Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CCDC60Q8IWA6 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
CCDC60Q8IWA6 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
CCDC60Q8IWA6 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC29.94■■■□□ 2.38
CCDC60Q8IWA6 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
CCDC60Q8IWA6 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC29.93■■■□□ 2.38
CCDC60Q8IWA6 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC29.93■■■□□ 2.38
CCDC60Q8IWA6 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC29.92■■■□□ 2.38
CCDC60Q8IWA6 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC29.9■■■□□ 2.38
CCDC60Q8IWA6 AL161658.1-201ENST00000623641 1967 ntBASIC29.9■■■□□ 2.38
CCDC60Q8IWA6 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC29.89■■■□□ 2.38
CCDC60Q8IWA6 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
CCDC60Q8IWA6 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
CCDC60Q8IWA6 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CCDC60Q8IWA6 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CCDC60Q8IWA6 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
CCDC60Q8IWA6 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC29.87■■■□□ 2.37
CCDC60Q8IWA6 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC29.87■■■□□ 2.37
CCDC60Q8IWA6 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
CCDC60Q8IWA6 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
CCDC60Q8IWA6 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
CCDC60Q8IWA6 BOD1-206ENST00000480951 814 ntTSL 2 BASIC29.85■■■□□ 2.37
CCDC60Q8IWA6 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
CCDC60Q8IWA6 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
CCDC60Q8IWA6 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
CCDC60Q8IWA6 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC29.83■■■□□ 2.37
CCDC60Q8IWA6 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
CCDC60Q8IWA6 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
CCDC60Q8IWA6 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC29.83■■■□□ 2.37
CCDC60Q8IWA6 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
CCDC60Q8IWA6 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
CCDC60Q8IWA6 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CCDC60Q8IWA6 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC29.82■■■□□ 2.36
CCDC60Q8IWA6 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC29.81■■■□□ 2.36
CCDC60Q8IWA6 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC29.8■■■□□ 2.36
CCDC60Q8IWA6 MLEC-202ENST00000412616 841 ntTSL 3 BASIC29.8■■■□□ 2.36
CCDC60Q8IWA6 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
CCDC60Q8IWA6 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC29.8■■■□□ 2.36
CCDC60Q8IWA6 ABHD17AP4-201ENST00000411545 909 ntBASIC29.79■■■□□ 2.36
CCDC60Q8IWA6 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC29.79■■■□□ 2.36
CCDC60Q8IWA6 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC29.79■■■□□ 2.36
CCDC60Q8IWA6 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
CCDC60Q8IWA6 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
CCDC60Q8IWA6 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC29.78■■■□□ 2.36
CCDC60Q8IWA6 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
CCDC60Q8IWA6 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
CCDC60Q8IWA6 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
CCDC60Q8IWA6 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC29.76■■■□□ 2.36
CCDC60Q8IWA6 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
CCDC60Q8IWA6 MIR6090-201ENST00000622481 60 ntBASIC29.76■■■□□ 2.35
CCDC60Q8IWA6 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC29.75■■■□□ 2.35
CCDC60Q8IWA6 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC29.75■■■□□ 2.35
CCDC60Q8IWA6 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CCDC60Q8IWA6 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC29.75■■■□□ 2.35
CCDC60Q8IWA6 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC29.74■■■□□ 2.35
CCDC60Q8IWA6 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC29.74■■■□□ 2.35
CCDC60Q8IWA6 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC29.73■■■□□ 2.35
CCDC60Q8IWA6 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC29.73■■■□□ 2.35
CCDC60Q8IWA6 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
CCDC60Q8IWA6 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC29.72■■■□□ 2.35
CCDC60Q8IWA6 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC29.72■■■□□ 2.35
CCDC60Q8IWA6 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC29.72■■■□□ 2.35
CCDC60Q8IWA6 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CCDC60Q8IWA6 AC108673.1-201ENST00000510422 1159 ntBASIC29.71■■■□□ 2.35
CCDC60Q8IWA6 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC29.71■■■□□ 2.35
CCDC60Q8IWA6 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
CCDC60Q8IWA6 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
CCDC60Q8IWA6 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC29.69■■■□□ 2.34
CCDC60Q8IWA6 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC29.69■■■□□ 2.34
CCDC60Q8IWA6 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
CCDC60Q8IWA6 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC29.68■■■□□ 2.34
CCDC60Q8IWA6 HGH1-207ENST00000628266 258 ntTSL 5 BASIC29.68■■■□□ 2.34
CCDC60Q8IWA6 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC29.68■■■□□ 2.34
CCDC60Q8IWA6 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC29.67■■■□□ 2.34
CCDC60Q8IWA6 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
CCDC60Q8IWA6 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
CCDC60Q8IWA6 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
CCDC60Q8IWA6 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
CCDC60Q8IWA6 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC29.65■■■□□ 2.34
CCDC60Q8IWA6 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
CCDC60Q8IWA6 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
CCDC60Q8IWA6 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC29.65■■■□□ 2.34
CCDC60Q8IWA6 CIB2-204ENST00000557846 934 ntTSL 3 BASIC29.65■■■□□ 2.34
CCDC60Q8IWA6 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC29.65■■■□□ 2.34
CCDC60Q8IWA6 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
CCDC60Q8IWA6 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
CCDC60Q8IWA6 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
CCDC60Q8IWA6 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
CCDC60Q8IWA6 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
CCDC60Q8IWA6 DUX4L29-201ENST00000425409 679 ntBASIC29.63■■■□□ 2.33
CCDC60Q8IWA6 AC021231.2-201ENST00000594613 730 ntBASIC29.63■■■□□ 2.33
CCDC60Q8IWA6 MIR7108-201ENST00000614319 87 ntBASIC29.63■■■□□ 2.33
CCDC60Q8IWA6 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC29.62■■■□□ 2.33
CCDC60Q8IWA6 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC29.61■■■□□ 2.33
CCDC60Q8IWA6 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
CCDC60Q8IWA6 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC29.6■■■□□ 2.33
CCDC60Q8IWA6 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
CCDC60Q8IWA6 ZNRF2P2-203ENST00000454624 420 ntBASIC29.6■■■□□ 2.33
CCDC60Q8IWA6 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
CCDC60Q8IWA6 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC29.59■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms