Protein–RNA interactions for Protein: Q9NQX0

PRDM6, Putative histone-lysine N-methyltransferase PRDM6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM6Q9NQX0 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
PRDM6Q9NQX0 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC28.8■■■□□ 2.2
PRDM6Q9NQX0 AC019069.1-201ENST00000610008 1333 ntBASIC28.8■■■□□ 2.2
PRDM6Q9NQX0 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
PRDM6Q9NQX0 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC28.78■■■□□ 2.2
PRDM6Q9NQX0 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC28.78■■■□□ 2.2
PRDM6Q9NQX0 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC28.78■■■□□ 2.2
PRDM6Q9NQX0 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC28.78■■■□□ 2.2
PRDM6Q9NQX0 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC28.77■■■□□ 2.2
PRDM6Q9NQX0 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
PRDM6Q9NQX0 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC28.75■■■□□ 2.19
PRDM6Q9NQX0 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
PRDM6Q9NQX0 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC28.74■■■□□ 2.19
PRDM6Q9NQX0 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
PRDM6Q9NQX0 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC28.73■■■□□ 2.19
PRDM6Q9NQX0 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC28.72■■■□□ 2.19
PRDM6Q9NQX0 AC108673.1-201ENST00000510422 1159 ntBASIC28.71■■■□□ 2.19
PRDM6Q9NQX0 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
PRDM6Q9NQX0 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC28.7■■■□□ 2.18
PRDM6Q9NQX0 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
PRDM6Q9NQX0 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC28.69■■■□□ 2.18
PRDM6Q9NQX0 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC28.69■■■□□ 2.18
PRDM6Q9NQX0 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
PRDM6Q9NQX0 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
PRDM6Q9NQX0 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
PRDM6Q9NQX0 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
PRDM6Q9NQX0 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC28.64■■■□□ 2.18
PRDM6Q9NQX0 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC28.62■■■□□ 2.17
PRDM6Q9NQX0 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC28.62■■■□□ 2.17
PRDM6Q9NQX0 SRP68-213ENST00000629930 165 ntTSL 5 BASIC28.62■■■□□ 2.17
PRDM6Q9NQX0 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC28.61■■■□□ 2.17
PRDM6Q9NQX0 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC28.61■■■□□ 2.17
PRDM6Q9NQX0 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
PRDM6Q9NQX0 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
PRDM6Q9NQX0 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
PRDM6Q9NQX0 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
PRDM6Q9NQX0 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC28.58■■■□□ 2.17
PRDM6Q9NQX0 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
PRDM6Q9NQX0 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC28.58■■■□□ 2.16
PRDM6Q9NQX0 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC28.57■■■□□ 2.16
PRDM6Q9NQX0 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
PRDM6Q9NQX0 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
PRDM6Q9NQX0 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
PRDM6Q9NQX0 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
PRDM6Q9NQX0 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
PRDM6Q9NQX0 GPX1-201ENST00000419349 1106 ntBASIC28.55■■■□□ 2.16
PRDM6Q9NQX0 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
PRDM6Q9NQX0 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC28.53■■■□□ 2.16
PRDM6Q9NQX0 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC28.53■■■□□ 2.16
PRDM6Q9NQX0 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
PRDM6Q9NQX0 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC28.52■■■□□ 2.16
PRDM6Q9NQX0 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
PRDM6Q9NQX0 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
PRDM6Q9NQX0 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
PRDM6Q9NQX0 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
PRDM6Q9NQX0 HES6-205ENST00000409356 528 ntTSL 2 BASIC28.51■■■□□ 2.15
PRDM6Q9NQX0 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
PRDM6Q9NQX0 DUX4L13-201ENST00000554103 1267 ntBASIC28.51■■■□□ 2.15
PRDM6Q9NQX0 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC28.51■■■□□ 2.15
PRDM6Q9NQX0 DUX4L15-201ENST00000611059 1267 ntBASIC28.51■■■□□ 2.15
PRDM6Q9NQX0 DUX4L23-201ENST00000615195 1269 ntBASIC28.51■■■□□ 2.15
PRDM6Q9NQX0 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
PRDM6Q9NQX0 DUX4L24-201ENST00000617576 1269 ntBASIC28.51■■■□□ 2.15
PRDM6Q9NQX0 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
PRDM6Q9NQX0 DUX4L22-201ENST00000618238 1269 ntBASIC28.51■■■□□ 2.15
PRDM6Q9NQX0 DUX4L20-201ENST00000619712 1269 ntBASIC28.51■■■□□ 2.15
PRDM6Q9NQX0 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
PRDM6Q9NQX0 DUX4L21-201ENST00000622058 1269 ntBASIC28.51■■■□□ 2.15
PRDM6Q9NQX0 DUX4L10-201ENST00000622460 1267 ntBASIC28.51■■■□□ 2.15
PRDM6Q9NQX0 DUX4L25-201ENST00000624915 1269 ntBASIC28.51■■■□□ 2.15
PRDM6Q9NQX0 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
PRDM6Q9NQX0 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
PRDM6Q9NQX0 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
PRDM6Q9NQX0 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
PRDM6Q9NQX0 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC28.5■■■□□ 2.15
PRDM6Q9NQX0 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
PRDM6Q9NQX0 AC012354.3-201ENST00000623734 483 ntBASIC28.5■■■□□ 2.15
PRDM6Q9NQX0 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC28.49■■■□□ 2.15
PRDM6Q9NQX0 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
PRDM6Q9NQX0 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
PRDM6Q9NQX0 RNF126P1-201ENST00000567452 1320 ntBASIC28.47■■■□□ 2.15
PRDM6Q9NQX0 AC018358.1-201ENST00000631079 1402 ntBASIC28.47■■■□□ 2.15
PRDM6Q9NQX0 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC28.47■■■□□ 2.15
PRDM6Q9NQX0 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
PRDM6Q9NQX0 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
PRDM6Q9NQX0 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
PRDM6Q9NQX0 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC28.46■■■□□ 2.15
PRDM6Q9NQX0 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
PRDM6Q9NQX0 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC28.43■■■□□ 2.14
PRDM6Q9NQX0 NTF6A-201ENST00000591175 560 ntBASIC28.43■■■□□ 2.14
PRDM6Q9NQX0 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC28.42■■■□□ 2.14
PRDM6Q9NQX0 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC28.42■■■□□ 2.14
PRDM6Q9NQX0 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
PRDM6Q9NQX0 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
PRDM6Q9NQX0 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
PRDM6Q9NQX0 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC28.39■■■□□ 2.14
PRDM6Q9NQX0 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
PRDM6Q9NQX0 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC28.38■■■□□ 2.13
PRDM6Q9NQX0 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
PRDM6Q9NQX0 AL033527.3-201ENST00000566366 1196 ntBASIC28.37■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 8.6 ms