Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
TMEFF1Q8IYR6 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.88■■□□□ 1.89
TMEFF1Q8IYR6 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.88■■□□□ 1.89
TMEFF1Q8IYR6 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC26.88■■□□□ 1.89
TMEFF1Q8IYR6 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC26.86■■□□□ 1.89
TMEFF1Q8IYR6 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
TMEFF1Q8IYR6 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.85■■□□□ 1.89
TMEFF1Q8IYR6 AC016575.1-201ENST00000607026 382 ntBASIC26.85■■□□□ 1.89
TMEFF1Q8IYR6 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
TMEFF1Q8IYR6 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
TMEFF1Q8IYR6 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
TMEFF1Q8IYR6 MIR3648-2-201ENST00000581792 180 ntBASIC26.83■■□□□ 1.89
TMEFF1Q8IYR6 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
TMEFF1Q8IYR6 MIR3648-1-201ENST00000615959 180 ntBASIC26.83■■□□□ 1.89
TMEFF1Q8IYR6 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
TMEFF1Q8IYR6 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC26.82■■□□□ 1.88
TMEFF1Q8IYR6 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.82■■□□□ 1.88
TMEFF1Q8IYR6 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
TMEFF1Q8IYR6 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
TMEFF1Q8IYR6 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.81■■□□□ 1.88
TMEFF1Q8IYR6 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.81■■□□□ 1.88
TMEFF1Q8IYR6 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC26.81■■□□□ 1.88
TMEFF1Q8IYR6 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
TMEFF1Q8IYR6 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
TMEFF1Q8IYR6 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
TMEFF1Q8IYR6 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
TMEFF1Q8IYR6 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
TMEFF1Q8IYR6 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.77■■□□□ 1.88
TMEFF1Q8IYR6 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.77■■□□□ 1.88
TMEFF1Q8IYR6 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
TMEFF1Q8IYR6 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
TMEFF1Q8IYR6 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC26.75■■□□□ 1.87
TMEFF1Q8IYR6 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
TMEFF1Q8IYR6 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
TMEFF1Q8IYR6 DUX4L11-201ENST00000611504 1267 ntBASIC26.75■■□□□ 1.87
TMEFF1Q8IYR6 DUX4L12-201ENST00000614593 1267 ntBASIC26.75■■□□□ 1.87
TMEFF1Q8IYR6 DUX4L14-201ENST00000621227 1267 ntBASIC26.75■■□□□ 1.87
TMEFF1Q8IYR6 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC26.75■■□□□ 1.87
TMEFF1Q8IYR6 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC26.74■■□□□ 1.87
TMEFF1Q8IYR6 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
TMEFF1Q8IYR6 LINC01971-201ENST00000617888 1048 ntBASIC26.72■■□□□ 1.87
TMEFF1Q8IYR6 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
TMEFF1Q8IYR6 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.71■■□□□ 1.87
TMEFF1Q8IYR6 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC26.71■■□□□ 1.87
TMEFF1Q8IYR6 CR559946.2-201ENST00000623684 991 ntBASIC26.71■■□□□ 1.87
TMEFF1Q8IYR6 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
TMEFF1Q8IYR6 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
TMEFF1Q8IYR6 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.7■■□□□ 1.86
TMEFF1Q8IYR6 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
TMEFF1Q8IYR6 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC26.7■■□□□ 1.86
TMEFF1Q8IYR6 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
TMEFF1Q8IYR6 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC26.7■■□□□ 1.86
TMEFF1Q8IYR6 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
TMEFF1Q8IYR6 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
TMEFF1Q8IYR6 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.69■■□□□ 1.86
TMEFF1Q8IYR6 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.68■■□□□ 1.86
TMEFF1Q8IYR6 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC26.68■■□□□ 1.86
TMEFF1Q8IYR6 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.67■■□□□ 1.86
TMEFF1Q8IYR6 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
TMEFF1Q8IYR6 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.67■■□□□ 1.86
TMEFF1Q8IYR6 HSD17B1P1-201ENST00000590052 955 ntBASIC26.67■■□□□ 1.86
TMEFF1Q8IYR6 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.67■■□□□ 1.86
TMEFF1Q8IYR6 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
TMEFF1Q8IYR6 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TMEFF1Q8IYR6 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
TMEFF1Q8IYR6 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
TMEFF1Q8IYR6 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
TMEFF1Q8IYR6 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
TMEFF1Q8IYR6 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC26.63■■□□□ 1.85
TMEFF1Q8IYR6 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
TMEFF1Q8IYR6 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
TMEFF1Q8IYR6 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
TMEFF1Q8IYR6 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
TMEFF1Q8IYR6 BRD4-212ENST00000630599 726 ntTSL 2 BASIC26.59■■□□□ 1.85
TMEFF1Q8IYR6 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
TMEFF1Q8IYR6 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
TMEFF1Q8IYR6 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC26.57■■□□□ 1.84
TMEFF1Q8IYR6 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
TMEFF1Q8IYR6 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
TMEFF1Q8IYR6 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
TMEFF1Q8IYR6 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
TMEFF1Q8IYR6 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.56■■□□□ 1.84
TMEFF1Q8IYR6 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC26.56■■□□□ 1.84
TMEFF1Q8IYR6 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
TMEFF1Q8IYR6 ABHD17AP3-201ENST00000503096 1137 ntBASIC26.55■■□□□ 1.84
TMEFF1Q8IYR6 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
TMEFF1Q8IYR6 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TMEFF1Q8IYR6 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC26.54■■□□□ 1.84
TMEFF1Q8IYR6 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TMEFF1Q8IYR6 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TMEFF1Q8IYR6 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TMEFF1Q8IYR6 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
TMEFF1Q8IYR6 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TMEFF1Q8IYR6 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.52■■□□□ 1.84
TMEFF1Q8IYR6 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TMEFF1Q8IYR6 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC26.5■■□□□ 1.83
TMEFF1Q8IYR6 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
TMEFF1Q8IYR6 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
TMEFF1Q8IYR6 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
TMEFF1Q8IYR6 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.48■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms