Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC35.46■■■■□ 3.27
PCDH11XQ9BZA7 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
PCDH11XQ9BZA7 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC35.43■■■■□ 3.26
PCDH11XQ9BZA7 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC35.43■■■■□ 3.26
PCDH11XQ9BZA7 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC35.43■■■■□ 3.26
PCDH11XQ9BZA7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC35.43■■■■□ 3.26
PCDH11XQ9BZA7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
PCDH11XQ9BZA7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC35.42■■■■□ 3.26
PCDH11XQ9BZA7 MIR639-201ENST00000384974 98 ntBASIC35.42■■■■□ 3.26
PCDH11XQ9BZA7 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
PCDH11XQ9BZA7 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC35.42■■■■□ 3.26
PCDH11XQ9BZA7 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC35.41■■■■□ 3.26
PCDH11XQ9BZA7 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
PCDH11XQ9BZA7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC35.4■■■■□ 3.26
PCDH11XQ9BZA7 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC35.38■■■■□ 3.25
PCDH11XQ9BZA7 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
PCDH11XQ9BZA7 RNF166-209ENST00000567844 633 ntTSL 5 BASIC35.37■■■■□ 3.25
PCDH11XQ9BZA7 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
PCDH11XQ9BZA7 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC35.37■■■■□ 3.25
PCDH11XQ9BZA7 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC35.36■■■■□ 3.25
PCDH11XQ9BZA7 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC35.35■■■■□ 3.25
PCDH11XQ9BZA7 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
PCDH11XQ9BZA7 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
PCDH11XQ9BZA7 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC35.34■■■■□ 3.25
PCDH11XQ9BZA7 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC35.34■■■■□ 3.25
PCDH11XQ9BZA7 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC35.34■■■■□ 3.25
PCDH11XQ9BZA7 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC35.33■■■■□ 3.25
PCDH11XQ9BZA7 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC35.32■■■■□ 3.25
PCDH11XQ9BZA7 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC35.32■■■■□ 3.24
PCDH11XQ9BZA7 MIR3648-2-201ENST00000581792 180 ntBASIC35.32■■■■□ 3.24
PCDH11XQ9BZA7 MIR3648-1-201ENST00000615959 180 ntBASIC35.32■■■■□ 3.24
PCDH11XQ9BZA7 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC35.3■■■■□ 3.24
PCDH11XQ9BZA7 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
PCDH11XQ9BZA7 AC016575.1-201ENST00000607026 382 ntBASIC35.29■■■■□ 3.24
PCDH11XQ9BZA7 LINC01971-201ENST00000617888 1048 ntBASIC35.29■■■■□ 3.24
PCDH11XQ9BZA7 GDI1-215ENST00000630693 786 ntTSL 4 BASIC35.29■■■■□ 3.24
PCDH11XQ9BZA7 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC35.27■■■■□ 3.24
PCDH11XQ9BZA7 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
PCDH11XQ9BZA7 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.24
PCDH11XQ9BZA7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC35.26■■■■□ 3.24
PCDH11XQ9BZA7 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC35.26■■■■□ 3.23
PCDH11XQ9BZA7 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.23
PCDH11XQ9BZA7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
PCDH11XQ9BZA7 DUX4L11-201ENST00000611504 1267 ntBASIC35.25■■■■□ 3.23
PCDH11XQ9BZA7 DUX4L12-201ENST00000614593 1267 ntBASIC35.25■■■■□ 3.23
PCDH11XQ9BZA7 DUX4L14-201ENST00000621227 1267 ntBASIC35.25■■■■□ 3.23
PCDH11XQ9BZA7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC35.23■■■■□ 3.23
PCDH11XQ9BZA7 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC35.23■■■■□ 3.23
PCDH11XQ9BZA7 CR559946.2-201ENST00000623684 991 ntBASIC35.23■■■■□ 3.23
PCDH11XQ9BZA7 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC35.23■■■■□ 3.23
PCDH11XQ9BZA7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC35.21■■■■□ 3.23
PCDH11XQ9BZA7 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC35.21■■■■□ 3.23
PCDH11XQ9BZA7 AGPS-202ENST00000409888 815 ntTSL 4 BASIC35.21■■■■□ 3.23
PCDH11XQ9BZA7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC35.21■■■■□ 3.23
PCDH11XQ9BZA7 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
PCDH11XQ9BZA7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
PCDH11XQ9BZA7 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
PCDH11XQ9BZA7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC35.18■■■■□ 3.22
PCDH11XQ9BZA7 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC35.17■■■■□ 3.22
PCDH11XQ9BZA7 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
PCDH11XQ9BZA7 CALM3-209ENST00000597743 577 ntTSL 4 BASIC35.16■■■■□ 3.22
PCDH11XQ9BZA7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC35.14■■■■□ 3.22
PCDH11XQ9BZA7 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC35.13■■■■□ 3.21
PCDH11XQ9BZA7 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
PCDH11XQ9BZA7 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC35.12■■■■□ 3.21
PCDH11XQ9BZA7 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC35.12■■■■□ 3.21
PCDH11XQ9BZA7 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC35.12■■■■□ 3.21
PCDH11XQ9BZA7 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
PCDH11XQ9BZA7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC35.1■■■■□ 3.21
PCDH11XQ9BZA7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC35.1■■■■□ 3.21
PCDH11XQ9BZA7 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC35.1■■■■□ 3.21
PCDH11XQ9BZA7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC35.08■■■■□ 3.21
PCDH11XQ9BZA7 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.21
PCDH11XQ9BZA7 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
PCDH11XQ9BZA7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC35.06■■■■□ 3.2
PCDH11XQ9BZA7 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC35.05■■■■□ 3.2
PCDH11XQ9BZA7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
PCDH11XQ9BZA7 HSD17B1P1-201ENST00000590052 955 ntBASIC35.05■■■■□ 3.2
PCDH11XQ9BZA7 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC35.04■■■■□ 3.2
PCDH11XQ9BZA7 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC35.04■■■■□ 3.2
PCDH11XQ9BZA7 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC35.04■■■■□ 3.2
PCDH11XQ9BZA7 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC35.04■■■■□ 3.2
PCDH11XQ9BZA7 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC35.04■■■■□ 3.2
PCDH11XQ9BZA7 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
PCDH11XQ9BZA7 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
PCDH11XQ9BZA7 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
PCDH11XQ9BZA7 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC35.02■■■■□ 3.2
PCDH11XQ9BZA7 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC35.02■■■■□ 3.2
PCDH11XQ9BZA7 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
PCDH11XQ9BZA7 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC35.01■■■■□ 3.2
PCDH11XQ9BZA7 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC35.01■■■■□ 3.19
PCDH11XQ9BZA7 AC120057.4-201ENST00000624722 1615 ntBASIC35■■■■□ 3.19
PCDH11XQ9BZA7 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC34.99■■■■□ 3.19
PCDH11XQ9BZA7 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC34.99■■■■□ 3.19
PCDH11XQ9BZA7 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
PCDH11XQ9BZA7 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC34.98■■■■□ 3.19
PCDH11XQ9BZA7 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC34.96■■■■□ 3.19
PCDH11XQ9BZA7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC34.96■■■■□ 3.19
PCDH11XQ9BZA7 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC34.94■■■■□ 3.18
PCDH11XQ9BZA7 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC34.94■■■■□ 3.18
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms