RNA–Protein interactions for RNA: ENST00000540016.5

MMAB-206, Transcript of methylmalonic aciduria (cobalamin deficiency) cblB type, humanhuman

TSL 3 BASIC

Gene MMAB, Length 945 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMAB-206ENST00000540016 NISCHQ9Y2I1 1504 aa49.88■■■■■ 5.58
MMAB-206ENST00000540016 CCDC180Q9P1Z9 1646 aa44.53■■■■■ 4.72
MMAB-206ENST00000540016 ABCC9O60706 1549 aa44.32■■■■■ 4.69
MMAB-206ENST00000540016 RB1CC1Q8TDY2 1594 aa42.29■■■■■ 4.36
MMAB-206ENST00000540016 NACADO15069 1562 aa42.1■■■■■ 4.33
MMAB-206ENST00000540016 DCAF8L2P0C7V8 631 aa42.03■■■■■ 4.32
MMAB-206ENST00000540016 MYO15BQ96JP2 1530 aa41.64■■■■■ 4.26
MMAB-206ENST00000540016 DNAJC5BQ9UF47 199 aa41.4■■■■■ 4.22
MMAB-206ENST00000540016 PABPN1Q86U42 306 aaKnown RBP eCLIP41.39■■■■■ 4.22
MMAB-206ENST00000540016 ZCCHC6Q5VYS8 1495 aaKnown RBP41.38■■■■■ 4.21
MMAB-206ENST00000540016 UNC13AQ9UPW8 1703 aa41.28■■■■■ 4.2
MMAB-206ENST00000540016 DCAF1Q9Y4B6 1507 aa41.22■■■■■ 4.19
MMAB-206ENST00000540016 BICRAQ9NZM4 1560 aa41.07■■■■■ 4.16
MMAB-206ENST00000540016 SCRIBQ14160 1630 aa40.63■■■■■ 4.09
MMAB-206ENST00000540016 SHROOM4Q9ULL8 1493 aa40.54■■■■■ 4.08
MMAB-206ENST00000540016 CC2D2AQ9P2K1 1620 aa40.03■■■■■ 4
MMAB-206ENST00000540016 EIF4G1Q04637 1599 aaKnown RBP40.03■■■■■ 4
MMAB-206ENST00000540016 CECR2Q9BXF3 1484 aa39.91■■■■□ 3.98
MMAB-206ENST00000540016 NCAPD3P42695 1498 aa38.91■■■■□ 3.82
MMAB-206ENST00000540016 ATAD2BQ9ULI0 1458 aa38.82■■■■□ 3.81
MMAB-206ENST00000540016 SMARCA4P51532 1647 aa38.8■■■■□ 3.8
MMAB-206ENST00000540016 SMARCA2P51531 1590 aa38.69■■■■□ 3.78
MMAB-206ENST00000540016 BAZ1AQ9NRL2 1556 aaPredicted RBP38.67■■■■□ 3.78
MMAB-206ENST00000540016 HMGXB3Q12766 1538 aa38.58■■■■□ 3.77
MMAB-206ENST00000540016 PEG3Q9GZU2 1588 aa38.44■■■■□ 3.74
MMAB-206ENST00000540016 MROH2BQ7Z745 1585 aa38.44■■■■□ 3.74
MMAB-206ENST00000540016 BAZ1BQ9UIG0 1483 aaKnown RBP38.43■■■■□ 3.74
MMAB-206ENST00000540016 ERCC6Q03468 1493 aa38.24■■■■□ 3.71
MMAB-206ENST00000540016 NESP48681 1621 aa38.17■■■■□ 3.7
MMAB-206ENST00000540016 CUX2O14529 1486 aa38.07■■■■□ 3.68
MMAB-206ENST00000540016 WIZO95785 1651 aa37.95■■■■□ 3.66
MMAB-206ENST00000540016 LAMC3Q9Y6N6 1575 aa37.92■■■■□ 3.66
MMAB-206ENST00000540016 DNAJC5Q9H3Z4 198 aa37.79■■■■□ 3.64
MMAB-206ENST00000540016 RSF1Q96T23 1441 aaPredicted RBP37.78■■■■□ 3.64
MMAB-206ENST00000540016 CADPSQ9ULU8 1353 aa37.75■■■■□ 3.63
MMAB-206ENST00000540016 PDS5BQ9NTI5 1447 aa37.75■■■■□ 3.63
MMAB-206ENST00000540016 THOC2Q8NI27 1593 aaKnown RBP37.66■■■■□ 3.62
MMAB-206ENST00000540016 KIF21AQ7Z4S6 1674 aa37.61■■■■□ 3.61
MMAB-206ENST00000540016 TOP2AP11388 1531 aaKnown RBP37.5■■■■□ 3.59
MMAB-206ENST00000540016 CFTRP13569 1480 aa37.37■■■■□ 3.57
MMAB-206ENST00000540016 MRC2Q9UBG0 1479 aa37.37■■■■□ 3.57
MMAB-206ENST00000540016 FANCD2Q9BXW9 1451 aa37.28■■■■□ 3.56
MMAB-206ENST00000540016 CEP164Q9UPV0 1460 aa37.27■■■■□ 3.56
MMAB-206ENST00000540016 WDR62O43379 1518 aa37.25■■■■□ 3.55
MMAB-206ENST00000540016 CCDC88BA6NC98 1476 aa37.12■■■■□ 3.53
MMAB-206ENST00000540016 URB2Q14146 1524 aaKnown RBP36.95■■■■□ 3.51
MMAB-206ENST00000540016 PRDM2Q13029 1718 aa36.88■■■■□ 3.49
MMAB-206ENST00000540016 TOPBP1Q92547 1522 aa36.6■■■■□ 3.45
MMAB-206ENST00000540016 ABCC8Q09428 1581 aa36.56■■■■□ 3.44
MMAB-206ENST00000540016 IFT140Q96RY7 1462 aa36.54■■■■□ 3.44
MMAB-206ENST00000540016 DNMBPQ6XZF7 1577 aa36.47■■■■□ 3.43
MMAB-206ENST00000540016 ZNF608Q9ULD9 1512 aaPredicted RBP36.46■■■■□ 3.43
MMAB-206ENST00000540016 OSCARQ8IYS5 282 aa36.46■■■■□ 3.43
MMAB-206ENST00000540016 SUPT5HO00267 1087 aaKnown RBP36.36■■■■□ 3.41
MMAB-206ENST00000540016 POLA1P09884 1462 aaPredicted RBP36.26■■■■□ 3.4
MMAB-206ENST00000540016 TARBP1Q13395 1621 aaKnown RBP36.24■■■■□ 3.39
MMAB-206ENST00000540016 TRIM41Q8WV44 630 aa36.22■■■■□ 3.39
MMAB-206ENST00000540016 EIF4G3O43432 1585 aaKnown RBP36.2■■■■□ 3.39
MMAB-206ENST00000540016 AQRO60306 1485 aaKnown RBP eCLIP36.18■■■■□ 3.387e-9■■■■■ 34.8
MMAB-206ENST00000540016 RAD54L2Q9Y4B4 1467 aa36.13■■■■□ 3.37
MMAB-206ENST00000540016 SOGA1O94964 1423 aa36.13■■■■□ 3.37
MMAB-206ENST00000540016 CUX1P39880 1505 aa36.08■■■■□ 3.37
MMAB-206ENST00000540016 FGD5Q6ZNL6 1462 aa36.06■■■■□ 3.36
MMAB-206ENST00000540016 TDRD9Q8NDG6 1382 aaKnown RBP36.02■■■■□ 3.36
MMAB-206ENST00000540016 FBLN2P98095 1184 aa35.9■■■■□ 3.34
MMAB-206ENST00000540016 WDR97A6NE52 1622 aa35.87■■■■□ 3.33
MMAB-206ENST00000540016 CHD1O14646 1710 aa35.86■■■■□ 3.33
MMAB-206ENST00000540016 RIMBP3CA6NJZ7 1639 aa35.84■■■■□ 3.33
MMAB-206ENST00000540016 RIMBP3BA6NNM3 1639 aa35.84■■■■□ 3.33
MMAB-206ENST00000540016 RIMBP3Q9UFD9 1639 aa35.84■■■■□ 3.33
MMAB-206ENST00000540016 ARHGEF11O15085 1522 aa35.79■■■■□ 3.32
MMAB-206ENST00000540016 SNAPC4Q5SXM2 1469 aa35.79■■■■□ 3.32
MMAB-206ENST00000540016 GRIN2BQ13224 1484 aa35.76■■■■□ 3.32
MMAB-206ENST00000540016 MAGI1Q96QZ7 1491 aaPredicted RBP35.72■■■■□ 3.31
MMAB-206ENST00000540016 CHMP7Q8WUX9 453 aaPredicted RBP35.7■■■■□ 3.31
MMAB-206ENST00000540016 ABCA10Q8WWZ4 1543 aa35.68■■■■□ 3.3
MMAB-206ENST00000540016 GAPVD1Q14C86 1478 aa35.68■■■■□ 3.3
MMAB-206ENST00000540016 WRNQ14191 1432 aaPredicted RBP eCLIP35.63■■■■□ 3.29
MMAB-206ENST00000540016 SYNJ2O15056 1496 aa35.6■■■■□ 3.29
MMAB-206ENST00000540016 CYB5RLQ6IPT4 315 aa35.59■■■■□ 3.29
MMAB-206ENST00000540016 TOP2BQ02880 1626 aa35.57■■■■□ 3.28
MMAB-206ENST00000540016 ABCA5Q8WWZ7 1642 aa35.55■■■■□ 3.28
MMAB-206ENST00000540016 PBRM1Q86U86 1689 aa35.54■■■■□ 3.28
MMAB-206ENST00000540016 BIVM-ERCC5R4GMW8 1640 aa35.54■■■■□ 3.28
MMAB-206ENST00000540016 SYNJ1O43426 1573 aa35.53■■■■□ 3.28
MMAB-206ENST00000540016 CLASP1Q7Z460 1538 aa35.51■■■■□ 3.27
MMAB-206ENST00000540016 ARAP1Q96P48 1450 aa35.47■■■■□ 3.27
MMAB-206ENST00000540016 GRIN2AQ12879 1464 aa35.29■■■■□ 3.24
MMAB-206ENST00000540016 ADAMTS12P58397 1594 aa35.26■■■■□ 3.24
MMAB-206ENST00000540016 FHAD1B1AJZ9 1412 aa35.24■■■■□ 3.23
MMAB-206ENST00000540016 ERICH3Q5RHP9 1530 aa35.23■■■■□ 3.23
MMAB-206ENST00000540016 NUP160Q12769 1436 aa35.17■■■■□ 3.22
MMAB-206ENST00000540016 CEP170Q5SW79 1584 aa35.12■■■■□ 3.21
MMAB-206ENST00000540016 TRHP20396 242 aaPredicted RBP35.07■■■■□ 3.2
MMAB-206ENST00000540016 ERCC6L2Q5T890 1561 aa34.99■■■■□ 3.19
MMAB-206ENST00000540016 KIF27Q86VH2 1401 aa34.93■■■■□ 3.18
MMAB-206ENST00000540016 IGF1RP08069 1367 aa34.93■■■■□ 3.18
MMAB-206ENST00000540016 SHROOM2Q13796 1616 aa34.92■■■■□ 3.18
MMAB-206ENST00000540016 JPH4Q96JJ6 628 aa34.88■■■■□ 3.17
MMAB-206ENST00000540016 PRG4Q92954 1404 aaPredicted RBP34.82■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms