RNA–Protein interactions for RNA: ENST00000383472.8

ARHGAP28-203, Transcript of Rho GTPase activating protein 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGAP28, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP28-203ENST00000383472 NISCHQ9Y2I1 1504 aa38.12■■■■□ 3.69
ARHGAP28-203ENST00000383472 SHROOM4Q9ULL8 1493 aa32.84■■■□□ 2.85
ARHGAP28-203ENST00000383472 SUPT5HO00267 1087 aaKnown RBP32.42■■■□□ 2.78
ARHGAP28-203ENST00000383472 ZCCHC6Q5VYS8 1495 aaKnown RBP32.37■■■□□ 2.77
ARHGAP28-203ENST00000383472 CCDC180Q9P1Z9 1646 aa32.17■■■□□ 2.74
ARHGAP28-203ENST00000383472 MYO15BQ96JP2 1530 aa31.83■■■□□ 2.69
ARHGAP28-203ENST00000383472 CHIC1Q5VXU3 224 aa31.79■■■□□ 2.68
ARHGAP28-203ENST00000383472 HRCP23327 699 aa31.68■■■□□ 2.66
ARHGAP28-203ENST00000383472 DCAF8L2P0C7V8 631 aa31.41■■■□□ 2.62
ARHGAP28-203ENST00000383472 PCGF6Q9BYE7 350 aa31.29■■■□□ 2.6
ARHGAP28-203ENST00000383472 DCAF1Q9Y4B6 1507 aa31.29■■■□□ 2.6
ARHGAP28-203ENST00000383472 PPARGC1BQ86YN6 1023 aaKnown RBP30.91■■■□□ 2.54
ARHGAP28-203ENST00000383472 LOC105371045A0A1W2PR82 267 aa30.86■■■□□ 2.53
ARHGAP28-203ENST00000383472 ABCC9O60706 1549 aa30.64■■■□□ 2.5
ARHGAP28-203ENST00000383472 TRIM26Q12899 539 aaPredicted RBP30.61■■■□□ 2.49
ARHGAP28-203ENST00000383472 RSF1Q96T23 1441 aaPredicted RBP30.37■■■□□ 2.45
ARHGAP28-203ENST00000383472 SCRIBQ14160 1630 aa30.24■■■□□ 2.43
ARHGAP28-203ENST00000383472 TRIM41Q8WV44 630 aa30.17■■■□□ 2.42
ARHGAP28-203ENST00000383472 ZEB1P37275 1124 aaPredicted RBP30.15■■■□□ 2.42
ARHGAP28-203ENST00000383472 RB1CC1Q8TDY2 1594 aa30.13■■■□□ 2.41
ARHGAP28-203ENST00000383472 FAM9AQ8IZU1 332 aaPredicted RBP29.93■■■□□ 2.38
ARHGAP28-203ENST00000383472 CECR2Q9BXF3 1484 aa29.71■■■□□ 2.35
ARHGAP28-203ENST00000383472 MROH2BQ7Z745 1585 aa29.67■■■□□ 2.34
ARHGAP28-203ENST00000383472 EHMT2Q96KQ7 1210 aa29.65■■■□□ 2.34
ARHGAP28-203ENST00000383472 NACADO15069 1562 aa29.63■■■□□ 2.33
ARHGAP28-203ENST00000383472 WIZO95785 1651 aa29.53■■■□□ 2.32
ARHGAP28-203ENST00000383472 SCAF1Q9H7N4 1312 aaKnown RBP29.49■■■□□ 2.31
ARHGAP28-203ENST00000383472 PELP1Q8IZL8 1130 aaKnown RBP29.47■■■□□ 2.31
ARHGAP28-203ENST00000383472 BAZ1AQ9NRL2 1556 aaPredicted RBP29.4■■■□□ 2.3
ARHGAP28-203ENST00000383472 EIF4G1Q04637 1599 aaKnown RBP29.39■■■□□ 2.3
ARHGAP28-203ENST00000383472 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.27■■■□□ 2.28
ARHGAP28-203ENST00000383472 CCER1Q8TC90 406 aaPredicted RBP29.22■■■□□ 2.27
ARHGAP28-203ENST00000383472 WRNQ14191 1432 aaPredicted RBP eCLIP29.12■■■□□ 2.25
ARHGAP28-203ENST00000383472 TOP2AP11388 1531 aaKnown RBP29.08■■■□□ 2.25
ARHGAP28-203ENST00000383472 ABCC8Q09428 1581 aa29.05■■■□□ 2.24
ARHGAP28-203ENST00000383472 CCDC88BA6NC98 1476 aa29.05■■■□□ 2.24
ARHGAP28-203ENST00000383472 ACIN1Q9UKV3 1341 aaKnown RBP29.04■■■□□ 2.24
ARHGAP28-203ENST00000383472 CEP162Q5TB80 1403 aa28.99■■■□□ 2.23
ARHGAP28-203ENST00000383472 NEUROD1Q13562 356 aa28.95■■■□□ 2.22
ARHGAP28-203ENST00000383472 SMARCA2P51531 1590 aa28.94■■■□□ 2.22
ARHGAP28-203ENST00000383472 DIEXFQ68CQ4 756 aaKnown RBP28.94■■■□□ 2.22
ARHGAP28-203ENST00000383472 SMARCA4P51532 1647 aa28.93■■■□□ 2.22
ARHGAP28-203ENST00000383472 TNIKQ9UKE5 1360 aa28.91■■■□□ 2.22
ARHGAP28-203ENST00000383472 SOGA1O94964 1423 aa28.88■■■□□ 2.21
ARHGAP28-203ENST00000383472 TTBK1Q5TCY1 1321 aaPredicted RBP28.85■■■□□ 2.21
ARHGAP28-203ENST00000383472 EEA1Q15075 1411 aa28.82■■■□□ 2.2
ARHGAP28-203ENST00000383472 CENPBP07199 599 aaPredicted RBP28.78■■■□□ 2.2
ARHGAP28-203ENST00000383472 CSRNP3Q8WYN3 585 aa28.74■■■□□ 2.19
ARHGAP28-203ENST00000383472 RUSC2Q8N2Y8 1516 aa28.71■■■□□ 2.19
ARHGAP28-203ENST00000383472 GTF3C3Q9Y5Q9 886 aa28.71■■■□□ 2.19
ARHGAP28-203ENST00000383472 UBTFP17480 764 aaKnown RBP28.66■■■□□ 2.18
ARHGAP28-203ENST00000383472 GOLGA3Q08378 1498 aa28.66■■■□□ 2.18
ARHGAP28-203ENST00000383472 UNC13AQ9UPW8 1703 aa28.62■■■□□ 2.17
ARHGAP28-203ENST00000383472 ZNF316A6NFI3 1004 aaPredicted RBP28.59■■■□□ 2.17
ARHGAP28-203ENST00000383472 CEP164Q9UPV0 1460 aa28.44■■■□□ 2.14
ARHGAP28-203ENST00000383472 KIF21BO75037 1637 aa28.42■■■□□ 2.14
ARHGAP28-203ENST00000383472 PEG3Q9GZU2 1588 aa28.36■■■□□ 2.13
ARHGAP28-203ENST00000383472 SYNJ1O43426 1573 aa28.36■■■□□ 2.13
ARHGAP28-203ENST00000383472 CLIP1P30622 1438 aa28.34■■■□□ 2.13
ARHGAP28-203ENST00000383472 HNRNPUL2Q1KMD3 747 aaKnown RBP28.32■■■□□ 2.12
ARHGAP28-203ENST00000383472 VPS8Q8N3P4 1428 aa28.3■■■□□ 2.12
ARHGAP28-203ENST00000383472 BICRAQ9NZM4 1560 aa28.26■■■□□ 2.12
ARHGAP28-203ENST00000383472 YTHDC1Q96MU7 727 aaKnown RBP28.25■■■□□ 2.11
ARHGAP28-203ENST00000383472 BAZ1BQ9UIG0 1483 aaKnown RBP28.25■■■□□ 2.11
ARHGAP28-203ENST00000383472 MIER1Q8N108 512 aa28.25■■■□□ 2.11
ARHGAP28-203ENST00000383472 PABPN1Q86U42 306 aaKnown RBP eCLIP28.2■■■□□ 2.1
ARHGAP28-203ENST00000383472 RAPGEF2Q9Y4G8 1499 aa28.16■■■□□ 2.1
ARHGAP28-203ENST00000383472 APLP2Q06481 763 aa28.12■■■□□ 2.09
ARHGAP28-203ENST00000383472 MYT1Q01538 1121 aa28.11■■■□□ 2.09
ARHGAP28-203ENST00000383472 ATAD2BQ9ULI0 1458 aa28.07■■■□□ 2.08
ARHGAP28-203ENST00000383472 TOP2BQ02880 1626 aa27.96■■■□□ 2.07
ARHGAP28-203ENST00000383472 CLSPNQ9HAW4 1339 aa27.96■■■□□ 2.07
ARHGAP28-203ENST00000383472 RANGAP1P46060 587 aaPredicted RBP27.94■■■□□ 2.06
ARHGAP28-203ENST00000383472 DHX57Q6P158 1386 aaKnown RBP27.9■■■□□ 2.06
ARHGAP28-203ENST00000383472 ERICH3Q5RHP9 1530 aa27.87■■■□□ 2.05
ARHGAP28-203ENST00000383472 BIVM-ERCC5R4GMW8 1640 aa27.85■■■□□ 2.05
ARHGAP28-203ENST00000383472 ARAP1Q96P48 1450 aa27.85■■■□□ 2.05
ARHGAP28-203ENST00000383472 PRXQ9BXM0 1461 aa27.84■■■□□ 2.05
ARHGAP28-203ENST00000383472 KANK4Q5T7N3 995 aaPredicted RBP27.74■■■□□ 2.03
ARHGAP28-203ENST00000383472 RRBP1Q9P2E9 1410 aaKnown RBP27.72■■■□□ 2.03
ARHGAP28-203ENST00000383472 CUX2O14529 1486 aa27.66■■■□□ 2.02
ARHGAP28-203ENST00000383472 CUX1P39880 1505 aa27.59■■■□□ 2.01
ARHGAP28-203ENST00000383472 KIF27Q86VH2 1401 aa27.57■■■□□ 2
ARHGAP28-203ENST00000383472 SUPT16HQ9Y5B9 1047 aaKnown RBP27.56■■■□□ 2
ARHGAP28-203ENST00000383472 CCNB3Q8WWL7 1395 aa27.56■■■□□ 2
ARHGAP28-203ENST00000383472 ARHGAP35Q9NRY4 1499 aa27.52■■■□□ 2
ARHGAP28-203ENST00000383472 HMGXB3Q12766 1538 aa27.47■■□□□ 1.99
ARHGAP28-203ENST00000383472 NCAPD3P42695 1498 aa27.43■■□□□ 1.98
ARHGAP28-203ENST00000383472 RAB3GAP2Q9H2M9 1393 aa27.37■■□□□ 1.97
ARHGAP28-203ENST00000383472 MAPKBP1O60336 1514 aa27.37■■□□□ 1.97
ARHGAP28-203ENST00000383472 CFTRP13569 1480 aa27.37■■□□□ 1.97
ARHGAP28-203ENST00000383472 ITGAEP38570 1179 aa27.37■■□□□ 1.97
ARHGAP28-203ENST00000383472 MAP3K1Q13233 1512 aa27.32■■□□□ 1.96
ARHGAP28-203ENST00000383472 TIAM1Q13009 1591 aa27.31■■□□□ 1.96
ARHGAP28-203ENST00000383472 KCNH8Q96L42 1107 aa27.24■■□□□ 1.95
ARHGAP28-203ENST00000383472 SETD5Q9C0A6 1442 aa27.24■■□□□ 1.95
ARHGAP28-203ENST00000383472 IGF1RP08069 1367 aa27.24■■□□□ 1.95
ARHGAP28-203ENST00000383472 TSHZ2Q9NRE2 1034 aa27.23■■□□□ 1.95
ARHGAP28-203ENST00000383472 LRRC9Q6ZRR7 1453 aa27.2■■□□□ 1.95
ARHGAP28-203ENST00000383472 PHLDB1Q86UU1 1377 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms