RNA–Protein interactions for RNA: ENST00000328697.10

CCDC34-202, Transcript of coiled-coil domain containing 34, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC34, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC34-202ENST00000328697 NISCHQ9Y2I1 1504 aa40.06■■■■■ 4
CCDC34-202ENST00000328697 CCDC180Q9P1Z9 1646 aa34.99■■■■□ 3.19
CCDC34-202ENST00000328697 ABCC9O60706 1549 aa33.73■■■□□ 2.99
CCDC34-202ENST00000328697 SHROOM4Q9ULL8 1493 aa33.54■■■□□ 2.96
CCDC34-202ENST00000328697 ZCCHC6Q5VYS8 1495 aaKnown RBP33.54■■■□□ 2.96
CCDC34-202ENST00000328697 DCAF8L2P0C7V8 631 aa33.46■■■□□ 2.95
CCDC34-202ENST00000328697 SUPT5HO00267 1087 aaKnown RBP33.12■■■□□ 2.89
CCDC34-202ENST00000328697 DCAF1Q9Y4B6 1507 aa33.01■■■□□ 2.88
CCDC34-202ENST00000328697 MYO15BQ96JP2 1530 aa32.77■■■□□ 2.84
CCDC34-202ENST00000328697 NACADO15069 1562 aa32.76■■■□□ 2.83
CCDC34-202ENST00000328697 CHIC1Q5VXU3 224 aa32.62■■■□□ 2.81
CCDC34-202ENST00000328697 RB1CC1Q8TDY2 1594 aa32.6■■■□□ 2.81
CCDC34-202ENST00000328697 HRCP23327 699 aa32.5■■■□□ 2.79
CCDC34-202ENST00000328697 SCRIBQ14160 1630 aa32.29■■■□□ 2.76
CCDC34-202ENST00000328697 PCGF6Q9BYE7 350 aa31.96■■■□□ 2.71
CCDC34-202ENST00000328697 UNC13AQ9UPW8 1703 aa31.91■■■□□ 2.7
CCDC34-202ENST00000328697 PABPN1Q86U42 306 aaKnown RBP eCLIP31.81■■■□□ 2.68
CCDC34-202ENST00000328697 BICRAQ9NZM4 1560 aa31.68■■■□□ 2.66
CCDC34-202ENST00000328697 LOC105371045A0A1W2PR82 267 aa31.49■■■□□ 2.63
CCDC34-202ENST00000328697 PPARGC1BQ86YN6 1023 aaKnown RBP31.48■■■□□ 2.63
CCDC34-202ENST00000328697 TRIM26Q12899 539 aaPredicted RBP31.43■■■□□ 2.62
CCDC34-202ENST00000328697 RSF1Q96T23 1441 aaPredicted RBP31.28■■■□□ 2.6
CCDC34-202ENST00000328697 CECR2Q9BXF3 1484 aa31.26■■■□□ 2.59
CCDC34-202ENST00000328697 ZEB1P37275 1124 aaPredicted RBP31.09■■■□□ 2.57
CCDC34-202ENST00000328697 MROH2BQ7Z745 1585 aa30.99■■■□□ 2.55
CCDC34-202ENST00000328697 TRIM41Q8WV44 630 aa30.94■■■□□ 2.54
CCDC34-202ENST00000328697 BAZ1AQ9NRL2 1556 aaPredicted RBP30.93■■■□□ 2.54
CCDC34-202ENST00000328697 SMARCA4P51532 1647 aa30.85■■■□□ 2.53
CCDC34-202ENST00000328697 EIF4G1Q04637 1599 aaKnown RBP30.76■■■□□ 2.51
CCDC34-202ENST00000328697 WIZO95785 1651 aa30.69■■■□□ 2.5
CCDC34-202ENST00000328697 FAM9AQ8IZU1 332 aaPredicted RBP30.52■■■□□ 2.48
CCDC34-202ENST00000328697 ATAD2BQ9ULI0 1458 aa30.52■■■□□ 2.48
CCDC34-202ENST00000328697 PEG3Q9GZU2 1588 aa30.45■■■□□ 2.46
CCDC34-202ENST00000328697 CC2D2AQ9P2K1 1620 aa30.43■■■□□ 2.46
CCDC34-202ENST00000328697 PELP1Q8IZL8 1130 aaKnown RBP30.41■■■□□ 2.46
CCDC34-202ENST00000328697 SMARCA2P51531 1590 aa30.41■■■□□ 2.46
CCDC34-202ENST00000328697 BAZ1BQ9UIG0 1483 aaKnown RBP30.3■■■□□ 2.44
CCDC34-202ENST00000328697 NCAPD3P42695 1498 aa30.29■■■□□ 2.44
CCDC34-202ENST00000328697 TOP2AP11388 1531 aaKnown RBP30.29■■■□□ 2.44
CCDC34-202ENST00000328697 DNAJC5BQ9UF47 199 aa30.26■■■□□ 2.43
CCDC34-202ENST00000328697 HMGXB3Q12766 1538 aa30.15■■■□□ 2.42
CCDC34-202ENST00000328697 SCAF1Q9H7N4 1312 aaKnown RBP30.14■■■□□ 2.42
CCDC34-202ENST00000328697 EHMT2Q96KQ7 1210 aa30.08■■■□□ 2.41
CCDC34-202ENST00000328697 WRNQ14191 1432 aaPredicted RBP eCLIP30.08■■■□□ 2.41
CCDC34-202ENST00000328697 CCDC88BA6NC98 1476 aa30.07■■■□□ 2.4
CCDC34-202ENST00000328697 CCER1Q8TC90 406 aaPredicted RBP29.92■■■□□ 2.38
CCDC34-202ENST00000328697 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.88■■■□□ 2.37
CCDC34-202ENST00000328697 EEA1Q15075 1411 aa29.85■■■□□ 2.37
CCDC34-202ENST00000328697 ABCC8Q09428 1581 aa29.83■■■□□ 2.37
CCDC34-202ENST00000328697 CEP162Q5TB80 1403 aa29.83■■■□□ 2.37
CCDC34-202ENST00000328697 TNIKQ9UKE5 1360 aa29.82■■■□□ 2.36
CCDC34-202ENST00000328697 ACIN1Q9UKV3 1341 aaKnown RBP29.79■■■□□ 2.36
CCDC34-202ENST00000328697 SOGA1O94964 1423 aa29.64■■■□□ 2.34
CCDC34-202ENST00000328697 DIEXFQ68CQ4 756 aaKnown RBP29.64■■■□□ 2.34
CCDC34-202ENST00000328697 CENPBP07199 599 aaPredicted RBP29.59■■■□□ 2.33
CCDC34-202ENST00000328697 NEUROD1Q13562 356 aa29.59■■■□□ 2.33
CCDC34-202ENST00000328697 GOLGA3Q08378 1498 aa29.57■■■□□ 2.32
CCDC34-202ENST00000328697 CSRNP3Q8WYN3 585 aa29.55■■■□□ 2.32
CCDC34-202ENST00000328697 CADPSQ9ULU8 1353 aa29.53■■■□□ 2.32
CCDC34-202ENST00000328697 CFTRP13569 1480 aa29.52■■■□□ 2.32
CCDC34-202ENST00000328697 NESP48681 1621 aa29.48■■■□□ 2.31
CCDC34-202ENST00000328697 RUSC2Q8N2Y8 1516 aa29.44■■■□□ 2.3
CCDC34-202ENST00000328697 KIF21BO75037 1637 aa29.39■■■□□ 2.3
CCDC34-202ENST00000328697 CEP164Q9UPV0 1460 aa29.36■■■□□ 2.29
CCDC34-202ENST00000328697 ZNF316A6NFI3 1004 aaPredicted RBP29.36■■■□□ 2.29
CCDC34-202ENST00000328697 UBTFP17480 764 aaKnown RBP29.36■■■□□ 2.29
CCDC34-202ENST00000328697 GTF3C3Q9Y5Q9 886 aa29.35■■■□□ 2.29
CCDC34-202ENST00000328697 TTBK1Q5TCY1 1321 aaPredicted RBP29.31■■■□□ 2.28
CCDC34-202ENST00000328697 LAMC3Q9Y6N6 1575 aa29.28■■■□□ 2.28
CCDC34-202ENST00000328697 SYNJ1O43426 1573 aa29.21■■■□□ 2.27
CCDC34-202ENST00000328697 FANCD2Q9BXW9 1451 aa29.2■■■□□ 2.26
CCDC34-202ENST00000328697 CLIP1P30622 1438 aa29.17■■■□□ 2.26
CCDC34-202ENST00000328697 VPS8Q8N3P4 1428 aa29.17■■■□□ 2.26
CCDC34-202ENST00000328697 PRDM2Q13029 1718 aa29.17■■■□□ 2.26
CCDC34-202ENST00000328697 PDS5BQ9NTI5 1447 aa29.13■■■□□ 2.25
CCDC34-202ENST00000328697 MYT1Q01538 1121 aa29.09■■■□□ 2.25
CCDC34-202ENST00000328697 KIF21AQ7Z4S6 1674 aa29■■■□□ 2.23
CCDC34-202ENST00000328697 CUX1P39880 1505 aa28.98■■■□□ 2.23
CCDC34-202ENST00000328697 RAPGEF2Q9Y4G8 1499 aa28.95■■■□□ 2.22
CCDC34-202ENST00000328697 HNRNPUL2Q1KMD3 747 aaKnown RBP28.94■■■□□ 2.22
CCDC34-202ENST00000328697 ERCC6Q03468 1493 aa28.91■■■□□ 2.22
CCDC34-202ENST00000328697 TOP2BQ02880 1626 aa28.9■■■□□ 2.22
CCDC34-202ENST00000328697 CLSPNQ9HAW4 1339 aa28.9■■■□□ 2.22
CCDC34-202ENST00000328697 APLP2Q06481 763 aa28.89■■■□□ 2.22
CCDC34-202ENST00000328697 MIER1Q8N108 512 aa28.89■■■□□ 2.22
CCDC34-202ENST00000328697 URB2Q14146 1524 aaKnown RBP28.87■■■□□ 2.21
CCDC34-202ENST00000328697 ERICH3Q5RHP9 1530 aa28.85■■■□□ 2.21
CCDC34-202ENST00000328697 BIVM-ERCC5R4GMW8 1640 aa28.83■■■□□ 2.2
CCDC34-202ENST00000328697 TOPBP1Q92547 1522 aa28.82■■■□□ 2.2
CCDC34-202ENST00000328697 DNMBPQ6XZF7 1577 aa28.79■■■□□ 2.2
CCDC34-202ENST00000328697 YTHDC1Q96MU7 727 aaKnown RBP28.79■■■□□ 2.2
CCDC34-202ENST00000328697 MRC2Q9UBG0 1479 aa28.77■■■□□ 2.2
CCDC34-202ENST00000328697 FGD5Q6ZNL6 1462 aa28.73■■■□□ 2.19
CCDC34-202ENST00000328697 PRXQ9BXM0 1461 aa28.73■■■□□ 2.19
CCDC34-202ENST00000328697 ARAP1Q96P48 1450 aa28.68■■■□□ 2.18
CCDC34-202ENST00000328697 DHX57Q6P158 1386 aaKnown RBP28.68■■■□□ 2.18
CCDC34-202ENST00000328697 POLA1P09884 1462 aaPredicted RBP28.67■■■□□ 2.18
CCDC34-202ENST00000328697 RAD54L2Q9Y4B4 1467 aa28.63■■■□□ 2.17
CCDC34-202ENST00000328697 THOC2Q8NI27 1593 aaKnown RBP28.62■■■□□ 2.17
CCDC34-202ENST00000328697 WDR62O43379 1518 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms