Protein–RNA interactions for Protein: Q9H267

VPS33B, Vacuolar protein sorting-associated protein 33B, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33BQ9H267 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
VPS33BQ9H267 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC33.05■■■□□ 2.88
VPS33BQ9H267 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
VPS33BQ9H267 LINC01971-201ENST00000617888 1048 ntBASIC33.05■■■□□ 2.88
VPS33BQ9H267 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
VPS33BQ9H267 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC33.04■■■□□ 2.88
VPS33BQ9H267 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC33.03■■■□□ 2.88
VPS33BQ9H267 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC33.03■■■□□ 2.88
VPS33BQ9H267 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC33.03■■■□□ 2.88
VPS33BQ9H267 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC33.03■■■□□ 2.88
VPS33BQ9H267 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
VPS33BQ9H267 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
VPS33BQ9H267 DUX4L11-201ENST00000611504 1267 ntBASIC33.02■■■□□ 2.88
VPS33BQ9H267 DUX4L12-201ENST00000614593 1267 ntBASIC33.02■■■□□ 2.88
VPS33BQ9H267 DUX4L14-201ENST00000621227 1267 ntBASIC33.02■■■□□ 2.88
VPS33BQ9H267 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC33.02■■■□□ 2.88
VPS33BQ9H267 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC33.01■■■□□ 2.88
VPS33BQ9H267 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
VPS33BQ9H267 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC33■■■□□ 2.87
VPS33BQ9H267 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
VPS33BQ9H267 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC32.98■■■□□ 2.87
VPS33BQ9H267 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC32.98■■■□□ 2.87
VPS33BQ9H267 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
VPS33BQ9H267 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC32.96■■■□□ 2.87
VPS33BQ9H267 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC32.96■■■□□ 2.87
VPS33BQ9H267 HSD17B1P1-201ENST00000590052 955 ntBASIC32.95■■■□□ 2.87
VPS33BQ9H267 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC32.95■■■□□ 2.86
VPS33BQ9H267 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC32.94■■■□□ 2.86
VPS33BQ9H267 CR559946.2-201ENST00000623684 991 ntBASIC32.94■■■□□ 2.86
VPS33BQ9H267 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
VPS33BQ9H267 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
VPS33BQ9H267 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
VPS33BQ9H267 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
VPS33BQ9H267 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC32.9■■■□□ 2.86
VPS33BQ9H267 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC32.9■■■□□ 2.86
VPS33BQ9H267 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
VPS33BQ9H267 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
VPS33BQ9H267 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC32.88■■■□□ 2.85
VPS33BQ9H267 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC32.88■■■□□ 2.85
VPS33BQ9H267 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC32.87■■■□□ 2.85
VPS33BQ9H267 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC32.87■■■□□ 2.85
VPS33BQ9H267 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
VPS33BQ9H267 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC32.86■■■□□ 2.85
VPS33BQ9H267 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC32.85■■■□□ 2.85
VPS33BQ9H267 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
VPS33BQ9H267 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
VPS33BQ9H267 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC32.84■■■□□ 2.85
VPS33BQ9H267 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
VPS33BQ9H267 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC32.83■■■□□ 2.85
VPS33BQ9H267 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC32.82■■■□□ 2.84
VPS33BQ9H267 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC32.82■■■□□ 2.84
VPS33BQ9H267 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC32.81■■■□□ 2.84
VPS33BQ9H267 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
VPS33BQ9H267 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
VPS33BQ9H267 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
VPS33BQ9H267 BRD4-212ENST00000630599 726 ntTSL 2 BASIC32.8■■■□□ 2.84
VPS33BQ9H267 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC32.79■■■□□ 2.84
VPS33BQ9H267 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
VPS33BQ9H267 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
VPS33BQ9H267 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
VPS33BQ9H267 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
VPS33BQ9H267 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
VPS33BQ9H267 ABHD17AP3-201ENST00000503096 1137 ntBASIC32.73■■■□□ 2.83
VPS33BQ9H267 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
VPS33BQ9H267 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
VPS33BQ9H267 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC32.72■■■□□ 2.83
VPS33BQ9H267 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC32.72■■■□□ 2.83
VPS33BQ9H267 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
VPS33BQ9H267 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC32.7■■■□□ 2.82
VPS33BQ9H267 DUX4L13-201ENST00000554103 1267 ntBASIC32.68■■■□□ 2.82
VPS33BQ9H267 DUX4L15-201ENST00000611059 1267 ntBASIC32.68■■■□□ 2.82
VPS33BQ9H267 DUX4L23-201ENST00000615195 1269 ntBASIC32.68■■■□□ 2.82
VPS33BQ9H267 DUX4L24-201ENST00000617576 1269 ntBASIC32.68■■■□□ 2.82
VPS33BQ9H267 DUX4L22-201ENST00000618238 1269 ntBASIC32.68■■■□□ 2.82
VPS33BQ9H267 DUX4L20-201ENST00000619712 1269 ntBASIC32.68■■■□□ 2.82
VPS33BQ9H267 DUX4L21-201ENST00000622058 1269 ntBASIC32.68■■■□□ 2.82
VPS33BQ9H267 DUX4L10-201ENST00000622460 1267 ntBASIC32.68■■■□□ 2.82
VPS33BQ9H267 DUX4L25-201ENST00000624915 1269 ntBASIC32.68■■■□□ 2.82
VPS33BQ9H267 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
VPS33BQ9H267 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC32.67■■■□□ 2.82
VPS33BQ9H267 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC32.66■■■□□ 2.82
VPS33BQ9H267 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC32.65■■■□□ 2.82
VPS33BQ9H267 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC32.65■■■□□ 2.82
VPS33BQ9H267 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
VPS33BQ9H267 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC32.65■■■□□ 2.82
VPS33BQ9H267 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC32.63■■■□□ 2.81
VPS33BQ9H267 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC32.63■■■□□ 2.81
VPS33BQ9H267 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
VPS33BQ9H267 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
VPS33BQ9H267 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
VPS33BQ9H267 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC32.61■■■□□ 2.81
VPS33BQ9H267 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC32.61■■■□□ 2.81
VPS33BQ9H267 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC32.6■■■□□ 2.81
VPS33BQ9H267 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC32.59■■■□□ 2.81
VPS33BQ9H267 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC32.58■■■□□ 2.81
VPS33BQ9H267 METRNL-202ENST00000570778 967 ntTSL 5 BASIC32.58■■■□□ 2.81
VPS33BQ9H267 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC32.57■■■□□ 2.8
VPS33BQ9H267 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
VPS33BQ9H267 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
VPS33BQ9H267 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms