Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LDB2O43679 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.93■□□□□ 0.94
LDB2O43679 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
LDB2O43679 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LDB2O43679 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LDB2O43679 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.93■□□□□ 0.94
LDB2O43679 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LDB2O43679 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LDB2O43679 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.93■□□□□ 0.94
LDB2O43679 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LDB2O43679 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.92■□□□□ 0.94
LDB2O43679 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.92■□□□□ 0.94
LDB2O43679 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.92■□□□□ 0.94
LDB2O43679 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.92■□□□□ 0.94
LDB2O43679 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LDB2O43679 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LDB2O43679 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LDB2O43679 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.92■□□□□ 0.94
LDB2O43679 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.92■□□□□ 0.94
LDB2O43679 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
LDB2O43679 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LDB2O43679 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LDB2O43679 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LDB2O43679 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.92■□□□□ 0.94
LDB2O43679 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
LDB2O43679 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LDB2O43679 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
LDB2O43679 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LDB2O43679 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LDB2O43679 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
LDB2O43679 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
LDB2O43679 KRT16P2-201ENST00000414673 1423 ntBASIC20.91■□□□□ 0.94
LDB2O43679 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.91■□□□□ 0.94
LDB2O43679 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
LDB2O43679 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LDB2O43679 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.91■□□□□ 0.94
LDB2O43679 SLC7A5P2-201ENST00000553010 536 ntBASIC20.91■□□□□ 0.94
LDB2O43679 NTF6G-201ENST00000591094 616 ntBASIC20.91■□□□□ 0.94
LDB2O43679 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.91■□□□□ 0.94
LDB2O43679 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LDB2O43679 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LDB2O43679 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LDB2O43679 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.9■□□□□ 0.94
LDB2O43679 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
LDB2O43679 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.9■□□□□ 0.94
LDB2O43679 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
LDB2O43679 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LDB2O43679 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.9■□□□□ 0.94
LDB2O43679 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.9■□□□□ 0.94
LDB2O43679 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LDB2O43679 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.9■□□□□ 0.94
LDB2O43679 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LDB2O43679 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
LDB2O43679 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
LDB2O43679 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LDB2O43679 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
LDB2O43679 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
LDB2O43679 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
LDB2O43679 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
LDB2O43679 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
LDB2O43679 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LDB2O43679 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LDB2O43679 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LDB2O43679 KRT19P1-201ENST00000405746 1186 ntBASIC20.89■□□□□ 0.93
LDB2O43679 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.89■□□□□ 0.93
LDB2O43679 KRT18P20-201ENST00000548986 1279 ntBASIC20.89■□□□□ 0.93
LDB2O43679 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
LDB2O43679 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LDB2O43679 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
LDB2O43679 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LDB2O43679 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LDB2O43679 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
LDB2O43679 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LDB2O43679 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.89■□□□□ 0.93
LDB2O43679 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LDB2O43679 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.88■□□□□ 0.93
LDB2O43679 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LDB2O43679 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LDB2O43679 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LDB2O43679 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LDB2O43679 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LDB2O43679 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LDB2O43679 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.88■□□□□ 0.93
LDB2O43679 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LDB2O43679 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LDB2O43679 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LDB2O43679 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LDB2O43679 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LDB2O43679 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LDB2O43679 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LDB2O43679 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
LDB2O43679 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LDB2O43679 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
LDB2O43679 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LDB2O43679 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.87■□□□□ 0.93
LDB2O43679 RARRES2P11-201ENST00000635158 484 ntBASIC20.87■□□□□ 0.93
LDB2O43679 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LDB2O43679 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LDB2O43679 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LDB2O43679 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms