PBRM1Q86U86 1689 aa34.91■■■■□ 3.18
NFIX-205ENST00000585575 CHD1O14646 1710 aa34.91■■■■□ 3.18
NFIX-205ENST00000585575 CHMP7Q8WUX9 453 aaPredicted RBP34.84■■■■□ 3.17
NFIX-205ENST00000585575 SYNJ2O15056 1496 aa34.82■■■■□ 3.16
NFIX-205ENST00000585575 ERICH3Q5RHP9 1530 aa34.73■■■■□ 3.15
NFIX-205ENST00000585575 ADAMTS12P58397 1594 aa34.67■■■■□ 3.14
NFIX-205ENST00000585575 FHAD1B1AJZ9 1412 aa34.64■■■■□ 3.14
NFIX-205ENST00000585575 KIF27Q86VH2 1401 aa34.63■■■■□ 3.13
NFIX-205ENST00000585575 GRIN2AQ12879 1464 aa34.59■■■■□ 3.13
NFIX-205ENST00000585575 CLASP1Q7Z460 1538 aa34.57■■■■□ 3.13
NFIX-205ENST00000585575 IGF1RP08069 1367 aa34.55■■■■□ 3.12
NFIX-205ENST00000585575 ARHGEF11O15085 1522 aa34.54■■■■□ 3.12
NFIX-205ENST00000585575 RIMBP3CA6NJZ7 1639 aa34.53■■■■□ 3.12
NFIX-205ENST00000585575 RIMBP3BA6NNM3 1639 aa34.53■■■■□ 3.12
NFIX-205ENST00000585575 RIMBP3Q9UFD9 1639 aa34.53■■■■□ 3.12
NFIX-205ENST00000585575 TRIM41Q8WV44 630 aa34.52■■■■□ 3.12
NFIX-205ENST00000585575 NUP160Q12769 1436 aa34.46■■■■□ 3.11
NFIX-205ENST00000585575 CEP170Q5SW79 1584 aa34.41■■■■□ 3.1
NFIX-205ENST00000585575 CUL7Q14999 1698 aa34.37■■■■□ 3.09
NFIX-205ENST00000585575 RUSC2Q8N2Y8 1516 aa34.33■■■■□ 3.09
NFIX-205ENST00000585575 CARMIL1Q5VZK9 1371 aa34.32■■■■□ 3.08
NFIX-205ENST00000585575 ARAP1Q96P48 1450 aa34.27■■■■□ 3.08
NFIX-205ENST00000585575 CYB5RLQ6IPT4 315 aa34.27■■■■□ 3.08
NFIX-205ENST00000585575 SHROOM2Q13796 1616 aa34.18■■■■□ 3.06
NFIX-205ENST00000585575 JPH4Q96JJ6 628 aa34.14■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms