RNA–Protein interactions for RNA: YDR515W

SLF1, Transcript of RNA binding protein that associates with polysomes, yeastyeast

Gene SLF1, Length 1,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLF1YDR515W MTC1P47018 478 aaKnown RBP13.01□□□□□ -0.33
SLF1YDR515W FAP1P53971 965 aa12.56□□□□□ -0.4
SLF1YDR515W DRS1P32892 752 aaKnown RBP12.09□□□□□ -0.47
SLF1YDR515W PRY3P47033 881 aa11.86□□□□□ -0.51
SLF1YDR515W PRI1P10363 409 aa11.44□□□□□ -0.58
SLF1YDR515W AAD16Q02895 342 aa11.44□□□□□ -0.58
SLF1YDR515W YCK3P39962 524 aa11.34□□□□□ -0.59
SLF1YDR515W HAA1Q12753 694 aaKnown RBP11.06□□□□□ -0.64
SLF1YDR515W ISW2Q08773 1120 aa10.9□□□□□ -0.66
SLF1YDR515W RPG1P38249 964 aaKnown RBP10.88□□□□□ -0.67
SLF1YDR515W TSR3Q12094 313 aaKnown RBP10.78□□□□□ -0.68
SLF1YDR515W DIP2Q12220 943 aaPredicted RBP10.45□□□□□ -0.74
SLF1YDR515W MRPL32P25348 183 aa10.3□□□□□ -0.76
SLF1YDR515W BFR2Q06631 534 aaKnown RBP10.22□□□□□ -0.77
SLF1YDR515W AVT3P36062 692 aa10.13□□□□□ -0.79
SLF1YDR515W RSE1Q04693 1361 aaKnown RBP10.11□□□□□ -0.79
SLF1YDR515W YGL015CP33199 130 aa10.09□□□□□ -0.79
SLF1YDR515W RPL17AP05740 184 aaKnown RBP9.87□□□□□ -0.83
SLF1YDR515W RPL17BP46990 184 aaKnown RBP9.87□□□□□ -0.83
SLF1YDR515W BUD31P25337 157 aaPredicted RBP9.84□□□□□ -0.83
SLF1YDR515W REB1P21538 810 aa9.83□□□□□ -0.84
SLF1YDR515W CDC27P38042 758 aa9.74□□□□□ -0.85
SLF1YDR515W YKR023WP36119 530 aaKnown RBP9.53□□□□□ -0.88
SLF1YDR515W MAP2P38174 421 aaKnown RBP9.49□□□□□ -0.89
SLF1YDR515W UBP10P53874 792 aaPredicted RBP9.46□□□□□ -0.9
SLF1YDR515W SPT21P35209 758 aa9.43□□□□□ -0.9
SLF1YDR515W TFA1P36100 482 aa9.43□□□□□ -0.9
SLF1YDR515W DCD1P06773 312 aa9.31□□□□□ -0.92
SLF1YDR515W HOP09932 586 aa9.31□□□□□ -0.92
SLF1YDR515W TFC8Q12308 588 aa9.29□□□□□ -0.92
SLF1YDR515W SIS1P25294 352 aaKnown RBP9.15□□□□□ -0.94
SLF1YDR515W SCY1P53009 804 aa9.14□□□□□ -0.95
SLF1YDR515W TGL3P40308 642 aa9.07□□□□□ -0.96
SLF1YDR515W SLX5P32828 619 aaKnown RBP9.04□□□□□ -0.96
SLF1YDR515W TIF4632P39936 914 aaKnown RBP9.04□□□□□ -0.96
SLF1YDR515W RIM101P33400 625 aa9.01□□□□□ -0.97
SLF1YDR515W BCH2P36122 765 aa8.97□□□□□ -0.97
SLF1YDR515W UBP9P39967 754 aa8.96□□□□□ -0.98
SLF1YDR515W OXP1P28273 1286 aa8.7□□□□□ -1.02
SLF1YDR515W EPS1P40557 701 aa8.67□□□□□ -1.02
SLF1YDR515W BDF1P35817 686 aa8.66□□□□□ -1.02
SLF1YDR515W YIL055CP40523 627 aaKnown RBP8.66□□□□□ -1.02
SLF1YDR515W MST1P07236 462 aa8.63□□□□□ -1.03
SLF1YDR515W PTP3P40048 928 aa8.62□□□□□ -1.03
SLF1YDR515W YBL029C-AQ3E756 94 aa8.61□□□□□ -1.03
SLF1YDR515W YAH1Q12184 172 aaKnown RBP8.56□□□□□ -1.04
SLF1YDR515W YOR238WQ08634 303 aa8.52□□□□□ -1.05
SLF1YDR515W VNX1P42839 908 aa8.49□□□□□ -1.05
SLF1YDR515W RSM7P47150 247 aa8.48□□□□□ -1.05
SLF1YDR515W NSR1P27476 414 aaKnown RBP RIP-Chip data8.43□□□□□ -1.06not detected
SLF1YDR515W BBC1P47068 1157 aa8.4□□□□□ -1.06
SLF1YDR515W SSP1P38871 571 aa8.39□□□□□ -1.07
SLF1YDR515W AI2P03876 854 aa8.37□□□□□ -1.07
SLF1YDR515W YLR271WQ06152 274 aa8.37□□□□□ -1.07
SLF1YDR515W SPP1Q03012 353 aa8.36□□□□□ -1.07
SLF1YDR515W WSC3Q12215 556 aa8.34□□□□□ -1.07
SLF1YDR515W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.34□□□□□ -1.07not detected
SLF1YDR515W YAP5P40574 245 aa8.33□□□□□ -1.08
SLF1YDR515W AIR2Q12476 344 aaKnown RBP8.32□□□□□ -1.08
SLF1YDR515W FKH1P40466 484 aa8.26□□□□□ -1.09
SLF1YDR515W TIF11P38912 153 aaKnown RBP8.25□□□□□ -1.09
SLF1YDR515W PSD2P53037 1138 aaKnown RBP8.21□□□□□ -1.1
SLF1YDR515W YJL171CP46992 396 aa8.18□□□□□ -1.1
SLF1YDR515W MGA2P40578 1113 aa8.15□□□□□ -1.1
SLF1YDR515W GTT3P39996 337 aa8.14□□□□□ -1.11
SLF1YDR515W IOC2Q12072 812 aa8.13□□□□□ -1.11
SLF1YDR515W LDB19Q12502 818 aa8.13□□□□□ -1.11
SLF1YDR515W MRM1P25270 412 aa8.1□□□□□ -1.11
SLF1YDR515W ULI1P43604 169 aa8.1□□□□□ -1.11
SLF1YDR515W CST9Q06032 482 aa8.1□□□□□ -1.11
SLF1YDR515W PIB1Q06651 286 aa8.1□□□□□ -1.11
SLF1YDR515W BMT6Q12291 365 aa8.03□□□□□ -1.12
SLF1YDR515W RTG3P38165 486 aa7.96□□□□□ -1.14
SLF1YDR515W MSB4Q12317 492 aa7.94□□□□□ -1.14
SLF1YDR515W RTG1P32607 177 aa7.92□□□□□ -1.14
SLF1YDR515W YOL036WQ08206 761 aa7.91□□□□□ -1.14
SLF1YDR515W TRP5P00931 707 aaKnown RBP7.9□□□□□ -1.14
SLF1YDR515W SET4P42948 560 aa7.9□□□□□ -1.14
SLF1YDR515W EAP1P36041 632 aaKnown RBP7.89□□□□□ -1.15
SLF1YDR515W VPS29P38759 282 aa7.88□□□□□ -1.15
SLF1YDR515W YMR1P47147 688 aaKnown RBP RIP-Chip data7.88□□□□□ -1.15not detected
SLF1YDR515W NCR1Q12200 1170 aa7.87□□□□□ -1.15
SLF1YDR515W RCR1P38212 213 aa7.86□□□□□ -1.15
SLF1YDR515W DBP1P24784 617 aaKnown RBP7.83□□□□□ -1.16
SLF1YDR515W YFR006WP43590 535 aa7.82□□□□□ -1.16
SLF1YDR515W YNL035CP53962 389 aaKnown RBP7.81□□□□□ -1.16
SLF1YDR515W SEC61P32915 480 aa7.79□□□□□ -1.16
SLF1YDR515W VMA1P17255 1071 aaKnown RBP7.78□□□□□ -1.16
SLF1YDR515W STS1P38637 319 aa7.78□□□□□ -1.16
SLF1YDR515W SAM3Q08986 587 aa7.77□□□□□ -1.17
SLF1YDR515W RAM2P29703 316 aa7.75□□□□□ -1.17
SLF1YDR515W DAN4P47179 1161 aa7.72□□□□□ -1.17
SLF1YDR515W MAK11P20484 414 aaKnown RBP7.69□□□□□ -1.18
SLF1YDR515W SAP30P38429 201 aa7.68□□□□□ -1.18
SLF1YDR515W TFG1P41895 735 aaPredicted RBP7.64□□□□□ -1.19
SLF1YDR515W BCK2P33306 851 aa7.63□□□□□ -1.19
SLF1YDR515W MIF2P35201 549 aa7.63□□□□□ -1.19
SLF1YDR515W RGA2Q06407 1009 aa7.63□□□□□ -1.19
SLF1YDR515W DMA1P38823 416 aa7.62□□□□□ -1.19
SLF1YDR515W JIP4Q03361 876 aa7.62□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 66.9 ms