Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM56-RWDD3S4R434 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TMEM56-RWDD3S4R434 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TMEM56-RWDD3S4R434 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.99■□□□□ 0.31
TMEM56-RWDD3S4R434 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC16.99■□□□□ 0.31
TMEM56-RWDD3S4R434 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.99■□□□□ 0.31
TMEM56-RWDD3S4R434 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TMEM56-RWDD3S4R434 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC16.99■□□□□ 0.31
TMEM56-RWDD3S4R434 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC16.99■□□□□ 0.31
TMEM56-RWDD3S4R434 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TMEM56-RWDD3S4R434 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM56-RWDD3S4R434 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM56-RWDD3S4R434 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM56-RWDD3S4R434 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.99■□□□□ 0.31
TMEM56-RWDD3S4R434 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM56-RWDD3S4R434 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM56-RWDD3S4R434 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.99■□□□□ 0.31
TMEM56-RWDD3S4R434 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.98■□□□□ 0.31
TMEM56-RWDD3S4R434 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM56-RWDD3S4R434 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM56-RWDD3S4R434 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC16.98■□□□□ 0.31
TMEM56-RWDD3S4R434 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM56-RWDD3S4R434 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM56-RWDD3S4R434 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM56-RWDD3S4R434 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM56-RWDD3S4R434 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM56-RWDD3S4R434 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.98■□□□□ 0.31
TMEM56-RWDD3S4R434 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM56-RWDD3S4R434 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM56-RWDD3S4R434 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM56-RWDD3S4R434 PTCHD3P2-201ENST00000424937 1205 ntBASIC16.98■□□□□ 0.31
TMEM56-RWDD3S4R434 AC136469.2-201ENST00000623944 1028 ntBASIC16.98■□□□□ 0.31
TMEM56-RWDD3S4R434 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM56-RWDD3S4R434 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM56-RWDD3S4R434 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM56-RWDD3S4R434 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM56-RWDD3S4R434 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM56-RWDD3S4R434 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM56-RWDD3S4R434 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC16.98■□□□□ 0.31
TMEM56-RWDD3S4R434 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM56-RWDD3S4R434 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC16.97■□□□□ 0.31
TMEM56-RWDD3S4R434 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
TMEM56-RWDD3S4R434 SLC47A1P1-202ENST00000449666 945 ntBASIC16.97■□□□□ 0.31
TMEM56-RWDD3S4R434 RARRES2P1-201ENST00000474487 481 ntBASIC16.97■□□□□ 0.31
TMEM56-RWDD3S4R434 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
TMEM56-RWDD3S4R434 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC16.97■□□□□ 0.31
TMEM56-RWDD3S4R434 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.97■□□□□ 0.31
TMEM56-RWDD3S4R434 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM56-RWDD3S4R434 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC16.97■□□□□ 0.31
TMEM56-RWDD3S4R434 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TMEM56-RWDD3S4R434 FP700111.2-201ENST00000619190 1892 ntBASIC16.97■□□□□ 0.31
TMEM56-RWDD3S4R434 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM56-RWDD3S4R434 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC16.96■□□□□ 0.31
TMEM56-RWDD3S4R434 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM56-RWDD3S4R434 AC099778.1-201ENST00000568593 1911 ntBASIC16.96■□□□□ 0.31
TMEM56-RWDD3S4R434 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM56-RWDD3S4R434 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM56-RWDD3S4R434 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM56-RWDD3S4R434 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.96■□□□□ 0.31
TMEM56-RWDD3S4R434 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM56-RWDD3S4R434 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM56-RWDD3S4R434 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM56-RWDD3S4R434 SMUG1P1-201ENST00000590640 811 ntBASIC16.96■□□□□ 0.31
TMEM56-RWDD3S4R434 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC16.96■□□□□ 0.31
TMEM56-RWDD3S4R434 SYT6-210ENST00000641643 1587 ntBASIC16.96■□□□□ 0.31
TMEM56-RWDD3S4R434 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM56-RWDD3S4R434 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM56-RWDD3S4R434 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM56-RWDD3S4R434 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.96■□□□□ 0.3
TMEM56-RWDD3S4R434 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TMEM56-RWDD3S4R434 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TMEM56-RWDD3S4R434 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
TMEM56-RWDD3S4R434 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TMEM56-RWDD3S4R434 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.95■□□□□ 0.3
TMEM56-RWDD3S4R434 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM56-RWDD3S4R434 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.95■□□□□ 0.3
TMEM56-RWDD3S4R434 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM56-RWDD3S4R434 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC16.95■□□□□ 0.3
TMEM56-RWDD3S4R434 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM56-RWDD3S4R434 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM56-RWDD3S4R434 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM56-RWDD3S4R434 SERBP1P1-201ENST00000396021 1160 ntBASIC16.95■□□□□ 0.3
TMEM56-RWDD3S4R434 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC16.95■□□□□ 0.3
TMEM56-RWDD3S4R434 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC16.95■□□□□ 0.3
TMEM56-RWDD3S4R434 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC16.95■□□□□ 0.3
TMEM56-RWDD3S4R434 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC16.95■□□□□ 0.3
TMEM56-RWDD3S4R434 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TMEM56-RWDD3S4R434 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.95■□□□□ 0.3
TMEM56-RWDD3S4R434 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM56-RWDD3S4R434 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM56-RWDD3S4R434 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TMEM56-RWDD3S4R434 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM56-RWDD3S4R434 AC112907.3-201ENST00000577781 2400 ntBASIC16.95■□□□□ 0.3
TMEM56-RWDD3S4R434 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM56-RWDD3S4R434 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM56-RWDD3S4R434 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TMEM56-RWDD3S4R434 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
TMEM56-RWDD3S4R434 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.94■□□□□ 0.3
TMEM56-RWDD3S4R434 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM56-RWDD3S4R434 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms