RNA–Protein interactions for RNA: YLR263W

RED1, Transcript of Protein component of the synaptonemal complex axial elements, yeastyeast

Gene RED1, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RED1YLR263W FAP1P53971 965 aa9.09□□□□□ -0.95
RED1YLR263W MTC1P47018 478 aaKnown RBP8.77□□□□□ -1.01
RED1YLR263W PRY3P47033 881 aa8.49□□□□□ -1.05
RED1YLR263W AAD16Q02895 342 aa8.04□□□□□ -1.12
RED1YLR263W HAA1Q12753 694 aaKnown RBP7.97□□□□□ -1.13
RED1YLR263W DRS1P32892 752 aaKnown RBP7.89□□□□□ -1.15
RED1YLR263W PRI1P10363 409 aa7.81□□□□□ -1.16
RED1YLR263W ISW2Q08773 1120 aa7.67□□□□□ -1.18
RED1YLR263W RPG1P38249 964 aaKnown RBP7.46□□□□□ -1.22
RED1YLR263W YCK3P39962 524 aa7.44□□□□□ -1.22
RED1YLR263W TSR3Q12094 313 aaKnown RBP7.41□□□□□ -1.22
RED1YLR263W MRPL32P25348 183 aa7.34□□□□□ -1.23
RED1YLR263W YGL015CP33199 130 aa7.22□□□□□ -1.25
RED1YLR263W TFA1P36100 482 aa7.08□□□□□ -1.28
RED1YLR263W BFR2Q06631 534 aaKnown RBP7.05□□□□□ -1.28
RED1YLR263W RSE1Q04693 1361 aaKnown RBP6.93□□□□□ -1.3
RED1YLR263W REB1P21538 810 aa6.89□□□□□ -1.31
RED1YLR263W BUD31P25337 157 aaPredicted RBP6.84□□□□□ -1.32
RED1YLR263W DIP2Q12220 943 aaPredicted RBP6.79□□□□□ -1.32
RED1YLR263W RPL17AP05740 184 aaKnown RBP6.72□□□□□ -1.33
RED1YLR263W RPL17BP46990 184 aaKnown RBP6.72□□□□□ -1.33
RED1YLR263W AVT3P36062 692 aa6.7□□□□□ -1.34
RED1YLR263W SIS1P25294 352 aaKnown RBP6.69□□□□□ -1.34
RED1YLR263W UBP9P39967 754 aa6.64□□□□□ -1.35
RED1YLR263W UBP10P53874 792 aaPredicted RBP6.61□□□□□ -1.35
RED1YLR263W TIF4632P39936 914 aaKnown RBP6.53□□□□□ -1.36
RED1YLR263W CDC27P38042 758 aa6.46□□□□□ -1.38
RED1YLR263W MAP2P38174 421 aaKnown RBP6.46□□□□□ -1.38
RED1YLR263W RQC2Q12532 1038 aaKnown RBP6.36□□□□□ -1.39
RED1YLR263W TGL3P40308 642 aa6.33□□□□□ -1.4
RED1YLR263W SLX5P32828 619 aaKnown RBP6.33□□□□□ -1.4
RED1YLR263W SCY1P53009 804 aa6.27□□□□□ -1.41
RED1YLR263W HOP09932 586 aa6.22□□□□□ -1.41
RED1YLR263W YKR023WP36119 530 aaKnown RBP6.22□□□□□ -1.41
RED1YLR263W TFC8Q12308 588 aa6.18□□□□□ -1.42
RED1YLR263W DCD1P06773 312 aa6.11□□□□□ -1.43
RED1YLR263W SPT21P35209 758 aa6.07□□□□□ -1.44
RED1YLR263W YJL171CP46992 396 aa6.07□□□□□ -1.44
RED1YLR263W DMA1P38823 416 aa6.01□□□□□ -1.45
RED1YLR263W TAF7Q05021 590 aa6.01□□□□□ -1.45
RED1YLR263W YOR238WQ08634 303 aa5.99□□□□□ -1.45
RED1YLR263W SPP1Q03012 353 aa5.94□□□□□ -1.46
RED1YLR263W YBL029C-AQ3E756 94 aa5.93□□□□□ -1.46
RED1YLR263W BCH2P36122 765 aa5.91□□□□□ -1.46
RED1YLR263W GTT3P39996 337 aa5.91□□□□□ -1.46
RED1YLR263W WSC3Q12215 556 aa5.87□□□□□ -1.47
RED1YLR263W VNX1P42839 908 aa5.83□□□□□ -1.48
RED1YLR263W YAP5P40574 245 aa5.81□□□□□ -1.48
RED1YLR263W YIL055CP40523 627 aaKnown RBP5.8□□□□□ -1.48
RED1YLR263W MST1P07236 462 aa5.79□□□□□ -1.48
RED1YLR263W EPS1P40557 701 aa5.79□□□□□ -1.48
RED1YLR263W BBC1P47068 1157 aa5.79□□□□□ -1.48
RED1YLR263W BMT6Q12291 365 aa5.79□□□□□ -1.48
RED1YLR263W TIF11P38912 153 aaKnown RBP5.78□□□□□ -1.48
RED1YLR263W PTP3P40048 928 aa5.77□□□□□ -1.49
RED1YLR263W RIM101P33400 625 aa5.76□□□□□ -1.49
RED1YLR263W LEO1P38439 464 aa5.75□□□□□ -1.49
RED1YLR263W BDF1P35817 686 aa5.73□□□□□ -1.49
RED1YLR263W NSR1P27476 414 aaKnown RBP RIP-Chip data5.72□□□□□ -1.49not detected
RED1YLR263W FKH1P40466 484 aa5.71□□□□□ -1.5
RED1YLR263W AIR2Q12476 344 aaKnown RBP5.7□□□□□ -1.5
RED1YLR263W ULI1P43604 169 aa5.67□□□□□ -1.5
RED1YLR263W TFG1P41895 735 aaPredicted RBP5.66□□□□□ -1.5
RED1YLR263W EAP1P36041 632 aaKnown RBP5.64□□□□□ -1.51
RED1YLR263W LDB19Q12502 818 aa5.64□□□□□ -1.51
RED1YLR263W SSP1P38871 571 aa5.63□□□□□ -1.51
RED1YLR263W SAS10Q12136 610 aaPredicted RBP5.59□□□□□ -1.51
RED1YLR263W OXP1P28273 1286 aa5.57□□□□□ -1.52
RED1YLR263W LEU3P08638 886 aa5.56□□□□□ -1.52
RED1YLR263W MSB4Q12317 492 aa5.55□□□□□ -1.52
RED1YLR263W RSM7P47150 247 aa5.55□□□□□ -1.52
RED1YLR263W NCR1Q12200 1170 aa5.53□□□□□ -1.52
RED1YLR263W AI2P03876 854 aa5.52□□□□□ -1.53
RED1YLR263W RTG1P32607 177 aa5.52□□□□□ -1.53
RED1YLR263W YLR271WQ06152 274 aa5.49□□□□□ -1.53
RED1YLR263W BCK2P33306 851 aa5.46□□□□□ -1.54
RED1YLR263W YNL035CP53962 389 aaKnown RBP5.46□□□□□ -1.54
RED1YLR263W IOC2Q12072 812 aa5.46□□□□□ -1.54
RED1YLR263W YAH1Q12184 172 aaKnown RBP5.46□□□□□ -1.54
RED1YLR263W PIB1Q06651 286 aa5.45□□□□□ -1.54
RED1YLR263W SEC61P32915 480 aa5.44□□□□□ -1.54
RED1YLR263W SET4P42948 560 aa5.41□□□□□ -1.54
RED1YLR263W ARP8Q12386 881 aaKnown RBP RIP-Chip data5.41□□□□□ -1.54not detected
RED1YLR263W ABP1P15891 592 aaKnown RBP5.39□□□□□ -1.55
RED1YLR263W TRP5P00931 707 aaKnown RBP5.38□□□□□ -1.55
RED1YLR263W MGA2P40578 1113 aa5.38□□□□□ -1.55
RED1YLR263W YOL036WQ08206 761 aa5.38□□□□□ -1.55
RED1YLR263W CHL1P22516 861 aaPredicted RBP5.36□□□□□ -1.55
RED1YLR263W CST9Q06032 482 aa5.36□□□□□ -1.55
RED1YLR263W SAP30P38429 201 aa5.36□□□□□ -1.55
RED1YLR263W DMA2P53924 522 aa5.35□□□□□ -1.55
RED1YLR263W JIP4Q03361 876 aa5.32□□□□□ -1.56
RED1YLR263W YDL129WQ07555 291 aa5.31□□□□□ -1.56
RED1YLR263W RPN1P38764 993 aaKnown RBP5.3□□□□□ -1.56
RED1YLR263W PSD2P53037 1138 aaKnown RBP5.3□□□□□ -1.56
RED1YLR263W MRM1P25270 412 aa5.29□□□□□ -1.56
RED1YLR263W PRE3P38624 215 aa5.28□□□□□ -1.56
RED1YLR263W YMR1P47147 688 aaKnown RBP RIP-Chip data5.27□□□□□ -1.57not detected
RED1YLR263W ELP4Q02884 456 aaKnown RBP5.25□□□□□ -1.57
RED1YLR263W XDJ1P39102 459 aa5.24□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 126.1 ms