RNA–Protein interactions for RNA: YNL119W

NCS2, Transcript of Protein required for uridine thiolation of Lys(UUU) and Glu(UUC) tRNAs, yeastyeast

Gene NCS2, Length 1,482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NCS2YNL119W FAP1P53971 965 aa12.02□□□□□ -0.49
NCS2YNL119W MTC1P47018 478 aaKnown RBP11.78□□□□□ -0.52
NCS2YNL119W PRY3P47033 881 aa11.37□□□□□ -0.59
NCS2YNL119W YCK3P39962 524 aa10.78□□□□□ -0.68
NCS2YNL119W AAD16Q02895 342 aa10.74□□□□□ -0.69
NCS2YNL119W PRI1P10363 409 aa10.66□□□□□ -0.7
NCS2YNL119W HAA1Q12753 694 aaKnown RBP10.56□□□□□ -0.72
NCS2YNL119W DRS1P32892 752 aaKnown RBP10.23□□□□□ -0.77
NCS2YNL119W TSR3Q12094 313 aaKnown RBP10.02□□□□□ -0.81
NCS2YNL119W ISW2Q08773 1120 aa10.01□□□□□ -0.81
NCS2YNL119W RPG1P38249 964 aaKnown RBP9.98□□□□□ -0.81
NCS2YNL119W MRPL32P25348 183 aa9.59□□□□□ -0.87
NCS2YNL119W YGL015CP33199 130 aa9.53□□□□□ -0.88
NCS2YNL119W BUD31P25337 157 aaPredicted RBP9.34□□□□□ -0.91
NCS2YNL119W RSE1Q04693 1361 aaKnown RBP9.03□□□□□ -0.96
NCS2YNL119W DIP2Q12220 943 aaPredicted RBP8.99□□□□□ -0.97
NCS2YNL119W CDC27P38042 758 aa8.95□□□□□ -0.98
NCS2YNL119W REB1P21538 810 aa8.89□□□□□ -0.99
NCS2YNL119W RPL17AP05740 184 aaKnown RBP8.86□□□□□ -0.99
NCS2YNL119W RPL17BP46990 184 aaKnown RBP8.86□□□□□ -0.99
NCS2YNL119W UBP10P53874 792 aaPredicted RBP8.8□□□□□ -1
NCS2YNL119W MAP2P38174 421 aaKnown RBP8.79□□□□□ -1
NCS2YNL119W SIS1P25294 352 aaKnown RBP8.74□□□□□ -1.01
NCS2YNL119W BFR2Q06631 534 aaKnown RBP8.74□□□□□ -1.01
NCS2YNL119W AVT3P36062 692 aa8.68□□□□□ -1.02
NCS2YNL119W YKR023WP36119 530 aaKnown RBP8.61□□□□□ -1.03
NCS2YNL119W UBP9P39967 754 aa8.51□□□□□ -1.05
NCS2YNL119W DCD1P06773 312 aa8.45□□□□□ -1.06
NCS2YNL119W HOP09932 586 aa8.43□□□□□ -1.06
NCS2YNL119W TGL3P40308 642 aa8.43□□□□□ -1.06
NCS2YNL119W SPT21P35209 758 aa8.41□□□□□ -1.06
NCS2YNL119W TIF4632P39936 914 aaKnown RBP8.41□□□□□ -1.06
NCS2YNL119W TFC8Q12308 588 aa8.41□□□□□ -1.06
NCS2YNL119W SCY1P53009 804 aa8.38□□□□□ -1.07
NCS2YNL119W SLX5P32828 619 aaKnown RBP8.32□□□□□ -1.08
NCS2YNL119W TFA1P36100 482 aa8.13□□□□□ -1.11
NCS2YNL119W BCH2P36122 765 aa8.09□□□□□ -1.11
NCS2YNL119W YBL029C-AQ3E756 94 aa8.02□□□□□ -1.13
NCS2YNL119W MST1P07236 462 aa7.94□□□□□ -1.14
NCS2YNL119W VNX1P42839 908 aa7.87□□□□□ -1.15
NCS2YNL119W YOR238WQ08634 303 aa7.83□□□□□ -1.16
NCS2YNL119W RIM101P33400 625 aa7.81□□□□□ -1.16
NCS2YNL119W BDF1P35817 686 aa7.8□□□□□ -1.16
NCS2YNL119W EPS1P40557 701 aa7.8□□□□□ -1.16
NCS2YNL119W AIR2Q12476 344 aaKnown RBP7.79□□□□□ -1.16
NCS2YNL119W SPP1Q03012 353 aa7.78□□□□□ -1.16
NCS2YNL119W FKH1P40466 484 aa7.72□□□□□ -1.17
NCS2YNL119W YJL171CP46992 396 aa7.72□□□□□ -1.17
NCS2YNL119W WSC3Q12215 556 aa7.7□□□□□ -1.18
NCS2YNL119W NSR1P27476 414 aaKnown RBP RIP-Chip data7.68□□□□□ -1.18not detected
NCS2YNL119W TIF11P38912 153 aaKnown RBP7.62□□□□□ -1.19
NCS2YNL119W YAP5P40574 245 aa7.59□□□□□ -1.19
NCS2YNL119W OXP1P28273 1286 aa7.54□□□□□ -1.2
NCS2YNL119W BMT6Q12291 365 aa7.53□□□□□ -1.2
NCS2YNL119W LDB19Q12502 818 aa7.52□□□□□ -1.21
NCS2YNL119W IOC2Q12072 812 aa7.47□□□□□ -1.21
NCS2YNL119W GTT3P39996 337 aa7.46□□□□□ -1.22
NCS2YNL119W ULI1P43604 169 aa7.45□□□□□ -1.22
NCS2YNL119W PTP3P40048 928 aa7.41□□□□□ -1.22
NCS2YNL119W BBC1P47068 1157 aa7.37□□□□□ -1.23
NCS2YNL119W YIL055CP40523 627 aaKnown RBP7.35□□□□□ -1.23
NCS2YNL119W AI2P03876 854 aa7.32□□□□□ -1.24
NCS2YNL119W PIB1Q06651 286 aa7.3□□□□□ -1.24
NCS2YNL119W RSM7P47150 247 aa7.28□□□□□ -1.24
NCS2YNL119W RTG1P32607 177 aa7.27□□□□□ -1.25
NCS2YNL119W RGA2Q06407 1009 aa7.24□□□□□ -1.25
NCS2YNL119W NCR1Q12200 1170 aa7.24□□□□□ -1.25
NCS2YNL119W YAH1Q12184 172 aaKnown RBP7.23□□□□□ -1.25
NCS2YNL119W MSB4Q12317 492 aa7.23□□□□□ -1.25
NCS2YNL119W EAP1P36041 632 aaKnown RBP7.21□□□□□ -1.26
NCS2YNL119W TRP5P00931 707 aaKnown RBP7.19□□□□□ -1.26
NCS2YNL119W YLR271WQ06152 274 aa7.17□□□□□ -1.26
NCS2YNL119W YOL036WQ08206 761 aa7.16□□□□□ -1.26
NCS2YNL119W SET4P42948 560 aa7.15□□□□□ -1.27
NCS2YNL119W BCK2P33306 851 aa7.14□□□□□ -1.27
NCS2YNL119W YNL035CP53962 389 aaKnown RBP7.14□□□□□ -1.27
NCS2YNL119W SEC61P32915 480 aa7.13□□□□□ -1.27
NCS2YNL119W SSP1P38871 571 aa7.11□□□□□ -1.27
NCS2YNL119W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.08□□□□□ -1.28not detected
NCS2YNL119W SAP30P38429 201 aa7.04□□□□□ -1.28
NCS2YNL119W PSD2P53037 1138 aaKnown RBP7.04□□□□□ -1.28
NCS2YNL119W CHL1P22516 861 aaPredicted RBP7.01□□□□□ -1.29
NCS2YNL119W MRM1P25270 412 aa6.99□□□□□ -1.29
NCS2YNL119W TFG1P41895 735 aaPredicted RBP6.99□□□□□ -1.29
NCS2YNL119W DAN4P47179 1161 aa6.97□□□□□ -1.29
NCS2YNL119W PRE3P38624 215 aa6.96□□□□□ -1.3
NCS2YNL119W CST9Q06032 482 aa6.95□□□□□ -1.3
NCS2YNL119W YDL129WQ07555 291 aa6.94□□□□□ -1.3
NCS2YNL119W VMA1P17255 1071 aaKnown RBP6.93□□□□□ -1.3
NCS2YNL119W SAM3Q08986 587 aa6.93□□□□□ -1.3
NCS2YNL119W DBP1P24784 617 aaKnown RBP6.92□□□□□ -1.3
NCS2YNL119W RQC2Q12532 1038 aaKnown RBP6.92□□□□□ -1.3
NCS2YNL119W YFR006WP43590 535 aa6.92□□□□□ -1.3
NCS2YNL119W YMR1P47147 688 aaKnown RBP RIP-Chip data6.91□□□□□ -1.3not detected
NCS2YNL119W XDJ1P39102 459 aa6.9□□□□□ -1.31
NCS2YNL119W MGA2P40578 1113 aa6.9□□□□□ -1.31
NCS2YNL119W JIP4Q03361 876 aa6.89□□□□□ -1.31
NCS2YNL119W VPS29P38759 282 aa6.88□□□□□ -1.31
NCS2YNL119W VRP1P37370 817 aa6.85□□□□□ -1.31
NCS2YNL119W STS1P38637 319 aa6.85□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms