Protein–RNA interactions for Protein: Q9Y5H1

PCDHGA2, Protocadherin gamma-A2, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA2Q9Y5H1 DUX4L11-201ENST00000611504 1267 ntBASIC27.28■■□□□ 1.96
PCDHGA2Q9Y5H1 DUX4L12-201ENST00000614593 1267 ntBASIC27.28■■□□□ 1.96
PCDHGA2Q9Y5H1 LINC01971-201ENST00000617888 1048 ntBASIC27.28■■□□□ 1.96
PCDHGA2Q9Y5H1 DUX4L14-201ENST00000621227 1267 ntBASIC27.28■■□□□ 1.96
PCDHGA2Q9Y5H1 CR559946.2-201ENST00000623684 991 ntBASIC27.28■■□□□ 1.96
PCDHGA2Q9Y5H1 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
PCDHGA2Q9Y5H1 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHGA2Q9Y5H1 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHGA2Q9Y5H1 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC27.27■■□□□ 1.96
PCDHGA2Q9Y5H1 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
PCDHGA2Q9Y5H1 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC27.24■■□□□ 1.95
PCDHGA2Q9Y5H1 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PCDHGA2Q9Y5H1 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHGA2Q9Y5H1 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHGA2Q9Y5H1 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC27.2■■□□□ 1.94
PCDHGA2Q9Y5H1 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC27.2■■□□□ 1.94
PCDHGA2Q9Y5H1 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
PCDHGA2Q9Y5H1 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PCDHGA2Q9Y5H1 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC27.18■■□□□ 1.94
PCDHGA2Q9Y5H1 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
PCDHGA2Q9Y5H1 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC27.18■■□□□ 1.94
PCDHGA2Q9Y5H1 MIR6090-201ENST00000622481 60 ntBASIC27.18■■□□□ 1.94
PCDHGA2Q9Y5H1 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PCDHGA2Q9Y5H1 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDHGA2Q9Y5H1 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC27.17■■□□□ 1.94
PCDHGA2Q9Y5H1 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC27.16■■□□□ 1.94
PCDHGA2Q9Y5H1 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC27.16■■□□□ 1.94
PCDHGA2Q9Y5H1 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PCDHGA2Q9Y5H1 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC27.15■■□□□ 1.94
PCDHGA2Q9Y5H1 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PCDHGA2Q9Y5H1 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PCDHGA2Q9Y5H1 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PCDHGA2Q9Y5H1 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC27.12■■□□□ 1.93
PCDHGA2Q9Y5H1 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PCDHGA2Q9Y5H1 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
PCDHGA2Q9Y5H1 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
PCDHGA2Q9Y5H1 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC27.1■■□□□ 1.93
PCDHGA2Q9Y5H1 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
PCDHGA2Q9Y5H1 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
PCDHGA2Q9Y5H1 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC27.08■■□□□ 1.93
PCDHGA2Q9Y5H1 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC27.08■■□□□ 1.93
PCDHGA2Q9Y5H1 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
PCDHGA2Q9Y5H1 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
PCDHGA2Q9Y5H1 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
PCDHGA2Q9Y5H1 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC27.07■■□□□ 1.92
PCDHGA2Q9Y5H1 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
PCDHGA2Q9Y5H1 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
PCDHGA2Q9Y5H1 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
PCDHGA2Q9Y5H1 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
PCDHGA2Q9Y5H1 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
PCDHGA2Q9Y5H1 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC27.04■■□□□ 1.92
PCDHGA2Q9Y5H1 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PCDHGA2Q9Y5H1 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC27.04■■□□□ 1.92
PCDHGA2Q9Y5H1 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
PCDHGA2Q9Y5H1 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
PCDHGA2Q9Y5H1 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
PCDHGA2Q9Y5H1 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
PCDHGA2Q9Y5H1 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
PCDHGA2Q9Y5H1 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC26.99■■□□□ 1.91
PCDHGA2Q9Y5H1 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC26.98■■□□□ 1.91
PCDHGA2Q9Y5H1 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC26.97■■□□□ 1.91
PCDHGA2Q9Y5H1 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.97■■□□□ 1.91
PCDHGA2Q9Y5H1 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
PCDHGA2Q9Y5H1 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
PCDHGA2Q9Y5H1 METRNL-202ENST00000570778 967 ntTSL 5 BASIC26.96■■□□□ 1.91
PCDHGA2Q9Y5H1 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC26.95■■□□□ 1.91
PCDHGA2Q9Y5H1 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC26.95■■□□□ 1.9
PCDHGA2Q9Y5H1 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
PCDHGA2Q9Y5H1 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC26.94■■□□□ 1.9
PCDHGA2Q9Y5H1 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
PCDHGA2Q9Y5H1 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC26.94■■□□□ 1.9
PCDHGA2Q9Y5H1 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.94■■□□□ 1.9
PCDHGA2Q9Y5H1 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
PCDHGA2Q9Y5H1 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
PCDHGA2Q9Y5H1 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
PCDHGA2Q9Y5H1 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
PCDHGA2Q9Y5H1 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
PCDHGA2Q9Y5H1 RARRES2P2-201ENST00000394842 485 ntBASIC26.92■■□□□ 1.9
PCDHGA2Q9Y5H1 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.92■■□□□ 1.9
PCDHGA2Q9Y5H1 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC26.92■■□□□ 1.9
PCDHGA2Q9Y5H1 DUX4L13-201ENST00000554103 1267 ntBASIC26.92■■□□□ 1.9
PCDHGA2Q9Y5H1 DUX4L15-201ENST00000611059 1267 ntBASIC26.92■■□□□ 1.9
PCDHGA2Q9Y5H1 DUX4L23-201ENST00000615195 1269 ntBASIC26.92■■□□□ 1.9
PCDHGA2Q9Y5H1 DUX4L24-201ENST00000617576 1269 ntBASIC26.92■■□□□ 1.9
PCDHGA2Q9Y5H1 DUX4L22-201ENST00000618238 1269 ntBASIC26.92■■□□□ 1.9
PCDHGA2Q9Y5H1 DUX4L20-201ENST00000619712 1269 ntBASIC26.92■■□□□ 1.9
PCDHGA2Q9Y5H1 DUX4L21-201ENST00000622058 1269 ntBASIC26.92■■□□□ 1.9
PCDHGA2Q9Y5H1 DUX4L10-201ENST00000622460 1267 ntBASIC26.92■■□□□ 1.9
PCDHGA2Q9Y5H1 DUX4L25-201ENST00000624915 1269 ntBASIC26.92■■□□□ 1.9
PCDHGA2Q9Y5H1 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
PCDHGA2Q9Y5H1 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.91■■□□□ 1.9
PCDHGA2Q9Y5H1 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
PCDHGA2Q9Y5H1 ABHD17AP5-201ENST00000580133 923 ntBASIC26.9■■□□□ 1.9
PCDHGA2Q9Y5H1 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
PCDHGA2Q9Y5H1 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.89■■□□□ 1.9
PCDHGA2Q9Y5H1 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
PCDHGA2Q9Y5H1 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC26.89■■□□□ 1.89
PCDHGA2Q9Y5H1 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
PCDHGA2Q9Y5H1 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
PCDHGA2Q9Y5H1 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms