Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC32.88■■■□□ 2.85
ATP2B3Q16720 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC32.88■■■□□ 2.85
ATP2B3Q16720 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
ATP2B3Q16720 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC32.87■■■□□ 2.85
ATP2B3Q16720 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC32.87■■■□□ 2.85
ATP2B3Q16720 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
ATP2B3Q16720 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
ATP2B3Q16720 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC32.86■■■□□ 2.85
ATP2B3Q16720 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
ATP2B3Q16720 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC32.83■■■□□ 2.85
ATP2B3Q16720 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC32.82■■■□□ 2.85
ATP2B3Q16720 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC32.82■■■□□ 2.84
ATP2B3Q16720 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
ATP2B3Q16720 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
ATP2B3Q16720 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC32.8■■■□□ 2.84
ATP2B3Q16720 AL161658.1-201ENST00000623641 1967 ntBASIC32.79■■■□□ 2.84
ATP2B3Q16720 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
ATP2B3Q16720 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
ATP2B3Q16720 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
ATP2B3Q16720 BOD1-206ENST00000480951 814 ntTSL 2 BASIC32.77■■■□□ 2.84
ATP2B3Q16720 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC32.77■■■□□ 2.84
ATP2B3Q16720 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
ATP2B3Q16720 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC32.75■■■□□ 2.83
ATP2B3Q16720 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC32.75■■■□□ 2.83
ATP2B3Q16720 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC32.75■■■□□ 2.83
ATP2B3Q16720 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
ATP2B3Q16720 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
ATP2B3Q16720 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
ATP2B3Q16720 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
ATP2B3Q16720 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
ATP2B3Q16720 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
ATP2B3Q16720 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
ATP2B3Q16720 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
ATP2B3Q16720 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC32.71■■■□□ 2.83
ATP2B3Q16720 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC32.71■■■□□ 2.83
ATP2B3Q16720 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
ATP2B3Q16720 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC32.7■■■□□ 2.83
ATP2B3Q16720 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
ATP2B3Q16720 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC32.7■■■□□ 2.83
ATP2B3Q16720 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
ATP2B3Q16720 MLEC-202ENST00000412616 841 ntTSL 3 BASIC32.7■■■□□ 2.83
ATP2B3Q16720 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.82
ATP2B3Q16720 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
ATP2B3Q16720 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC32.68■■■□□ 2.82
ATP2B3Q16720 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC32.68■■■□□ 2.82
ATP2B3Q16720 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
ATP2B3Q16720 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC32.67■■■□□ 2.82
ATP2B3Q16720 ABHD17AP4-201ENST00000411545 909 ntBASIC32.67■■■□□ 2.82
ATP2B3Q16720 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC32.67■■■□□ 2.82
ATP2B3Q16720 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC32.67■■■□□ 2.82
ATP2B3Q16720 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC32.66■■■□□ 2.82
ATP2B3Q16720 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC32.66■■■□□ 2.82
ATP2B3Q16720 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC32.66■■■□□ 2.82
ATP2B3Q16720 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC32.65■■■□□ 2.82
ATP2B3Q16720 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
ATP2B3Q16720 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
ATP2B3Q16720 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC32.64■■■□□ 2.82
ATP2B3Q16720 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
ATP2B3Q16720 MIR6090-201ENST00000622481 60 ntBASIC32.64■■■□□ 2.82
ATP2B3Q16720 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC32.63■■■□□ 2.81
ATP2B3Q16720 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC32.63■■■□□ 2.81
ATP2B3Q16720 AC108673.1-201ENST00000510422 1159 ntBASIC32.63■■■□□ 2.81
ATP2B3Q16720 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC32.63■■■□□ 2.81
ATP2B3Q16720 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC32.62■■■□□ 2.81
ATP2B3Q16720 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC32.62■■■□□ 2.81
ATP2B3Q16720 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
ATP2B3Q16720 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC32.62■■■□□ 2.81
ATP2B3Q16720 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC32.61■■■□□ 2.81
ATP2B3Q16720 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC32.61■■■□□ 2.81
ATP2B3Q16720 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
ATP2B3Q16720 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
ATP2B3Q16720 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC32.58■■■□□ 2.81
ATP2B3Q16720 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
ATP2B3Q16720 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC32.56■■■□□ 2.8
ATP2B3Q16720 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
ATP2B3Q16720 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC32.55■■■□□ 2.8
ATP2B3Q16720 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC32.55■■■□□ 2.8
ATP2B3Q16720 CIB2-204ENST00000557846 934 ntTSL 3 BASIC32.55■■■□□ 2.8
ATP2B3Q16720 HGH1-207ENST00000628266 258 ntTSL 5 BASIC32.55■■■□□ 2.8
ATP2B3Q16720 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
ATP2B3Q16720 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC32.55■■■□□ 2.8
ATP2B3Q16720 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC32.54■■■□□ 2.8
ATP2B3Q16720 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
ATP2B3Q16720 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
ATP2B3Q16720 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
ATP2B3Q16720 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC32.53■■■□□ 2.8
ATP2B3Q16720 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC32.52■■■□□ 2.8
ATP2B3Q16720 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
ATP2B3Q16720 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
ATP2B3Q16720 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC32.52■■■□□ 2.8
ATP2B3Q16720 DUX4L29-201ENST00000425409 679 ntBASIC32.52■■■□□ 2.8
ATP2B3Q16720 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC32.52■■■□□ 2.8
ATP2B3Q16720 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
ATP2B3Q16720 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC32.51■■■□□ 2.79
ATP2B3Q16720 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
ATP2B3Q16720 AC021231.2-201ENST00000594613 730 ntBASIC32.5■■■□□ 2.79
ATP2B3Q16720 MIR7108-201ENST00000614319 87 ntBASIC32.5■■■□□ 2.79
ATP2B3Q16720 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
ATP2B3Q16720 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
ATP2B3Q16720 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC32.49■■■□□ 2.79
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms