Protein–RNA interactions for Protein: P47023

TY4A-J, Transposon Ty4-J Gag polyprotein, yeastyeast

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY4A-JP47023 YAP3YHL009C 993 nt3.9□□□□□ -1.79
TY4A-JP47023 YLR406C-AYLR406C-A 150 nt3.9□□□□□ -1.79
TY4A-JP47023 RIO2YNL207W 1278 nt3.9□□□□□ -1.79
TY4A-JP47023 YPR050CYPR050C 414 nt3.9□□□□□ -1.79
TY4A-JP47023 NCS2YNL119W 1482 nt3.9□□□□□ -1.79
TY4A-JP47023 ICR1ICR1 3199 nt3.9□□□□□ -1.79
TY4A-JP47023 SSF1YHR066W 1362 nt3.89□□□□□ -1.79
TY4A-JP47023 DAL5YJR152W 1632 nt3.89□□□□□ -1.79
TY4A-JP47023 UBP5YER144C 2418 nt3.89□□□□□ -1.79
TY4A-JP47023 AHA1YDR214W 1053 nt3.89□□□□□ -1.79
TY4A-JP47023 SUP56tL(CAA)A 82 nt3.89□□□□□ -1.79
TY4A-JP47023 SUP53tL(CAA)C 82 nt3.89□□□□□ -1.79
TY4A-JP47023 tL(CAA)DtL(CAA)D 82 nt3.89□□□□□ -1.79
TY4A-JP47023 tL(CAA)G1tL(CAA)G1 82 nt3.89□□□□□ -1.79
TY4A-JP47023 SUP54tL(CAA)G2 82 nt3.89□□□□□ -1.79
TY4A-JP47023 tL(CAA)G3tL(CAA)G3 82 nt3.89□□□□□ -1.79
TY4A-JP47023 tL(CAA)KtL(CAA)K 82 nt3.89□□□□□ -1.79
TY4A-JP47023 tL(CAA)LtL(CAA)L 82 nt3.89□□□□□ -1.79
TY4A-JP47023 tL(CAA)MtL(CAA)M 82 nt3.89□□□□□ -1.79
TY4A-JP47023 tL(CAA)NtL(CAA)N 82 nt3.89□□□□□ -1.79
TY4A-JP47023 YPR096CYPR096C 303 nt3.89□□□□□ -1.79
TY4A-JP47023 RPO21YDL140C 5202 nt3.88□□□□□ -1.79
TY4A-JP47023 RED1YLR263W 2484 nt3.88□□□□□ -1.79
TY4A-JP47023 SMC3YJL074C 3693 nt3.88□□□□□ -1.79
TY4A-JP47023 BCH1YMR237W 2175 nt3.88□□□□□ -1.79
TY4A-JP47023 TRX3YCR083W 384 nt3.88□□□□□ -1.79
TY4A-JP47023 RTR2YDR066C 591 nt3.88□□□□□ -1.79
TY4A-JP47023 RSM24YDR175C 960 nt3.88□□□□□ -1.79
TY4A-JP47023 YGL015CYGL015C 393 nt3.88□□□□□ -1.79
TY4A-JP47023 RTS3YGR161C 792 nt3.88□□□□□ -1.79
TY4A-JP47023 MTM1YGR257C 1101 nt3.88□□□□□ -1.79
TY4A-JP47023 MRP49YKL167C 414 nt3.88□□□□□ -1.79
TY4A-JP47023 ARC18YLR370C 537 nt3.88□□□□□ -1.79
TY4A-JP47023 YBR076C-AYBR076C-A 267 nt3.88□□□□□ -1.79
TY4A-JP47023 MUB1YMR100W 1863 nt3.88□□□□□ -1.79
TY4A-JP47023 PAM1YDR251W 2493 nt3.87□□□□□ -1.79
TY4A-JP47023 YKR078WYKR078W 1758 nt3.87□□□□□ -1.79
TY4A-JP47023 KRI1YNL308C 1776 nt3.87□□□□□ -1.79
TY4A-JP47023 SPC19YDR201W 498 nt3.87□□□□□ -1.79
TY4A-JP47023 BCD1YHR040W 1101 nt3.87□□□□□ -1.79
TY4A-JP47023 IGO2YHR132W-A 396 nt3.87□□□□□ -1.79
TY4A-JP47023 YKL044WYKL044W 321 nt3.87□□□□□ -1.79
TY4A-JP47023 ILV5YLR355C 1188 nt3.87□□□□□ -1.79
TY4A-JP47023 RSM19YNR037C 276 nt3.87□□□□□ -1.79
TY4A-JP47023 LEE1YPL054W 906 nt3.87□□□□□ -1.79
TY4A-JP47023 MRPL40YPL173W 894 nt3.87□□□□□ -1.79
TY4A-JP47023 snR54snR54 86 nt3.87□□□□□ -1.79
TY4A-JP47023 SPT6YGR116W 4356 nt3.87□□□□□ -1.79
TY4A-JP47023 TCP1YDR212W 1680 nt3.87□□□□□ -1.79
TY4A-JP47023 CDH1YGL003C 1701 nt3.87□□□□□ -1.79
TY4A-JP47023 YEL1YBL060W 2064 nt3.86□□□□□ -1.79
TY4A-JP47023 TAF2YCR042C 4224 nt3.86□□□□□ -1.79
TY4A-JP47023 BI4Q0120 1917 nt3.86□□□□□ -1.79
TY4A-JP47023 YDR061WYDR061W 1620 nt3.86□□□□□ -1.79
TY4A-JP47023 ZDS1YMR273C 2748 nt3.86□□□□□ -1.79
TY4A-JP47023 OPI6YDL096C 327 nt3.86□□□□□ -1.79
TY4A-JP47023 SMX2YFL017W-A 234 nt3.86□□□□□ -1.79
TY4A-JP47023 YGL152CYGL152C 678 nt3.86□□□□□ -1.79
TY4A-JP47023 YIR036W-AYIR036W-A 402 nt3.86□□□□□ -1.79
TY4A-JP47023 HRI1YLR301W 735 nt3.86□□□□□ -1.79
TY4A-JP47023 SSN8YNL025C 972 nt3.86□□□□□ -1.79
TY4A-JP47023 YBR051WYBR051W 351 nt3.86□□□□□ -1.79
TY4A-JP47023 LTP1YPR073C 486 nt3.86□□□□□ -1.79
TY4A-JP47023 NCR1YPL006W 3513 nt3.86□□□□□ -1.79
TY4A-JP47023 PCK1YKR097W 1650 nt3.86□□□□□ -1.79
TY4A-JP47023 CDC40YDR364C 1368 nt3.86□□□□□ -1.79
TY4A-JP47023 YMR018WYMR018W 1545 nt3.85□□□□□ -1.79
TY4A-JP47023 FAT1YBR041W 2010 nt3.85□□□□□ -1.79
TY4A-JP47023 FLO9YAL063C 3969 nt3.85□□□□□ -1.79
TY4A-JP47023 YKL222CYKL222C 2118 nt3.85□□□□□ -1.79
TY4A-JP47023 XRN1YGL173C 4587 nt3.85□□□□□ -1.79
TY4A-JP47023 BIG1YHR101C 1008 nt3.85□□□□□ -1.79
TY4A-JP47023 YKL156C-AYKL156C-A 117 nt3.85□□□□□ -1.79
TY4A-JP47023 DAD2YKR083C 402 nt3.85□□□□□ -1.79
TY4A-JP47023 CDC123YLR215C 1083 nt3.85□□□□□ -1.79
TY4A-JP47023 DDR48YMR173W 1293 nt3.85□□□□□ -1.79
TY4A-JP47023 SWI1YPL016W 3945 nt3.85□□□□□ -1.79
TY4A-JP47023 MAK21YDR060W 3078 nt3.85□□□□□ -1.79
TY4A-JP47023 ADY4YLR227C 1482 nt3.85□□□□□ -1.79
TY4A-JP47023 RSC1YGR056W 2787 nt3.85□□□□□ -1.79
TY4A-JP47023 PEX5YDR244W 1839 nt3.84□□□□□ -1.79
TY4A-JP47023 YER006C-AYER006C-A 318 nt3.84□□□□□ -1.79
TY4A-JP47023 AIM11YER093C-A 414 nt3.84□□□□□ -1.79
TY4A-JP47023 GET1YGL020C 708 nt3.84□□□□□ -1.79
TY4A-JP47023 HUR1YGL168W 333 nt3.84□□□□□ -1.79
TY4A-JP47023 RPS21BYJL136C 264 nt3.84□□□□□ -1.79
TY4A-JP47023 VPH2YKL119C 648 nt3.84□□□□□ -1.79
TY4A-JP47023 GTT2YLL060C 702 nt3.84□□□□□ -1.79
TY4A-JP47023 YLR076CYLR076C 423 nt3.84□□□□□ -1.79
TY4A-JP47023 NOP15YNL110C 663 nt3.84□□□□□ -1.79
TY4A-JP47023 PFK26YIL107C 2484 nt3.84□□□□□ -1.8
TY4A-JP47023 ELO2YCR034W 1044 nt3.83□□□□□ -1.8
TY4A-JP47023 HIS5YIL116W 1158 nt3.83□□□□□ -1.8
TY4A-JP47023 YIL175WYIL175W 318 nt3.83□□□□□ -1.8
TY4A-JP47023 IRC19YLL033W 693 nt3.83□□□□□ -1.8
TY4A-JP47023 YOR248WYOR248W 303 nt3.83□□□□□ -1.8
TY4A-JP47023 CDC55YGL190C 1581 nt3.83□□□□□ -1.8
TY4A-JP47023 STP2YHR006W 1626 nt3.83□□□□□ -1.8
TY4A-JP47023 ROM1YGR070W 3468 nt3.82□□□□□ -1.8
TY4A-JP47023 FRE8YLR047C 2061 nt3.82□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 28 ms