RNA–Protein interactions for RNA: YLL055W

YCT1, Transcript of High-affinity cysteine-specific transporter, yeast

Gene YCT1, Length 1,596 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCT1	YLL055W	MTC1	P47018	478 aa	Known RBP	11.46	□□□□□ -0.57
YCT1	YLL055W	DRS1	P32892	752 aa	Known RBP	11.32	□□□□□ -0.6
YCT1	YLL055W	DIP2	Q12220	943 aa	Predicted RBP	9.71	□□□□□ -0.86
YCT1	YLL055W	BFR2	Q06631	534 aa	Known RBP	9.7	□□□□□ -0.86
YCT1	YLL055W	FAP1	P53971	965 aa		9.65	□□□□□ -0.86
YCT1	YLL055W	AVT3	P36062	692 aa		9.51	□□□□□ -0.89
YCT1	YLL055W	ISW2	Q08773	1120 aa		9.39	□□□□□ -0.91
YCT1	YLL055W	PRI1	P10363	409 aa		9.33	□□□□□ -0.92
YCT1	YLL055W	RPG1	P38249	964 aa	Known RBP	9.26	□□□□□ -0.93
YCT1	YLL055W	RSE1	Q04693	1361 aa	Known RBP	9.22	□□□□□ -0.93
YCT1	YLL055W	AAD16	Q02895	342 aa		9.2	□□□□□ -0.94
YCT1	YLL055W	PRY3	P47033	881 aa		9.03	□□□□□ -0.96
YCT1	YLL055W	TFA1	P36100	482 aa		8.98	□□□□□ -0.97
YCT1	YLL055W	RPL17A	P05740	184 aa	Known RBP	8.88	□□□□□ -0.99
YCT1	YLL055W	RPL17B	P46990	184 aa	Known RBP	8.88	□□□□□ -0.99
YCT1	YLL055W	TSR3	Q12094	313 aa	Known RBP	8.85	□□□□□ -0.99
YCT1	YLL055W	REB1	P21538	810 aa		8.8	□□□□□ -1
YCT1	YLL055W	SPT21	P35209	758 aa		8.53	□□□□□ -1.04
YCT1	YLL055W	MRPL32	P25348	183 aa		8.52	□□□□□ -1.05
YCT1	YLL055W	YCK3	P39962	524 aa		8.52	□□□□□ -1.05
YCT1	YLL055W	HAA1	Q12753	694 aa	Known RBP	8.52	□□□□□ -1.05
YCT1	YLL055W	RIM101	P33400	625 aa		8.38	□□□□□ -1.07
YCT1	YLL055W	YKR023W	P36119	530 aa	Known RBP	8.3	□□□□□ -1.08
YCT1	YLL055W	CDC27	P38042	758 aa		8.18	□□□□□ -1.1
YCT1	YLL055W	TFC8	Q12308	588 aa		8.14	□□□□□ -1.11
YCT1	YLL055W	HO	P09932	586 aa		8.13	□□□□□ -1.11
YCT1	YLL055W	OXP1	P28273	1286 aa		8.1	□□□□□ -1.11
YCT1	YLL055W	DCD1	P06773	312 aa		8.07	□□□□□ -1.12
YCT1	YLL055W	YIL055C	P40523	627 aa	Known RBP	8.01	□□□□□ -1.13
YCT1	YLL055W	YGL015C	P33199	130 aa		8	□□□□□ -1.13
YCT1	YLL055W	PTP3	P40048	928 aa		7.97	□□□□□ -1.13
YCT1	YLL055W	YAH1	Q12184	172 aa	Known RBP	7.97	□□□□□ -1.13
YCT1	YLL055W	SSP1	P38871	571 aa		7.92	□□□□□ -1.14
YCT1	YLL055W	BCH2	P36122	765 aa		7.89	□□□□□ -1.15
YCT1	YLL055W	RSM7	P47150	247 aa		7.88	□□□□□ -1.15
YCT1	YLL055W	UBP10	P53874	792 aa	Predicted RBP	7.88	□□□□□ -1.15
YCT1	YLL055W	MAP2	P38174	421 aa	Known RBP	7.85	□□□□□ -1.15
YCT1	YLL055W	YLR271W	Q06152	274 aa		7.84	□□□□□ -1.15
YCT1	YLL055W	SCY1	P53009	804 aa		7.82	□□□□□ -1.16
YCT1	YLL055W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	7.82	□□□□□ -1.16	not detected
YCT1	YLL055W	AI2	P03876	854 aa		7.76	□□□□□ -1.17
YCT1	YLL055W	EPS1	P40557	701 aa		7.75	□□□□□ -1.17
YCT1	YLL055W	BBC1	P47068	1157 aa		7.73	□□□□□ -1.17
YCT1	YLL055W	BDF1	P35817	686 aa		7.69	□□□□□ -1.18
YCT1	YLL055W	SLX5	P32828	619 aa	Known RBP	7.68	□□□□□ -1.18
YCT1	YLL055W	MGA2	P40578	1113 aa		7.66	□□□□□ -1.18
YCT1	YLL055W	PSD2	P53037	1138 aa	Known RBP	7.66	□□□□□ -1.18
YCT1	YLL055W	CST9	Q06032	482 aa		7.59	□□□□□ -1.19
YCT1	YLL055W	TIF4632	P39936	914 aa	Known RBP	7.56	□□□□□ -1.2
YCT1	YLL055W	MRM1	P25270	412 aa		7.51	□□□□□ -1.21
YCT1	YLL055W	TGL3	P40308	642 aa		7.51	□□□□□ -1.21
YCT1	YLL055W	RQC2	Q12532	1038 aa	Known RBP	7.41	□□□□□ -1.22
YCT1	YLL055W	RTG3	P38165	486 aa		7.4	□□□□□ -1.22
YCT1	YLL055W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	7.36	□□□□□ -1.23	not detected
YCT1	YLL055W	RCR1	P38212	213 aa		7.35	□□□□□ -1.23
YCT1	YLL055W	VPS29	P38759	282 aa		7.33	□□□□□ -1.24
YCT1	YLL055W	YAP5	P40574	245 aa		7.33	□□□□□ -1.24
YCT1	YLL055W	DMA1	P38823	416 aa		7.32	□□□□□ -1.24
YCT1	YLL055W	RAM2	P29703	316 aa		7.29	□□□□□ -1.24
YCT1	YLL055W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	7.29	□□□□□ -1.24	not detected
YCT1	YLL055W	YOR238W	Q08634	303 aa		7.29	□□□□□ -1.24
YCT1	YLL055W	MST1	P07236	462 aa		7.25	□□□□□ -1.25
YCT1	YLL055W	DBP1	P24784	617 aa	Known RBP	7.24	□□□□□ -1.25
YCT1	YLL055W	STS1	P38637	319 aa		7.22	□□□□□ -1.25
YCT1	YLL055W	YFR006W	P43590	535 aa		7.22	□□□□□ -1.25
YCT1	YLL055W	PIB1	Q06651	286 aa		7.22	□□□□□ -1.25
YCT1	YLL055W	MAK11	P20484	414 aa	Known RBP	7.21	□□□□□ -1.25
YCT1	YLL055W	GTT3	P39996	337 aa		7.15	□□□□□ -1.27
YCT1	YLL055W	VMA1	P17255	1071 aa	Known RBP	7.12	□□□□□ -1.27
YCT1	YLL055W	UBP9	P39967	754 aa		7.12	□□□□□ -1.27
YCT1	YLL055W	COQ8	P27697	501 aa		7.11	□□□□□ -1.27
YCT1	YLL055W	MIF2	P35201	549 aa		7.11	□□□□□ -1.27
YCT1	YLL055W	SET1	P38827	1080 aa	Known RBP	7.1	□□□□□ -1.27
YCT1	YLL055W	EDS1	P38073	919 aa		7.07	□□□□□ -1.28
YCT1	YLL055W	WSC3	Q12215	556 aa		7.06	□□□□□ -1.28
YCT1	YLL055W	SAM3	Q08986	587 aa		7.05	□□□□□ -1.28
YCT1	YLL055W	BUD31	P25337	157 aa	Predicted RBP	7.04	□□□□□ -1.28
YCT1	YLL055W	NOP53	Q12080	455 aa	Known RBP	7.04	□□□□□ -1.28
YCT1	YLL055W	YBL029C-A	Q3E756	94 aa		7.04	□□□□□ -1.28
YCT1	YLL055W	PTC3	P34221	468 aa	Known RBP	7.03	□□□□□ -1.28
YCT1	YLL055W	YOL036W	Q08206	761 aa		7.01	□□□□□ -1.29
YCT1	YLL055W	VNX1	P42839	908 aa		7	□□□□□ -1.29
YCT1	YLL055W	IFH1	P39520	1085 aa		6.99	□□□□□ -1.29
YCT1	YLL055W	MSB4	Q12317	492 aa		6.99	□□□□□ -1.29
YCT1	YLL055W	SET4	P42948	560 aa		6.99	□□□□□ -1.29
YCT1	YLL055W	SAS10	Q12136	610 aa	Predicted RBP	6.99	□□□□□ -1.29
YCT1	YLL055W	GYP5	Q12344	894 aa		6.99	□□□□□ -1.29
YCT1	YLL055W	GRE2	Q12068	342 aa	Known RBP	6.98	□□□□□ -1.29
YCT1	YLL055W	ATH1	P48016	1211 aa		6.96	□□□□□ -1.29
YCT1	YLL055W	YPR148C	Q06523	435 aa		6.96	□□□□□ -1.29
YCT1	YLL055W	SPP1	Q03012	353 aa		6.95	□□□□□ -1.3
YCT1	YLL055W	ABP1	P15891	592 aa	Known RBP	6.95	□□□□□ -1.3
YCT1	YLL055W	GUT1	P32190	709 aa		6.94	□□□□□ -1.3
YCT1	YLL055W	EAP1	P36041	632 aa	Known RBP	6.94	□□□□□ -1.3
YCT1	YLL055W	TIF11	P38912	153 aa	Known RBP	6.94	□□□□□ -1.3
YCT1	YLL055W	VPS70	P47161	811 aa		6.93	□□□□□ -1.3
YCT1	YLL055W	DCW1	P36091	449 aa		6.92	□□□□□ -1.3
YCT1	YLL055W	ULI1	P43604	169 aa		6.91	□□□□□ -1.3
YCT1	YLL055W	HTA1	P04911	132 aa	Known RBP	6.9	□□□□□ -1.31
YCT1	YLL055W	HTA2	P04912	132 aa		6.9	□□□□□ -1.31

Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms