Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
USH1GQ495M9 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC30.84■■■□□ 2.53
USH1GQ495M9 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
USH1GQ495M9 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC30.82■■■□□ 2.52
USH1GQ495M9 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC30.81■■■□□ 2.52
USH1GQ495M9 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
USH1GQ495M9 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
USH1GQ495M9 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
USH1GQ495M9 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
USH1GQ495M9 AL161658.1-201ENST00000623641 1967 ntBASIC30.78■■■□□ 2.52
USH1GQ495M9 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
USH1GQ495M9 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
USH1GQ495M9 BOD1-206ENST00000480951 814 ntTSL 2 BASIC30.78■■■□□ 2.52
USH1GQ495M9 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
USH1GQ495M9 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
USH1GQ495M9 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
USH1GQ495M9 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
USH1GQ495M9 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC30.73■■■□□ 2.51
USH1GQ495M9 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC30.73■■■□□ 2.51
USH1GQ495M9 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
USH1GQ495M9 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
USH1GQ495M9 ABHD17AP4-201ENST00000411545 909 ntBASIC30.72■■■□□ 2.51
USH1GQ495M9 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC30.72■■■□□ 2.51
USH1GQ495M9 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
USH1GQ495M9 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
USH1GQ495M9 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC30.71■■■□□ 2.51
USH1GQ495M9 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
USH1GQ495M9 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
USH1GQ495M9 MLEC-202ENST00000412616 841 ntTSL 3 BASIC30.7■■■□□ 2.51
USH1GQ495M9 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC30.7■■■□□ 2.51
USH1GQ495M9 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC30.7■■■□□ 2.51
USH1GQ495M9 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
USH1GQ495M9 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
USH1GQ495M9 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
USH1GQ495M9 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC30.69■■■□□ 2.5
USH1GQ495M9 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC30.68■■■□□ 2.5
USH1GQ495M9 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
USH1GQ495M9 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC30.66■■■□□ 2.5
USH1GQ495M9 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC30.66■■■□□ 2.5
USH1GQ495M9 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
USH1GQ495M9 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC30.65■■■□□ 2.5
USH1GQ495M9 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
USH1GQ495M9 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
USH1GQ495M9 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
USH1GQ495M9 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC30.64■■■□□ 2.5
USH1GQ495M9 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC30.64■■■□□ 2.5
USH1GQ495M9 MIR6090-201ENST00000622481 60 ntBASIC30.64■■■□□ 2.5
USH1GQ495M9 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
USH1GQ495M9 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
USH1GQ495M9 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC30.62■■■□□ 2.49
USH1GQ495M9 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC30.62■■■□□ 2.49
USH1GQ495M9 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC30.61■■■□□ 2.49
USH1GQ495M9 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
USH1GQ495M9 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC30.61■■■□□ 2.49
USH1GQ495M9 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC30.6■■■□□ 2.49
USH1GQ495M9 AC108673.1-201ENST00000510422 1159 ntBASIC30.6■■■□□ 2.49
USH1GQ495M9 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC30.6■■■□□ 2.49
USH1GQ495M9 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC30.59■■■□□ 2.49
USH1GQ495M9 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
USH1GQ495M9 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
USH1GQ495M9 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
USH1GQ495M9 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC30.58■■■□□ 2.49
USH1GQ495M9 CIB2-204ENST00000557846 934 ntTSL 3 BASIC30.58■■■□□ 2.49
USH1GQ495M9 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC30.58■■■□□ 2.49
USH1GQ495M9 MIR7108-201ENST00000614319 87 ntBASIC30.58■■■□□ 2.49
USH1GQ495M9 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.49
USH1GQ495M9 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
USH1GQ495M9 HGH1-207ENST00000628266 258 ntTSL 5 BASIC30.57■■■□□ 2.48
USH1GQ495M9 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
USH1GQ495M9 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC30.56■■■□□ 2.48
USH1GQ495M9 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
USH1GQ495M9 DUX4L29-201ENST00000425409 679 ntBASIC30.55■■■□□ 2.48
USH1GQ495M9 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC30.55■■■□□ 2.48
USH1GQ495M9 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC30.55■■■□□ 2.48
USH1GQ495M9 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC30.54■■■□□ 2.48
USH1GQ495M9 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
USH1GQ495M9 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC30.53■■■□□ 2.48
USH1GQ495M9 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
USH1GQ495M9 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
USH1GQ495M9 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC30.52■■■□□ 2.48
USH1GQ495M9 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC30.52■■■□□ 2.48
USH1GQ495M9 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
USH1GQ495M9 ZNRF2P2-203ENST00000454624 420 ntBASIC30.51■■■□□ 2.47
USH1GQ495M9 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC30.51■■■□□ 2.47
USH1GQ495M9 AC021231.2-201ENST00000594613 730 ntBASIC30.51■■■□□ 2.47
USH1GQ495M9 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
USH1GQ495M9 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
USH1GQ495M9 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
USH1GQ495M9 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
USH1GQ495M9 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
USH1GQ495M9 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
USH1GQ495M9 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC30.49■■■□□ 2.47
USH1GQ495M9 PVT1-219ENST00000523427 938 ntTSL 3 BASIC30.49■■■□□ 2.47
USH1GQ495M9 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
USH1GQ495M9 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC30.48■■■□□ 2.47
USH1GQ495M9 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
USH1GQ495M9 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC30.48■■■□□ 2.47
USH1GQ495M9 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
USH1GQ495M9 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
USH1GQ495M9 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms