Protein–RNA interactions for Protein: P25808

SPB4, ATP-dependent rRNA helicase SPB4, yeastyeast

Predicted RBP Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPB4P25808 IRC24YIR036C 792 nt11.38□□□□□ -0.59
SPB4P25808 TIR3YIL011W 810 nt11.37□□□□□ -0.59
SPB4P25808 MOD5YOR274W 1287 nt11.37□□□□□ -0.59
SPB4P25808 ATG22YCL038C 1587 nt11.37□□□□□ -0.59
SPB4P25808 RPS14BYJL191W 417 nt11.36□□□□□ -0.59
SPB4P25808 CMP2YML057W 1815 nt11.36□□□□□ -0.59
SPB4P25808 YGR259CYGR259C 441 nt11.34□□□□□ -0.59
SPB4P25808 PEX2YJL210W 816 nt11.34□□□□□ -0.59
SPB4P25808 PUS7YOR243C 2031 nt11.33□□□□□ -0.6
SPB4P25808 RAD23YEL037C 1197 nt11.33□□□□□ -0.6
SPB4P25808 YCL074WYCL074W 927 nt11.32□□□□□ -0.6
SPB4P25808 POM34YLR018C 900 nt11.32□□□□□ -0.6
SPB4P25808 PRO1YDR300C 1287 nt11.31□□□□□ -0.6
SPB4P25808 UTH1YKR042W 1098 nt11.3□□□□□ -0.6
SPB4P25808 YAT1YAR035W 2064 nt11.3□□□□□ -0.6
SPB4P25808 CAB5YDR196C 726 nt11.29□□□□□ -0.6
SPB4P25808 YLR437C-AYLR437C-A 228 nt11.29□□□□□ -0.6
SPB4P25808 AIM41YOR215C 558 nt11.29□□□□□ -0.6
SPB4P25808 YBL081WYBL081W 1107 nt11.27□□□□□ -0.61
SPB4P25808 SIR2YDL042C 1689 nt11.27□□□□□ -0.61
SPB4P25808 HIP1YGR191W 1812 nt11.26□□□□□ -0.61
SPB4P25808 YNR029CYNR029C 1290 nt11.26□□□□□ -0.61
SPB4P25808 YGR012WYGR012W 1182 nt11.25□□□□□ -0.61
SPB4P25808 STE4YOR212W 1272 nt11.25□□□□□ -0.61
SPB4P25808 TSC10YBR265W 963 nt11.24□□□□□ -0.61
SPB4P25808 NRT1YOR071C 1797 nt11.23□□□□□ -0.61
SPB4P25808 YHP1YDR451C 1062 nt11.22□□□□□ -0.61
SPB4P25808 LSM12YHR121W 564 nt11.22□□□□□ -0.61
SPB4P25808 YPL168WYPL168W 1293 nt11.22□□□□□ -0.61
SPB4P25808 ATG15YCR068W 1563 nt11.21□□□□□ -0.61
SPB4P25808 RIB3YDR487C 627 nt11.21□□□□□ -0.61
SPB4P25808 OCA1YNL099C 717 nt11.21□□□□□ -0.61
SPB4P25808 MCM5YLR274W 2328 nt11.2□□□□□ -0.62
SPB4P25808 GET2YER083C 858 nt11.2□□□□□ -0.62
SPB4P25808 TIF6YPR016C 738 nt11.2□□□□□ -0.62
SPB4P25808 BNA3YJL060W 1335 nt11.19□□□□□ -0.62
SPB4P25808 LSC2YGR244C 1284 nt11.19□□□□□ -0.62
SPB4P25808 YLR349WYLR349W 507 nt11.19□□□□□ -0.62
SPB4P25808 MMS21YEL019C 804 nt11.18□□□□□ -0.62
SPB4P25808 MPC1YGL080W 393 nt11.17□□□□□ -0.62
SPB4P25808 YML089CYML089C 369 nt11.17□□□□□ -0.62
SPB4P25808 ARP6YLR085C 1317 nt11.16□□□□□ -0.62
SPB4P25808 FUN14YAL008W 597 nt11.16□□□□□ -0.62
SPB4P25808 YLR279WYLR279W 390 nt11.16□□□□□ -0.62
SPB4P25808 ADH7YCR105W 1086 nt11.15□□□□□ -0.62
SPB4P25808 PAU15YIR041W 375 nt11.15□□□□□ -0.62
SPB4P25808 MRS3YJL133W 945 nt11.15□□□□□ -0.62
SPB4P25808 YJL195CYJL195C 702 nt11.15□□□□□ -0.62
SPB4P25808 MET28YIR017C 564 nt11.13□□□□□ -0.63
SPB4P25808 PLB1YMR008C 1995 nt11.13□□□□□ -0.63
SPB4P25808 ALG7YBR243C 1347 nt11.12□□□□□ -0.63
SPB4P25808 COA2YPL189C-A 207 nt11.12□□□□□ -0.63
SPB4P25808 GAP1YKR039W 1809 nt11.12□□□□□ -0.63
SPB4P25808 RTN2YDL204W 1182 nt11.1□□□□□ -0.63
SPB4P25808 MRPL36YBR122C 534 nt11.1□□□□□ -0.63
SPB4P25808 NPL6YMR091C 1308 nt11.09□□□□□ -0.63
SPB4P25808 CWC25YNL245C 540 nt11.09□□□□□ -0.63
SPB4P25808 YPL222C-AYPL222C-A 246 nt11.09□□□□□ -0.63
SPB4P25808 MSB4YOL112W 1479 nt11.08□□□□□ -0.64
SPB4P25808 YPR150WYPR150W 522 nt11.08□□□□□ -0.64
SPB4P25808 AI3Q0060 1248 nt11.07□□□□□ -0.64
SPB4P25808 YNL234WYNL234W 1281 nt11.07□□□□□ -0.64
SPB4P25808 ADH1YOL086C 1047 nt11.07□□□□□ -0.64
SPB4P25808 YCR049CYCR049C 447 nt11.06□□□□□ -0.64
SPB4P25808 GPN2YOR262W 1044 nt11.06□□□□□ -0.64
SPB4P25808 TAF4YMR005W 1167 nt11.05□□□□□ -0.64
SPB4P25808 SPT20YOL148C 1815 nt11.04□□□□□ -0.64
SPB4P25808 YER147C-AYER147C-A 411 nt11.02□□□□□ -0.65
SPB4P25808 SSN3YPL042C 1668 nt11.01□□□□□ -0.65
SPB4P25808 RRP1YDR087C 837 nt11.01□□□□□ -0.65
SPB4P25808 YMR306C-AYMR306C-A 390 nt11.01□□□□□ -0.65
SPB4P25808 ZTA1YBR046C 1005 nt11.01□□□□□ -0.65
SPB4P25808 HEL2YDR266C 1920 nt11□□□□□ -0.65
SPB4P25808 RPC82YPR190C 1965 nt11□□□□□ -0.65
SPB4P25808 YPI1YFR003C 468 nt11□□□□□ -0.65
SPB4P25808 FIT3YOR383C 615 nt11□□□□□ -0.65
SPB4P25808 PCL10YGL134W 1302 nt11□□□□□ -0.65
SPB4P25808 UTR1YJR049C 1593 nt10.99□□□□□ -0.65
SPB4P25808 YHR145CYHR145C 357 nt10.99□□□□□ -0.65
SPB4P25808 DIF1YLR437C 402 nt10.98□□□□□ -0.65
SPB4P25808 MLS1YNL117W 1665 nt10.98□□□□□ -0.65
SPB4P25808 LOT5YKL183W 921 nt10.97□□□□□ -0.65
SPB4P25808 GAT1YFL021W 1533 nt10.97□□□□□ -0.65
SPB4P25808 YPL277CYPL277C 1464 nt10.95□□□□□ -0.66
SPB4P25808 YEL008WYEL008W 381 nt10.95□□□□□ -0.66
SPB4P25808 SUA5YGL169W 1281 nt10.95□□□□□ -0.66
SPB4P25808 GND1YHR183W 1470 nt10.94□□□□□ -0.66
SPB4P25808 YMR210WYMR210W 1350 nt10.94□□□□□ -0.66
SPB4P25808 PRE2YPR103W 864 nt10.94□□□□□ -0.66
SPB4P25808 CPD1YGR247W 720 nt10.93□□□□□ -0.66
SPB4P25808 AKR2YOR034C 2250 nt10.92□□□□□ -0.66
SPB4P25808 COS6YGR295C 1146 nt10.92□□□□□ -0.66
SPB4P25808 MIX17YMR002W 471 nt10.92□□□□□ -0.66
SPB4P25808 DSE3YOR264W 1293 nt10.92□□□□□ -0.66
SPB4P25808 MTG2YHR168W 1557 nt10.91□□□□□ -0.66
SPB4P25808 APT2YDR441C 546 nt10.91□□□□□ -0.66
SPB4P25808 tS(GCU)LtS(GCU)L 80 nt10.91□□□□□ -0.66
SPB4P25808 YAR028WYAR028W 705 nt10.91□□□□□ -0.66
SPB4P25808 PRM5YIL117C 957 nt10.88□□□□□ -0.67
SPB4P25808 ESS1YJR017C 513 nt10.87□□□□□ -0.67
Retrieved 100 of 7,029 protein–RNA pairs in 31.9 ms