RNA–Protein interactions for RNA: YIL056W

VHR1, Transcript of Transcriptional activator, yeastyeast

Gene VHR1, Length 1,923 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHR1YIL056W MTC1P47018 478 aaKnown RBP10.91□□□□□ -0.66
VHR1YIL056W DRS1P32892 752 aaKnown RBP10.9□□□□□ -0.66
VHR1YIL056W BFR2Q06631 534 aaKnown RBP9.39□□□□□ -0.91
VHR1YIL056W DIP2Q12220 943 aaPredicted RBP9.3□□□□□ -0.92
VHR1YIL056W FAP1P53971 965 aa9.29□□□□□ -0.92
VHR1YIL056W AVT3P36062 692 aa9.04□□□□□ -0.96
VHR1YIL056W ISW2Q08773 1120 aa8.99□□□□□ -0.97
VHR1YIL056W RPG1P38249 964 aaKnown RBP8.86□□□□□ -0.99
VHR1YIL056W RSE1Q04693 1361 aaKnown RBP8.84□□□□□ -0.99
VHR1YIL056W PRI1P10363 409 aa8.83□□□□□ -1
VHR1YIL056W AAD16Q02895 342 aa8.76□□□□□ -1.01
VHR1YIL056W PRY3P47033 881 aa8.66□□□□□ -1.02
VHR1YIL056W TFA1P36100 482 aa8.61□□□□□ -1.03
VHR1YIL056W RPL17AP05740 184 aaKnown RBP8.54□□□□□ -1.04
VHR1YIL056W RPL17BP46990 184 aaKnown RBP8.54□□□□□ -1.04
VHR1YIL056W REB1P21538 810 aa8.5□□□□□ -1.05
VHR1YIL056W TSR3Q12094 313 aaKnown RBP8.46□□□□□ -1.06
VHR1YIL056W MRPL32P25348 183 aa8.17□□□□□ -1.1
VHR1YIL056W HAA1Q12753 694 aaKnown RBP8.11□□□□□ -1.11
VHR1YIL056W SPT21P35209 758 aa8.05□□□□□ -1.12
VHR1YIL056W RIM101P33400 625 aa7.95□□□□□ -1.14
VHR1YIL056W YCK3P39962 524 aa7.94□□□□□ -1.14
VHR1YIL056W YKR023WP36119 530 aaKnown RBP7.86□□□□□ -1.15
VHR1YIL056W HOP09932 586 aa7.79□□□□□ -1.16
VHR1YIL056W YIL055CP40523 627 aaKnown RBP7.76□□□□□ -1.17
VHR1YIL056W CDC27P38042 758 aa7.75□□□□□ -1.17
VHR1YIL056W PTP3P40048 928 aa7.74□□□□□ -1.17
VHR1YIL056W DCD1P06773 312 aa7.72□□□□□ -1.17
VHR1YIL056W YAH1Q12184 172 aaKnown RBP7.72□□□□□ -1.17
VHR1YIL056W TFC8Q12308 588 aa7.72□□□□□ -1.17
VHR1YIL056W OXP1P28273 1286 aa7.7□□□□□ -1.18
VHR1YIL056W YGL015CP33199 130 aa7.62□□□□□ -1.19
VHR1YIL056W SSP1P38871 571 aa7.6□□□□□ -1.19
VHR1YIL056W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.57□□□□□ -1.2not detected
VHR1YIL056W RSM7P47150 247 aa7.55□□□□□ -1.2
VHR1YIL056W BCH2P36122 765 aa7.5□□□□□ -1.21
VHR1YIL056W SCY1P53009 804 aa7.48□□□□□ -1.21
VHR1YIL056W YLR271WQ06152 274 aa7.48□□□□□ -1.21
VHR1YIL056W MAP2P38174 421 aaKnown RBP7.47□□□□□ -1.21
VHR1YIL056W UBP10P53874 792 aaPredicted RBP7.46□□□□□ -1.21
VHR1YIL056W BBC1P47068 1157 aa7.46□□□□□ -1.22
VHR1YIL056W AI2P03876 854 aa7.43□□□□□ -1.22
VHR1YIL056W EPS1P40557 701 aa7.39□□□□□ -1.23
VHR1YIL056W SLX5P32828 619 aaKnown RBP7.35□□□□□ -1.23
VHR1YIL056W MGA2P40578 1113 aa7.34□□□□□ -1.23
VHR1YIL056W RQC2Q12532 1038 aaKnown RBP7.33□□□□□ -1.24
VHR1YIL056W BDF1P35817 686 aa7.32□□□□□ -1.24
VHR1YIL056W PSD2P53037 1138 aaKnown RBP7.26□□□□□ -1.25
VHR1YIL056W TIF4632P39936 914 aaKnown RBP7.25□□□□□ -1.25
VHR1YIL056W CST9Q06032 482 aa7.25□□□□□ -1.25
VHR1YIL056W MRM1P25270 412 aa7.21□□□□□ -1.25
VHR1YIL056W TGL3P40308 642 aa7.12□□□□□ -1.27
VHR1YIL056W DMA1P38823 416 aa7.11□□□□□ -1.27
VHR1YIL056W RTG3P38165 486 aa7.1□□□□□ -1.27
VHR1YIL056W RCR1P38212 213 aa7□□□□□ -1.29
VHR1YIL056W YAP5P40574 245 aa6.99□□□□□ -1.29
VHR1YIL056W YMR1P47147 688 aaKnown RBP RIP-Chip data6.97□□□□□ -1.29not detected
VHR1YIL056W YOR238WQ08634 303 aa6.97□□□□□ -1.29
VHR1YIL056W PIB1Q06651 286 aa6.96□□□□□ -1.3
VHR1YIL056W RAM2P29703 316 aa6.95□□□□□ -1.3
VHR1YIL056W VPS29P38759 282 aa6.94□□□□□ -1.3
VHR1YIL056W YFR006WP43590 535 aa6.94□□□□□ -1.3
VHR1YIL056W DBP1P24784 617 aaKnown RBP6.93□□□□□ -1.3
VHR1YIL056W GTT3P39996 337 aa6.92□□□□□ -1.3
VHR1YIL056W NSR1P27476 414 aaKnown RBP RIP-Chip data6.91□□□□□ -1.3not detected
VHR1YIL056W MAK11P20484 414 aaKnown RBP6.88□□□□□ -1.31
VHR1YIL056W MIF2P35201 549 aa6.88□□□□□ -1.31
VHR1YIL056W STS1P38637 319 aa6.87□□□□□ -1.31
VHR1YIL056W SET1P38827 1080 aaKnown RBP6.84□□□□□ -1.32
VHR1YIL056W UBP9P39967 754 aa6.82□□□□□ -1.32
VHR1YIL056W COQ8P27697 501 aa6.8□□□□□ -1.32
VHR1YIL056W WSC3Q12215 556 aa6.8□□□□□ -1.32
VHR1YIL056W MST1P07236 462 aa6.8□□□□□ -1.32
VHR1YIL056W VMA1P17255 1071 aaKnown RBP6.78□□□□□ -1.32
VHR1YIL056W IFH1P39520 1085 aa6.73□□□□□ -1.33
VHR1YIL056W EDS1P38073 919 aa6.72□□□□□ -1.33
VHR1YIL056W ATH1P48016 1211 aa6.72□□□□□ -1.33
VHR1YIL056W YBL029C-AQ3E756 94 aa6.72□□□□□ -1.33
VHR1YIL056W SET4P42948 560 aa6.71□□□□□ -1.34
VHR1YIL056W PTC3P34221 468 aaKnown RBP6.7□□□□□ -1.34
VHR1YIL056W VPS70P47161 811 aa6.7□□□□□ -1.34
VHR1YIL056W GRE2Q12068 342 aaKnown RBP6.7□□□□□ -1.34
VHR1YIL056W GYP5Q12344 894 aa6.7□□□□□ -1.34
VHR1YIL056W YOL036WQ08206 761 aa6.68□□□□□ -1.34
VHR1YIL056W NOP53Q12080 455 aaKnown RBP6.68□□□□□ -1.34
VHR1YIL056W SPP1Q03012 353 aa6.67□□□□□ -1.34
VHR1YIL056W DCW1P36091 449 aa6.66□□□□□ -1.34
VHR1YIL056W SAM3Q08986 587 aa6.66□□□□□ -1.34
VHR1YIL056W VNX1P42839 908 aa6.64□□□□□ -1.35
VHR1YIL056W MSB4Q12317 492 aa6.64□□□□□ -1.35
VHR1YIL056W SAS10Q12136 610 aaPredicted RBP6.64□□□□□ -1.35
VHR1YIL056W BUD31P25337 157 aaPredicted RBP6.63□□□□□ -1.35
VHR1YIL056W GUT1P32190 709 aa6.63□□□□□ -1.35
VHR1YIL056W EAP1P36041 632 aaKnown RBP6.63□□□□□ -1.35
VHR1YIL056W ABP1P15891 592 aaKnown RBP6.62□□□□□ -1.35
VHR1YIL056W HTA1P04911 132 aaKnown RBP6.62□□□□□ -1.35
VHR1YIL056W HTA2P04912 132 aa6.62□□□□□ -1.35
VHR1YIL056W SPB4P25808 606 aaPredicted RBP6.62□□□□□ -1.35
VHR1YIL056W TIF11P38912 153 aaKnown RBP6.61□□□□□ -1.35
VHR1YIL056W CKB1P43639 278 aa6.61□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms