Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHCHD1Q96BP2 AP000974.1-201ENST00000623909 2387 ntBASIC15.28■□□□□ 0.04
CHCHD1Q96BP2 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHCHD1Q96BP2 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHCHD1Q96BP2 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHCHD1Q96BP2 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC15.28■□□□□ 0.04
CHCHD1Q96BP2 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHCHD1Q96BP2 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHCHD1Q96BP2 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC15.27■□□□□ 0.04
CHCHD1Q96BP2 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC15.27■□□□□ 0.04
CHCHD1Q96BP2 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHCHD1Q96BP2 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CHCHD1Q96BP2 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHCHD1Q96BP2 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
CHCHD1Q96BP2 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHCHD1Q96BP2 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CHCHD1Q96BP2 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHCHD1Q96BP2 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHCHD1Q96BP2 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CHCHD1Q96BP2 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CHCHD1Q96BP2 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CHCHD1Q96BP2 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC15.27■□□□□ 0.04
CHCHD1Q96BP2 AC087393.1-201ENST00000582896 145 ntBASIC15.27■□□□□ 0.04
CHCHD1Q96BP2 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHCHD1Q96BP2 CR559946.2-201ENST00000623684 991 ntBASIC15.27■□□□□ 0.04
CHCHD1Q96BP2 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHCHD1Q96BP2 ERF-202ENST00000440177 2032 ntTSL 2 BASIC15.27■□□□□ 0.03
CHCHD1Q96BP2 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.03
CHCHD1Q96BP2 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHCHD1Q96BP2 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CHCHD1Q96BP2 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHCHD1Q96BP2 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC15.27■□□□□ 0.03
CHCHD1Q96BP2 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CHCHD1Q96BP2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHCHD1Q96BP2 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
CHCHD1Q96BP2 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHCHD1Q96BP2 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHCHD1Q96BP2 AL162377.1-201ENST00000618844 1793 ntBASIC15.26■□□□□ 0.03
CHCHD1Q96BP2 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC15.26■□□□□ 0.03
CHCHD1Q96BP2 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHCHD1Q96BP2 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHCHD1Q96BP2 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHCHD1Q96BP2 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHCHD1Q96BP2 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHCHD1Q96BP2 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHCHD1Q96BP2 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHCHD1Q96BP2 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC15.26■□□□□ 0.03
CHCHD1Q96BP2 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHCHD1Q96BP2 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CHCHD1Q96BP2 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC15.26■□□□□ 0.03
CHCHD1Q96BP2 GAK-223ENST00000628912 497 ntTSL 5 BASIC15.26■□□□□ 0.03
CHCHD1Q96BP2 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHCHD1Q96BP2 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHCHD1Q96BP2 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CHCHD1Q96BP2 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHCHD1Q96BP2 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHCHD1Q96BP2 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHCHD1Q96BP2 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC15.25■□□□□ 0.03
CHCHD1Q96BP2 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC15.25■□□□□ 0.03
CHCHD1Q96BP2 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC15.25■□□□□ 0.03
CHCHD1Q96BP2 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHCHD1Q96BP2 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
CHCHD1Q96BP2 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC15.25■□□□□ 0.03
CHCHD1Q96BP2 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHCHD1Q96BP2 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHCHD1Q96BP2 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHCHD1Q96BP2 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHCHD1Q96BP2 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC15.25■□□□□ 0.03
CHCHD1Q96BP2 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHCHD1Q96BP2 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
CHCHD1Q96BP2 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CHCHD1Q96BP2 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHCHD1Q96BP2 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHCHD1Q96BP2 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC15.25■□□□□ 0.03
CHCHD1Q96BP2 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHCHD1Q96BP2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CHCHD1Q96BP2 AC112907.3-201ENST00000577781 2400 ntBASIC15.25■□□□□ 0.03
CHCHD1Q96BP2 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHCHD1Q96BP2 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC15.25■□□□□ 0.03
CHCHD1Q96BP2 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHCHD1Q96BP2 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHCHD1Q96BP2 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHCHD1Q96BP2 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHCHD1Q96BP2 AC004408.2-201ENST00000623613 2777 ntBASIC15.24■□□□□ 0.03
CHCHD1Q96BP2 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC15.24■□□□□ 0.03
CHCHD1Q96BP2 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHCHD1Q96BP2 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHCHD1Q96BP2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CHCHD1Q96BP2 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
CHCHD1Q96BP2 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHCHD1Q96BP2 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHCHD1Q96BP2 PLK5-205ENST00000642079 1969 ntBASIC15.24■□□□□ 0.03
CHCHD1Q96BP2 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
CHCHD1Q96BP2 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
CHCHD1Q96BP2 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHCHD1Q96BP2 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHCHD1Q96BP2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHCHD1Q96BP2 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC15.24■□□□□ 0.03
CHCHD1Q96BP2 DUX4L4-201ENST00000566884 1269 ntBASIC15.24■□□□□ 0.03
CHCHD1Q96BP2 AC018755.3-202ENST00000596210 929 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms