Protein–RNA interactions for Protein: Q96P71

NECAB3, N-terminal EF-hand calcium-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3Q96P71 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
NECAB3Q96P71 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
NECAB3Q96P71 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC28.4■■■□□ 2.14
NECAB3Q96P71 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC28.39■■■□□ 2.14
NECAB3Q96P71 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
NECAB3Q96P71 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
NECAB3Q96P71 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC28.37■■■□□ 2.13
NECAB3Q96P71 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
NECAB3Q96P71 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC28.36■■■□□ 2.13
NECAB3Q96P71 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC28.36■■■□□ 2.13
NECAB3Q96P71 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
NECAB3Q96P71 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
NECAB3Q96P71 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC28.35■■■□□ 2.13
NECAB3Q96P71 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC28.34■■■□□ 2.13
NECAB3Q96P71 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
NECAB3Q96P71 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC28.33■■■□□ 2.13
NECAB3Q96P71 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
NECAB3Q96P71 AC108673.1-201ENST00000510422 1159 ntBASIC28.32■■■□□ 2.12
NECAB3Q96P71 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
NECAB3Q96P71 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
NECAB3Q96P71 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC28.31■■■□□ 2.12
NECAB3Q96P71 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC28.3■■■□□ 2.12
NECAB3Q96P71 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
NECAB3Q96P71 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
NECAB3Q96P71 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
NECAB3Q96P71 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
NECAB3Q96P71 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC28.27■■■□□ 2.12
NECAB3Q96P71 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC28.27■■■□□ 2.12
NECAB3Q96P71 SRP68-213ENST00000629930 165 ntTSL 5 BASIC28.27■■■□□ 2.12
NECAB3Q96P71 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
NECAB3Q96P71 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
NECAB3Q96P71 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
NECAB3Q96P71 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
NECAB3Q96P71 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC28.22■■■□□ 2.11
NECAB3Q96P71 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
NECAB3Q96P71 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
NECAB3Q96P71 GPX1-201ENST00000419349 1106 ntBASIC28.21■■■□□ 2.11
NECAB3Q96P71 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC28.2■■■□□ 2.1
NECAB3Q96P71 AC012354.3-201ENST00000623734 483 ntBASIC28.2■■■□□ 2.1
NECAB3Q96P71 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
NECAB3Q96P71 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
NECAB3Q96P71 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
NECAB3Q96P71 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
NECAB3Q96P71 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
NECAB3Q96P71 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
NECAB3Q96P71 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC28.17■■■□□ 2.1
NECAB3Q96P71 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC28.17■■■□□ 2.1
NECAB3Q96P71 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
NECAB3Q96P71 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
NECAB3Q96P71 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
NECAB3Q96P71 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
NECAB3Q96P71 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
NECAB3Q96P71 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
NECAB3Q96P71 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
NECAB3Q96P71 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
NECAB3Q96P71 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
NECAB3Q96P71 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC28.15■■■□□ 2.1
NECAB3Q96P71 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC28.15■■■□□ 2.1
NECAB3Q96P71 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
NECAB3Q96P71 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
NECAB3Q96P71 RNF126P1-201ENST00000567452 1320 ntBASIC28.15■■■□□ 2.1
NECAB3Q96P71 HES6-205ENST00000409356 528 ntTSL 2 BASIC28.14■■■□□ 2.1
NECAB3Q96P71 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC28.14■■■□□ 2.1
NECAB3Q96P71 DUX4L13-201ENST00000554103 1267 ntBASIC28.13■■■□□ 2.09
NECAB3Q96P71 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC28.13■■■□□ 2.09
NECAB3Q96P71 DUX4L15-201ENST00000611059 1267 ntBASIC28.13■■■□□ 2.09
NECAB3Q96P71 DUX4L23-201ENST00000615195 1269 ntBASIC28.13■■■□□ 2.09
NECAB3Q96P71 DUX4L24-201ENST00000617576 1269 ntBASIC28.13■■■□□ 2.09
NECAB3Q96P71 DUX4L22-201ENST00000618238 1269 ntBASIC28.13■■■□□ 2.09
NECAB3Q96P71 DUX4L20-201ENST00000619712 1269 ntBASIC28.13■■■□□ 2.09
NECAB3Q96P71 DUX4L21-201ENST00000622058 1269 ntBASIC28.13■■■□□ 2.09
NECAB3Q96P71 DUX4L10-201ENST00000622460 1267 ntBASIC28.13■■■□□ 2.09
NECAB3Q96P71 DUX4L25-201ENST00000624915 1269 ntBASIC28.13■■■□□ 2.09
NECAB3Q96P71 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
NECAB3Q96P71 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
NECAB3Q96P71 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
NECAB3Q96P71 NTF6A-201ENST00000591175 560 ntBASIC28.11■■■□□ 2.09
NECAB3Q96P71 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
NECAB3Q96P71 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
NECAB3Q96P71 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
NECAB3Q96P71 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
NECAB3Q96P71 AC018358.1-201ENST00000631079 1402 ntBASIC28.09■■■□□ 2.09
NECAB3Q96P71 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
NECAB3Q96P71 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC28.09■■■□□ 2.09
NECAB3Q96P71 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC28.09■■■□□ 2.09
NECAB3Q96P71 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
NECAB3Q96P71 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
NECAB3Q96P71 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC28.07■■■□□ 2.08
NECAB3Q96P71 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
NECAB3Q96P71 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
NECAB3Q96P71 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
NECAB3Q96P71 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
NECAB3Q96P71 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
NECAB3Q96P71 AL033527.3-201ENST00000566366 1196 ntBASIC28.04■■■□□ 2.08
NECAB3Q96P71 AC008813.1-201ENST00000536597 885 ntBASIC28.03■■■□□ 2.08
NECAB3Q96P71 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC28.02■■■□□ 2.08
NECAB3Q96P71 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC28.02■■■□□ 2.08
NECAB3Q96P71 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC28.02■■■□□ 2.08
NECAB3Q96P71 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC28.01■■■□□ 2.07
NECAB3Q96P71 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms