Protein–RNA interactions for Protein: P40318

SSM4, ERAD-associated E3 ubiquitin-protein ligase DOA10, yeastyeast

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSM4P40318 KEI1YDR367W 666 nt3.44□□□□□ -1.86
SSM4P40318 PEA2YER149C 1263 nt3.44□□□□□ -1.86
SSM4P40318 YGR226CYGR226C 210 nt3.44□□□□□ -1.86
SSM4P40318 PCL5YHR071W 690 nt3.44□□□□□ -1.86
SSM4P40318 YLL044WYLL044W 447 nt3.44□□□□□ -1.86
SSM4P40318 REC102YLR329W 795 nt3.44□□□□□ -1.86
SSM4P40318 GIS4YML006C 2325 nt3.44□□□□□ -1.86
SSM4P40318 OST6YML019W 999 nt3.44□□□□□ -1.86
SSM4P40318 ADI1YMR009W 540 nt3.44□□□□□ -1.86
SSM4P40318 PAI3YMR174C 207 nt3.44□□□□□ -1.86
SSM4P40318 SQS1YNL224C 2304 nt3.44□□□□□ -1.86
SSM4P40318 AIM4YBR194W 372 nt3.44□□□□□ -1.86
SSM4P40318 TAF2YCR042C 4224 nt3.43□□□□□ -1.86
SSM4P40318 MRD1YPR112C 2664 nt3.43□□□□□ -1.86
SSM4P40318 SLF1YDR515W 1344 nt3.43□□□□□ -1.86
SSM4P40318 EFG1YGR271C-A 702 nt3.43□□□□□ -1.86
SSM4P40318 YJL169WYJL169W 369 nt3.43□□□□□ -1.86
SSM4P40318 DNF1YER166W 4716 nt3.42□□□□□ -1.86
SSM4P40318 RPL11BYGR085C 525 nt3.42□□□□□ -1.86
SSM4P40318 ENV10YLR065C 546 nt3.42□□□□□ -1.86
SSM4P40318 RPL16BYNL069C 597 nt3.42□□□□□ -1.86
SSM4P40318 YRO2YBR054W 1035 nt3.42□□□□□ -1.86
SSM4P40318 RPL11AYPR102C 525 nt3.42□□□□□ -1.86
SSM4P40318 CUR1YPR158W 759 nt3.42□□□□□ -1.86
SSM4P40318 LCB4YOR171C 1875 nt3.42□□□□□ -1.86
SSM4P40318 YIL082W-AYIL082W-A 4497 nt3.41□□□□□ -1.86
SSM4P40318 SPP382YLR424W 2127 nt3.41□□□□□ -1.86
SSM4P40318 KHA1YJL094C 2622 nt3.41□□□□□ -1.86
SSM4P40318 UBP8YMR223W 1416 nt3.41□□□□□ -1.86
SSM4P40318 NTF2YER009W 378 nt3.41□□□□□ -1.86
SSM4P40318 YKL091CYKL091C 933 nt3.41□□□□□ -1.86
SSM4P40318 MST28YAR033W 705 nt3.41□□□□□ -1.86
SSM4P40318 YCT1YLL055W 1596 nt3.4□□□□□ -1.86
SSM4P40318 STN1YDR082W 1485 nt3.4□□□□□ -1.86
SSM4P40318 GCD10YNL062C 1437 nt3.4□□□□□ -1.87
SSM4P40318 TFC1YBR123C 1950 nt3.4□□□□□ -1.87
SSM4P40318 PBP4YDL053C 558 nt3.4□□□□□ -1.87
SSM4P40318 YDR431WYDR431W 312 nt3.4□□□□□ -1.87
SSM4P40318 SNO3YFL060C 669 nt3.4□□□□□ -1.87
SSM4P40318 SAE2YGL175C 1038 nt3.4□□□□□ -1.87
SSM4P40318 YLR271WYLR271W 825 nt3.4□□□□□ -1.87
SSM4P40318 SNO2YNL334C 669 nt3.4□□□□□ -1.87
SSM4P40318 CSI2YOL007C 1026 nt3.4□□□□□ -1.87
SSM4P40318 YOL029CYOL029C 606 nt3.4□□□□□ -1.87
SSM4P40318 RIM13YMR154C 2184 nt3.4□□□□□ -1.87
SSM4P40318 APL5YPL195W 2799 nt3.4□□□□□ -1.87
SSM4P40318 HOP1YIL072W 1818 nt3.39□□□□□ -1.87
SSM4P40318 SPO71YDR104C 3738 nt3.39□□□□□ -1.87
SSM4P40318 RPL17BYJL177W 555 nt3.39□□□□□ -1.87
SSM4P40318 PRP21YJL203W 843 nt3.39□□□□□ -1.87
SSM4P40318 UNG1YML021C 1080 nt3.39□□□□□ -1.87
SSM4P40318 AIM32YML050W 936 nt3.39□□□□□ -1.87
SSM4P40318 MRPL40YPL173W 894 nt3.39□□□□□ -1.87
SSM4P40318 YPR147CYPR147C 915 nt3.39□□□□□ -1.87
SSM4P40318 IOC3YFR013W 2364 nt3.38□□□□□ -1.87
SSM4P40318 YCR064CYCR064C 411 nt3.38□□□□□ -1.87
SSM4P40318 STE14YDR410C 720 nt3.38□□□□□ -1.87
SSM4P40318 YFL012W-AYFL012W-A 375 nt3.38□□□□□ -1.87
SSM4P40318 MIC19YFR011C 513 nt3.38□□□□□ -1.87
SSM4P40318 RPS21BYJL136C 264 nt3.38□□□□□ -1.87
SSM4P40318 LSM8YJR022W 330 nt3.38□□□□□ -1.87
SSM4P40318 ECM9YKR004C 1134 nt3.38□□□□□ -1.87
SSM4P40318 VPS63YLR261C 327 nt3.38□□□□□ -1.87
SSM4P40318 YMR187CYMR187C 1296 nt3.38□□□□□ -1.87
SSM4P40318 ATG11YPR049C 3537 nt3.38□□□□□ -1.87
SSM4P40318 ASI3YNL008C 2031 nt3.37□□□□□ -1.87
SSM4P40318 YKL075CYKL075C 1353 nt3.37□□□□□ -1.87
SSM4P40318 VHR1YIL056W 1923 nt3.37□□□□□ -1.87
SSM4P40318 EAP1YKL204W 1899 nt3.37□□□□□ -1.87
SSM4P40318 ATG38YLR211C 681 nt3.37□□□□□ -1.87
SSM4P40318 YOR283WYOR283W 693 nt3.37□□□□□ -1.87
SSM4P40318 YPR170CYPR170C 336 nt3.37□□□□□ -1.87
SSM4P40318 SEC66YBR171W 621 nt3.37□□□□□ -1.87
SSM4P40318 NTC20YBR188C 423 nt3.37□□□□□ -1.87
SSM4P40318 CIK1YMR198W 1785 nt3.37□□□□□ -1.87
SSM4P40318 DIA2YOR080W 2199 nt3.36□□□□□ -1.87
SSM4P40318 TMA20YER007C-A 546 nt3.36□□□□□ -1.87
SSM4P40318 MRPL38YKL170W 417 nt3.36□□□□□ -1.87
SSM4P40318 MIX23YBL107C 591 nt3.36□□□□□ -1.87
SSM4P40318 AFT2YPL202C 1251 nt3.36□□□□□ -1.87
SSM4P40318 MSH4YFL003C 2637 nt3.36□□□□□ -1.87
SSM4P40318 PRP8YHR165C 7242 nt3.35□□□□□ -1.87
SSM4P40318 SNA4YDL123W 423 nt3.35□□□□□ -1.87
SSM4P40318 YDL163WYDL163W 303 nt3.35□□□□□ -1.87
SSM4P40318 YDR461C-AYDR461C-A 243 nt3.35□□□□□ -1.87
SSM4P40318 VMA8YEL051W 771 nt3.35□□□□□ -1.87
SSM4P40318 PRP38YGR075C 729 nt3.35□□□□□ -1.87
SSM4P40318 SFT1YKL006C-A 294 nt3.35□□□□□ -1.87
SSM4P40318 YNL235CYNL235C 432 nt3.35□□□□□ -1.87
SSM4P40318 SWD3YBR175W 948 nt3.35□□□□□ -1.87
SSM4P40318 VPS13YLL040C 9435 nt3.34□□□□□ -1.87
SSM4P40318 TOM70YNL121C 1854 nt3.34□□□□□ -1.87
SSM4P40318 AVT2YEL064C 1443 nt3.34□□□□□ -1.87
SSM4P40318 SHS1YDL225W 1656 nt3.34□□□□□ -1.87
SSM4P40318 KIN82YCR091W 2163 nt3.34□□□□□ -1.87
SSM4P40318 DAD1YDR016C 285 nt3.34□□□□□ -1.87
SSM4P40318 OCA6YDR067C 675 nt3.34□□□□□ -1.87
SSM4P40318 VTC1YER072W 390 nt3.34□□□□□ -1.87
SSM4P40318 YAL059C-AYAL059C-A 423 nt3.34□□□□□ -1.87
SSM4P40318 YMR141CYMR141C 309 nt3.34□□□□□ -1.87
Retrieved 100 of 7,029 protein–RNA pairs in 31.3 ms