RNA–Protein interactions for RNA: YDL225W

SHS1, Transcript of Component of the septin ring that is required for cytokinesis, yeastyeast

Gene SHS1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHS1YDL225W FAP1P53971 965 aa10.54□□□□□ -0.72
SHS1YDL225W MTC1P47018 478 aaKnown RBP10.15□□□□□ -0.78
SHS1YDL225W PRY3P47033 881 aa10□□□□□ -0.81
SHS1YDL225W DRS1P32892 752 aaKnown RBP9.91□□□□□ -0.82
SHS1YDL225W YCK3P39962 524 aa9.25□□□□□ -0.93
SHS1YDL225W HAA1Q12753 694 aaKnown RBP9.2□□□□□ -0.94
SHS1YDL225W AAD16Q02895 342 aa8.93□□□□□ -0.98
SHS1YDL225W PRI1P10363 409 aa8.66□□□□□ -1.02
SHS1YDL225W BFR2Q06631 534 aaKnown RBP8.56□□□□□ -1.04
SHS1YDL225W DIP2Q12220 943 aaPredicted RBP8.56□□□□□ -1.04
SHS1YDL225W ISW2Q08773 1120 aa8.44□□□□□ -1.06
SHS1YDL225W BUD31P25337 157 aaPredicted RBP8.41□□□□□ -1.06
SHS1YDL225W AVT3P36062 692 aa8.3□□□□□ -1.08
SHS1YDL225W RPG1P38249 964 aaKnown RBP8.29□□□□□ -1.08
SHS1YDL225W RSE1Q04693 1361 aaKnown RBP8.19□□□□□ -1.1
SHS1YDL225W TSR3Q12094 313 aaKnown RBP8.11□□□□□ -1.11
SHS1YDL225W YGL015CP33199 130 aa8.1□□□□□ -1.11
SHS1YDL225W TFA1P36100 482 aa8.07□□□□□ -1.12
SHS1YDL225W REB1P21538 810 aa7.89□□□□□ -1.15
SHS1YDL225W RPL17AP05740 184 aaKnown RBP7.88□□□□□ -1.15
SHS1YDL225W RPL17BP46990 184 aaKnown RBP7.88□□□□□ -1.15
SHS1YDL225W SIS1P25294 352 aaKnown RBP7.86□□□□□ -1.15
SHS1YDL225W MRPL32P25348 183 aa7.82□□□□□ -1.16
SHS1YDL225W SPT21P35209 758 aa7.44□□□□□ -1.22
SHS1YDL225W UBP9P39967 754 aa7.34□□□□□ -1.23
SHS1YDL225W RIM101P33400 625 aa7.32□□□□□ -1.24
SHS1YDL225W YKR023WP36119 530 aaKnown RBP7.32□□□□□ -1.24
SHS1YDL225W CDC27P38042 758 aa7.24□□□□□ -1.25
SHS1YDL225W HOP09932 586 aa7.22□□□□□ -1.25
SHS1YDL225W TFC8Q12308 588 aa7.2□□□□□ -1.26
SHS1YDL225W YIL055CP40523 627 aaKnown RBP7.16□□□□□ -1.26
SHS1YDL225W DCD1P06773 312 aa7.14□□□□□ -1.27
SHS1YDL225W PTP3P40048 928 aa7.08□□□□□ -1.28
SHS1YDL225W UBP10P53874 792 aaPredicted RBP7.06□□□□□ -1.28
SHS1YDL225W OXP1P28273 1286 aa7.05□□□□□ -1.28
SHS1YDL225W MAP2P38174 421 aaKnown RBP7.04□□□□□ -1.28
SHS1YDL225W YAH1Q12184 172 aaKnown RBP7.01□□□□□ -1.29
SHS1YDL225W BCH2P36122 765 aa6.98□□□□□ -1.29
SHS1YDL225W SCY1P53009 804 aa6.97□□□□□ -1.29
SHS1YDL225W SSP1P38871 571 aa6.95□□□□□ -1.3
SHS1YDL225W RSM7P47150 247 aa6.95□□□□□ -1.3
SHS1YDL225W BBC1P47068 1157 aa6.91□□□□□ -1.3
SHS1YDL225W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.91□□□□□ -1.3not detected
SHS1YDL225W SLX5P32828 619 aaKnown RBP6.9□□□□□ -1.31
SHS1YDL225W TIF4632P39936 914 aaKnown RBP6.88□□□□□ -1.31
SHS1YDL225W YLR271WQ06152 274 aa6.86□□□□□ -1.31
SHS1YDL225W RQC2Q12532 1038 aaKnown RBP6.85□□□□□ -1.31
SHS1YDL225W AI2P03876 854 aa6.84□□□□□ -1.31
SHS1YDL225W EPS1P40557 701 aa6.84□□□□□ -1.31
SHS1YDL225W BDF1P35817 686 aa6.81□□□□□ -1.32
SHS1YDL225W TGL3P40308 642 aa6.81□□□□□ -1.32
SHS1YDL225W MGA2P40578 1113 aa6.71□□□□□ -1.34
SHS1YDL225W DMA1P38823 416 aa6.68□□□□□ -1.34
SHS1YDL225W PSD2P53037 1138 aaKnown RBP6.66□□□□□ -1.34
SHS1YDL225W CST9Q06032 482 aa6.65□□□□□ -1.34
SHS1YDL225W MRM1P25270 412 aa6.61□□□□□ -1.35
SHS1YDL225W YOR238WQ08634 303 aa6.56□□□□□ -1.36
SHS1YDL225W YAP5P40574 245 aa6.55□□□□□ -1.36
SHS1YDL225W YJL171CP46992 396 aa6.55□□□□□ -1.36
SHS1YDL225W YBL029C-AQ3E756 94 aa6.55□□□□□ -1.36
SHS1YDL225W RTG3P38165 486 aa6.54□□□□□ -1.36
SHS1YDL225W RGA2Q06407 1009 aa6.52□□□□□ -1.37
SHS1YDL225W NSR1P27476 414 aaKnown RBP RIP-Chip data6.51□□□□□ -1.37not detected
SHS1YDL225W MST1P07236 462 aa6.45□□□□□ -1.38
SHS1YDL225W GTT3P39996 337 aa6.45□□□□□ -1.38
SHS1YDL225W YMR1P47147 688 aaKnown RBP RIP-Chip data6.45□□□□□ -1.38not detected
SHS1YDL225W RCR1P38212 213 aa6.43□□□□□ -1.38
SHS1YDL225W AIR2Q12476 344 aaKnown RBP6.42□□□□□ -1.38
SHS1YDL225W PIB1Q06651 286 aa6.41□□□□□ -1.38
SHS1YDL225W DBP1P24784 617 aaKnown RBP6.4□□□□□ -1.38
SHS1YDL225W RAM2P29703 316 aa6.4□□□□□ -1.38
SHS1YDL225W VPS29P38759 282 aa6.39□□□□□ -1.39
SHS1YDL225W YFR006WP43590 535 aa6.36□□□□□ -1.39
SHS1YDL225W WSC3Q12215 556 aa6.35□□□□□ -1.39
SHS1YDL225W VNX1P42839 908 aa6.34□□□□□ -1.39
SHS1YDL225W STS1P38637 319 aa6.31□□□□□ -1.4
SHS1YDL225W SPP1Q03012 353 aa6.31□□□□□ -1.4
SHS1YDL225W MAK11P20484 414 aaKnown RBP6.3□□□□□ -1.4
SHS1YDL225W FKH1P40466 484 aa6.3□□□□□ -1.4
SHS1YDL225W SAS10Q12136 610 aaPredicted RBP6.3□□□□□ -1.4
SHS1YDL225W MIF2P35201 549 aa6.29□□□□□ -1.4
SHS1YDL225W SET1P38827 1080 aaKnown RBP6.28□□□□□ -1.4
SHS1YDL225W VMA1P17255 1071 aaKnown RBP6.26□□□□□ -1.41
SHS1YDL225W EAP1P36041 632 aaKnown RBP6.26□□□□□ -1.41
SHS1YDL225W MSB4Q12317 492 aa6.25□□□□□ -1.41
SHS1YDL225W TIF11P38912 153 aaKnown RBP6.23□□□□□ -1.41
SHS1YDL225W SET4P42948 560 aa6.23□□□□□ -1.41
SHS1YDL225W BMT6Q12291 365 aa6.23□□□□□ -1.41
SHS1YDL225W COQ8P27697 501 aa6.22□□□□□ -1.41
SHS1YDL225W ULI1P43604 169 aa6.21□□□□□ -1.42
SHS1YDL225W GYP5Q12344 894 aa6.21□□□□□ -1.42
SHS1YDL225W YOL036WQ08206 761 aa6.2□□□□□ -1.42
SHS1YDL225W SAM3Q08986 587 aa6.2□□□□□ -1.42
SHS1YDL225W ABP1P15891 592 aaKnown RBP6.2□□□□□ -1.42
SHS1YDL225W GRE2Q12068 342 aaKnown RBP6.18□□□□□ -1.42
SHS1YDL225W ATH1P48016 1211 aa6.17□□□□□ -1.42
SHS1YDL225W NOP53Q12080 455 aaKnown RBP6.17□□□□□ -1.42
SHS1YDL225W IFH1P39520 1085 aa6.17□□□□□ -1.42
SHS1YDL225W PTC3P34221 468 aaKnown RBP6.16□□□□□ -1.42
SHS1YDL225W EDS1P38073 919 aa6.16□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 121.5 ms