Protein–RNA interactions for Protein: Q9NST1

PNPLA3, Patatin-like phospholipase domain-containing protein 3, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNPLA3Q9NST1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PNPLA3Q9NST1 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PNPLA3Q9NST1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PNPLA3Q9NST1 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PNPLA3Q9NST1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
PNPLA3Q9NST1 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.84■□□□□ 0.77
PNPLA3Q9NST1 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.84■□□□□ 0.77
PNPLA3Q9NST1 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
PNPLA3Q9NST1 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PNPLA3Q9NST1 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PNPLA3Q9NST1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.84■□□□□ 0.77
PNPLA3Q9NST1 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PNPLA3Q9NST1 AP005435.1-201ENST00000529293 1178 ntBASIC19.84■□□□□ 0.77
PNPLA3Q9NST1 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PNPLA3Q9NST1 OXCT2P1-201ENST00000447263 1535 ntBASIC19.84■□□□□ 0.77
PNPLA3Q9NST1 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.84■□□□□ 0.77
PNPLA3Q9NST1 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PNPLA3Q9NST1 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PNPLA3Q9NST1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.84■□□□□ 0.77
PNPLA3Q9NST1 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.84■□□□□ 0.77
PNPLA3Q9NST1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PNPLA3Q9NST1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PNPLA3Q9NST1 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.84■□□□□ 0.77
PNPLA3Q9NST1 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PNPLA3Q9NST1 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PNPLA3Q9NST1 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PNPLA3Q9NST1 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
PNPLA3Q9NST1 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
PNPLA3Q9NST1 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PNPLA3Q9NST1 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
PNPLA3Q9NST1 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
PNPLA3Q9NST1 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PNPLA3Q9NST1 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.83■□□□□ 0.77
PNPLA3Q9NST1 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.77
PNPLA3Q9NST1 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PNPLA3Q9NST1 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PNPLA3Q9NST1 KRT18P5-201ENST00000436075 1291 ntBASIC19.83■□□□□ 0.77
PNPLA3Q9NST1 AC123595.1-201ENST00000440769 1046 ntBASIC19.83■□□□□ 0.77
PNPLA3Q9NST1 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.83■□□□□ 0.77
PNPLA3Q9NST1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.83■□□□□ 0.77
PNPLA3Q9NST1 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PNPLA3Q9NST1 DUX4L2-201ENST00000561772 1275 ntBASIC19.83■□□□□ 0.77
PNPLA3Q9NST1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.83■□□□□ 0.77
PNPLA3Q9NST1 DUX4L6-201ENST00000626483 1275 ntBASIC19.83■□□□□ 0.77
PNPLA3Q9NST1 DUX4L1-201ENST00000627662 1275 ntBASIC19.83■□□□□ 0.77
PNPLA3Q9NST1 DUX4L8-201ENST00000629013 1275 ntBASIC19.83■□□□□ 0.77
PNPLA3Q9NST1 DUX4L3-201ENST00000630187 1275 ntBASIC19.83■□□□□ 0.77
PNPLA3Q9NST1 DUX4L7-201ENST00000630678 1275 ntBASIC19.83■□□□□ 0.77
PNPLA3Q9NST1 DUX4L5-201ENST00000630834 1275 ntBASIC19.83■□□□□ 0.77
PNPLA3Q9NST1 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
PNPLA3Q9NST1 GABARAPL3-202ENST00000624044 1851 ntBASIC19.83■□□□□ 0.76
PNPLA3Q9NST1 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PNPLA3Q9NST1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.83■□□□□ 0.76
PNPLA3Q9NST1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PNPLA3Q9NST1 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.82■□□□□ 0.76
PNPLA3Q9NST1 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PNPLA3Q9NST1 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PNPLA3Q9NST1 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.82■□□□□ 0.76
PNPLA3Q9NST1 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PNPLA3Q9NST1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.82■□□□□ 0.76
PNPLA3Q9NST1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PNPLA3Q9NST1 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.82■□□□□ 0.76
PNPLA3Q9NST1 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PNPLA3Q9NST1 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.82■□□□□ 0.76
PNPLA3Q9NST1 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
PNPLA3Q9NST1 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PNPLA3Q9NST1 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PNPLA3Q9NST1 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.82■□□□□ 0.76
PNPLA3Q9NST1 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PNPLA3Q9NST1 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PNPLA3Q9NST1 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.81■□□□□ 0.76
PNPLA3Q9NST1 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
PNPLA3Q9NST1 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PNPLA3Q9NST1 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PNPLA3Q9NST1 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.81■□□□□ 0.76
PNPLA3Q9NST1 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PNPLA3Q9NST1 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PNPLA3Q9NST1 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.81■□□□□ 0.76
PNPLA3Q9NST1 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
PNPLA3Q9NST1 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
PNPLA3Q9NST1 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PNPLA3Q9NST1 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.81■□□□□ 0.76
PNPLA3Q9NST1 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PNPLA3Q9NST1 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PNPLA3Q9NST1 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.81■□□□□ 0.76
PNPLA3Q9NST1 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
PNPLA3Q9NST1 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PNPLA3Q9NST1 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PNPLA3Q9NST1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PNPLA3Q9NST1 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
PNPLA3Q9NST1 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PNPLA3Q9NST1 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PNPLA3Q9NST1 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.8■□□□□ 0.76
PNPLA3Q9NST1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PNPLA3Q9NST1 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
PNPLA3Q9NST1 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
PNPLA3Q9NST1 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PNPLA3Q9NST1 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PNPLA3Q9NST1 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PNPLA3Q9NST1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms