RNA–Protein interactions for RNA: ENST00000518149.5

NKX2-1-203, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX2-1, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-203ENST00000518149 NISCHQ9Y2I1 1504 aa40.03■■■■■ 4
NKX2-1-203ENST00000518149 CCDC180Q9P1Z9 1646 aa34.98■■■■□ 3.19
NKX2-1-203ENST00000518149 ABCC9O60706 1549 aa33.78■■■■□ 3
NKX2-1-203ENST00000518149 ZCCHC6Q5VYS8 1495 aaKnown RBP33.52■■■□□ 2.96
NKX2-1-203ENST00000518149 DCAF8L2P0C7V8 631 aa33.52■■■□□ 2.96
NKX2-1-203ENST00000518149 DCAF1Q9Y4B6 1507 aa32.94■■■□□ 2.86
NKX2-1-203ENST00000518149 NACADO15069 1562 aa32.73■■■□□ 2.83
NKX2-1-203ENST00000518149 MYO15BQ96JP2 1530 aa32.7■■■□□ 2.82
NKX2-1-203ENST00000518149 SHROOM4Q9ULL8 1493 aa32.63■■■□□ 2.81
NKX2-1-203ENST00000518149 RB1CC1Q8TDY2 1594 aa32.6■■■□□ 2.81
NKX2-1-203ENST00000518149 SCRIBQ14160 1630 aa32.34■■■□□ 2.77
NKX2-1-203ENST00000518149 UNC13AQ9UPW8 1703 aa32■■■□□ 2.71
NKX2-1-203ENST00000518149 PABPN1Q86U42 306 aaKnown RBP eCLIP31.86■■■□□ 2.69
NKX2-1-203ENST00000518149 BICRAQ9NZM4 1560 aa31.69■■■□□ 2.66
NKX2-1-203ENST00000518149 HRCP23327 699 aa31.55■■■□□ 2.64
NKX2-1-203ENST00000518149 SUPT5HO00267 1087 aaKnown RBP31.52■■■□□ 2.64
NKX2-1-203ENST00000518149 CECR2Q9BXF3 1484 aa31.27■■■□□ 2.6
NKX2-1-203ENST00000518149 MROH2BQ7Z745 1585 aa30.99■■■□□ 2.55
NKX2-1-203ENST00000518149 RSF1Q96T23 1441 aaPredicted RBP30.94■■■□□ 2.54
NKX2-1-203ENST00000518149 PCGF6Q9BYE7 350 aa30.92■■■□□ 2.54
NKX2-1-203ENST00000518149 BAZ1AQ9NRL2 1556 aaPredicted RBP30.91■■■□□ 2.54
NKX2-1-203ENST00000518149 CHIC1Q5VXU3 224 aa30.89■■■□□ 2.54
NKX2-1-203ENST00000518149 SMARCA4P51532 1647 aa30.87■■■□□ 2.53
NKX2-1-203ENST00000518149 EIF4G1Q04637 1599 aaKnown RBP30.78■■■□□ 2.52
NKX2-1-203ENST00000518149 PPARGC1BQ86YN6 1023 aaKnown RBP30.77■■■□□ 2.52
NKX2-1-203ENST00000518149 WIZO95785 1651 aa30.72■■■□□ 2.51
NKX2-1-203ENST00000518149 ATAD2BQ9ULI0 1458 aa30.5■■■□□ 2.47
NKX2-1-203ENST00000518149 CC2D2AQ9P2K1 1620 aa30.47■■■□□ 2.47
NKX2-1-203ENST00000518149 PEG3Q9GZU2 1588 aa30.42■■■□□ 2.46
NKX2-1-203ENST00000518149 SMARCA2P51531 1590 aa30.39■■■□□ 2.46
NKX2-1-203ENST00000518149 BAZ1BQ9UIG0 1483 aaKnown RBP30.31■■■□□ 2.44
NKX2-1-203ENST00000518149 DNAJC5BQ9UF47 199 aa30.31■■■□□ 2.44
NKX2-1-203ENST00000518149 TOP2AP11388 1531 aaKnown RBP30.27■■■□□ 2.44
NKX2-1-203ENST00000518149 NCAPD3P42695 1498 aa30.26■■■□□ 2.43
NKX2-1-203ENST00000518149 PELP1Q8IZL8 1130 aaKnown RBP30.2■■■□□ 2.43
NKX2-1-203ENST00000518149 HMGXB3Q12766 1538 aa30.14■■■□□ 2.42
NKX2-1-203ENST00000518149 TRIM26Q12899 539 aaPredicted RBP30.08■■■□□ 2.41
NKX2-1-203ENST00000518149 LOC105371045A0A1W2PR82 267 aa30.06■■■□□ 2.4
NKX2-1-203ENST00000518149 CCDC88BA6NC98 1476 aa30.05■■■□□ 2.4
NKX2-1-203ENST00000518149 ZEB1P37275 1124 aaPredicted RBP29.83■■■□□ 2.37
NKX2-1-203ENST00000518149 SCAF1Q9H7N4 1312 aaKnown RBP29.67■■■□□ 2.34
NKX2-1-203ENST00000518149 NESP48681 1621 aa29.53■■■□□ 2.32
NKX2-1-203ENST00000518149 CADPSQ9ULU8 1353 aa29.51■■■□□ 2.31
NKX2-1-203ENST00000518149 CFTRP13569 1480 aa29.49■■■□□ 2.31
NKX2-1-203ENST00000518149 TRIM41Q8WV44 630 aa29.39■■■□□ 2.3
NKX2-1-203ENST00000518149 ABCC8Q09428 1581 aa29.35■■■□□ 2.29
NKX2-1-203ENST00000518149 LAMC3Q9Y6N6 1575 aa29.28■■■□□ 2.28
NKX2-1-203ENST00000518149 PRDM2Q13029 1718 aa29.21■■■□□ 2.27
NKX2-1-203ENST00000518149 FANCD2Q9BXW9 1451 aa29.2■■■□□ 2.27
NKX2-1-203ENST00000518149 FAM9AQ8IZU1 332 aaPredicted RBP29.12■■■□□ 2.25
NKX2-1-203ENST00000518149 WRNQ14191 1432 aaPredicted RBP eCLIP29.12■■■□□ 2.25
NKX2-1-203ENST00000518149 PDS5BQ9NTI5 1447 aa29.12■■■□□ 2.25
NKX2-1-203ENST00000518149 KIF21AQ7Z4S6 1674 aa29.07■■■□□ 2.24
NKX2-1-203ENST00000518149 ACIN1Q9UKV3 1341 aaKnown RBP29.06■■■□□ 2.24
NKX2-1-203ENST00000518149 SYNJ1O43426 1573 aa29.04■■■□□ 2.24
NKX2-1-203ENST00000518149 CEP164Q9UPV0 1460 aa29.04■■■□□ 2.24
NKX2-1-203ENST00000518149 MYT1Q01538 1121 aa29■■■□□ 2.23
NKX2-1-203ENST00000518149 CUX1P39880 1505 aa28.98■■■□□ 2.23
NKX2-1-203ENST00000518149 ERCC6Q03468 1493 aa28.96■■■□□ 2.23
NKX2-1-203ENST00000518149 NEUROD1Q13562 356 aa28.94■■■□□ 2.22
NKX2-1-203ENST00000518149 URB2Q14146 1524 aaKnown RBP28.88■■■□□ 2.21
NKX2-1-203ENST00000518149 TOP2BQ02880 1626 aa28.88■■■□□ 2.21
NKX2-1-203ENST00000518149 EHMT2Q96KQ7 1210 aa28.87■■■□□ 2.21
NKX2-1-203ENST00000518149 TOPBP1Q92547 1522 aa28.82■■■□□ 2.2
NKX2-1-203ENST00000518149 BIVM-ERCC5R4GMW8 1640 aa28.82■■■□□ 2.2
NKX2-1-203ENST00000518149 DNMBPQ6XZF7 1577 aa28.78■■■□□ 2.2
NKX2-1-203ENST00000518149 MRC2Q9UBG0 1479 aa28.77■■■□□ 2.2
NKX2-1-203ENST00000518149 GTF3C3Q9Y5Q9 886 aa28.76■■■□□ 2.2
NKX2-1-203ENST00000518149 CENPBP07199 599 aaPredicted RBP28.76■■■□□ 2.19
NKX2-1-203ENST00000518149 FGD5Q6ZNL6 1462 aa28.75■■■□□ 2.19
NKX2-1-203ENST00000518149 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.72■■■□□ 2.19
NKX2-1-203ENST00000518149 CCER1Q8TC90 406 aaPredicted RBP28.71■■■□□ 2.19
NKX2-1-203ENST00000518149 SOGA1O94964 1423 aa28.71■■■□□ 2.19
NKX2-1-203ENST00000518149 POLA1P09884 1462 aaPredicted RBP28.67■■■□□ 2.18
NKX2-1-203ENST00000518149 DIEXFQ68CQ4 756 aaKnown RBP28.66■■■□□ 2.18
NKX2-1-203ENST00000518149 THOC2Q8NI27 1593 aaKnown RBP28.66■■■□□ 2.18
NKX2-1-203ENST00000518149 RUSC2Q8N2Y8 1516 aa28.66■■■□□ 2.18
NKX2-1-203ENST00000518149 RAD54L2Q9Y4B4 1467 aa28.65■■■□□ 2.18
NKX2-1-203ENST00000518149 WDR62O43379 1518 aa28.62■■■□□ 2.17
NKX2-1-203ENST00000518149 CUX2O14529 1486 aa28.51■■■□□ 2.15
NKX2-1-203ENST00000518149 TDRD9Q8NDG6 1382 aaKnown RBP28.43■■■□□ 2.14
NKX2-1-203ENST00000518149 ABCA10Q8WWZ4 1543 aa28.41■■■□□ 2.14
NKX2-1-203ENST00000518149 TARBP1Q13395 1621 aaKnown RBP28.4■■■□□ 2.14
NKX2-1-203ENST00000518149 KIF27Q86VH2 1401 aa28.39■■■□□ 2.14
NKX2-1-203ENST00000518149 CSRNP3Q8WYN3 585 aa28.38■■■□□ 2.13
NKX2-1-203ENST00000518149 ZNF608Q9ULD9 1512 aaPredicted RBP28.34■■■□□ 2.13
NKX2-1-203ENST00000518149 WDR97A6NE52 1622 aa28.33■■■□□ 2.13
NKX2-1-203ENST00000518149 IFT140Q96RY7 1462 aa28.33■■■□□ 2.12
NKX2-1-203ENST00000518149 AQRO60306 1485 aaKnown RBP eCLIP28.32■■■□□ 2.12
NKX2-1-203ENST00000518149 EEA1Q15075 1411 aa28.31■■■□□ 2.12
NKX2-1-203ENST00000518149 IGF1RP08069 1367 aa28.24■■■□□ 2.11
NKX2-1-203ENST00000518149 GAPVD1Q14C86 1478 aa28.24■■■□□ 2.11
NKX2-1-203ENST00000518149 ABCA5Q8WWZ7 1642 aa28.21■■■□□ 2.11
NKX2-1-203ENST00000518149 ZNF316A6NFI3 1004 aaPredicted RBP28.19■■■□□ 2.1
NKX2-1-203ENST00000518149 EIF4G3O43432 1585 aaKnown RBP28.15■■■□□ 2.1
NKX2-1-203ENST00000518149 RAPGEF2Q9Y4G8 1499 aa28.11■■■□□ 2.09
NKX2-1-203ENST00000518149 CARMIL1Q5VZK9 1371 aa28.09■■■□□ 2.09
NKX2-1-203ENST00000518149 YTHDC1Q96MU7 727 aaKnown RBP28.08■■■□□ 2.09
NKX2-1-203ENST00000518149 PRXQ9BXM0 1461 aa28.08■■■□□ 2.09
NKX2-1-203ENST00000518149 TTBK1Q5TCY1 1321 aaPredicted RBP28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms