Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
RNF180Q86T96 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC30.23■■■□□ 2.43
RNF180Q86T96 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
RNF180Q86T96 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC30.23■■■□□ 2.43
RNF180Q86T96 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
RNF180Q86T96 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
RNF180Q86T96 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
RNF180Q86T96 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC30.22■■■□□ 2.43
RNF180Q86T96 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC30.21■■■□□ 2.43
RNF180Q86T96 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
RNF180Q86T96 AGPS-202ENST00000409888 815 ntTSL 4 BASIC30.2■■■□□ 2.43
RNF180Q86T96 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC30.2■■■□□ 2.43
RNF180Q86T96 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC30.19■■■□□ 2.42
RNF180Q86T96 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC30.19■■■□□ 2.42
RNF180Q86T96 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC30.19■■■□□ 2.42
RNF180Q86T96 LINC01971-201ENST00000617888 1048 ntBASIC30.19■■■□□ 2.42
RNF180Q86T96 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
RNF180Q86T96 DUX4L11-201ENST00000611504 1267 ntBASIC30.18■■■□□ 2.42
RNF180Q86T96 DUX4L12-201ENST00000614593 1267 ntBASIC30.18■■■□□ 2.42
RNF180Q86T96 DUX4L14-201ENST00000621227 1267 ntBASIC30.18■■■□□ 2.42
RNF180Q86T96 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
RNF180Q86T96 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.18■■■□□ 2.42
RNF180Q86T96 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
RNF180Q86T96 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC30.16■■■□□ 2.42
RNF180Q86T96 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC30.16■■■□□ 2.42
RNF180Q86T96 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC30.16■■■□□ 2.42
RNF180Q86T96 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.15■■■□□ 2.42
RNF180Q86T96 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
RNF180Q86T96 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
RNF180Q86T96 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
RNF180Q86T96 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC30.13■■■□□ 2.41
RNF180Q86T96 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC30.13■■■□□ 2.41
RNF180Q86T96 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
RNF180Q86T96 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
RNF180Q86T96 HSD17B1P1-201ENST00000590052 955 ntBASIC30.12■■■□□ 2.41
RNF180Q86T96 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
RNF180Q86T96 CR559946.2-201ENST00000623684 991 ntBASIC30.12■■■□□ 2.41
RNF180Q86T96 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
RNF180Q86T96 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
RNF180Q86T96 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC30.11■■■□□ 2.41
RNF180Q86T96 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
RNF180Q86T96 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC30.09■■■□□ 2.41
RNF180Q86T96 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC30.08■■■□□ 2.41
RNF180Q86T96 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC30.07■■■□□ 2.4
RNF180Q86T96 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC30.07■■■□□ 2.4
RNF180Q86T96 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
RNF180Q86T96 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
RNF180Q86T96 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
RNF180Q86T96 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC30.05■■■□□ 2.4
RNF180Q86T96 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC30.04■■■□□ 2.4
RNF180Q86T96 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
RNF180Q86T96 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.03■■■□□ 2.4
RNF180Q86T96 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
RNF180Q86T96 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
RNF180Q86T96 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC30.01■■■□□ 2.39
RNF180Q86T96 BRD4-212ENST00000630599 726 ntTSL 2 BASIC30.01■■■□□ 2.39
RNF180Q86T96 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC30■■■□□ 2.39
RNF180Q86T96 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC29.99■■■□□ 2.39
RNF180Q86T96 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
RNF180Q86T96 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
RNF180Q86T96 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
RNF180Q86T96 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
RNF180Q86T96 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC29.95■■■□□ 2.39
RNF180Q86T96 ABHD17AP3-201ENST00000503096 1137 ntBASIC29.95■■■□□ 2.39
RNF180Q86T96 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
RNF180Q86T96 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
RNF180Q86T96 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC29.94■■■□□ 2.38
RNF180Q86T96 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
RNF180Q86T96 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
RNF180Q86T96 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC29.92■■■□□ 2.38
RNF180Q86T96 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC29.92■■■□□ 2.38
RNF180Q86T96 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC29.91■■■□□ 2.38
RNF180Q86T96 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
RNF180Q86T96 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
RNF180Q86T96 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
RNF180Q86T96 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
RNF180Q86T96 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC29.88■■■□□ 2.37
RNF180Q86T96 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC29.88■■■□□ 2.37
RNF180Q86T96 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC29.87■■■□□ 2.37
RNF180Q86T96 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC29.87■■■□□ 2.37
RNF180Q86T96 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC29.86■■■□□ 2.37
RNF180Q86T96 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC29.86■■■□□ 2.37
RNF180Q86T96 DUX4L13-201ENST00000554103 1267 ntBASIC29.85■■■□□ 2.37
RNF180Q86T96 DUX4L15-201ENST00000611059 1267 ntBASIC29.85■■■□□ 2.37
RNF180Q86T96 DUX4L23-201ENST00000615195 1269 ntBASIC29.85■■■□□ 2.37
RNF180Q86T96 DUX4L24-201ENST00000617576 1269 ntBASIC29.85■■■□□ 2.37
RNF180Q86T96 DUX4L22-201ENST00000618238 1269 ntBASIC29.85■■■□□ 2.37
RNF180Q86T96 DUX4L20-201ENST00000619712 1269 ntBASIC29.85■■■□□ 2.37
RNF180Q86T96 DUX4L21-201ENST00000622058 1269 ntBASIC29.85■■■□□ 2.37
RNF180Q86T96 DUX4L10-201ENST00000622460 1267 ntBASIC29.85■■■□□ 2.37
RNF180Q86T96 DUX4L25-201ENST00000624915 1269 ntBASIC29.85■■■□□ 2.37
RNF180Q86T96 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC29.84■■■□□ 2.37
RNF180Q86T96 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC29.84■■■□□ 2.37
RNF180Q86T96 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC29.83■■■□□ 2.37
RNF180Q86T96 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC29.83■■■□□ 2.37
RNF180Q86T96 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC29.83■■■□□ 2.37
RNF180Q86T96 METRNL-202ENST00000570778 967 ntTSL 5 BASIC29.82■■■□□ 2.36
RNF180Q86T96 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC29.81■■■□□ 2.36
RNF180Q86T96 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
RNF180Q86T96 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms