Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC36.21■■■■□ 3.39
COL5A2P05997 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC36.21■■■■□ 3.39
COL5A2P05997 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC36.21■■■■□ 3.39
COL5A2P05997 LINC01971-201ENST00000617888 1048 ntBASIC36.2■■■■□ 3.39
COL5A2P05997 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC36.19■■■■□ 3.38
COL5A2P05997 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC36.19■■■■□ 3.38
COL5A2P05997 DUX4L11-201ENST00000611504 1267 ntBASIC36.19■■■■□ 3.38
COL5A2P05997 DUX4L12-201ENST00000614593 1267 ntBASIC36.19■■■■□ 3.38
COL5A2P05997 DUX4L14-201ENST00000621227 1267 ntBASIC36.19■■■■□ 3.38
COL5A2P05997 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC36.19■■■■□ 3.38
COL5A2P05997 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC36.19■■■■□ 3.38
COL5A2P05997 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC36.18■■■■□ 3.38
COL5A2P05997 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC36.18■■■■□ 3.38
COL5A2P05997 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC36.18■■■■□ 3.38
COL5A2P05997 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC36.16■■■■□ 3.38
COL5A2P05997 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC36.16■■■■□ 3.38
COL5A2P05997 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC36.16■■■■□ 3.38
COL5A2P05997 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC36.15■■■■□ 3.38
COL5A2P05997 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC36.15■■■■□ 3.38
COL5A2P05997 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC36.15■■■■□ 3.38
COL5A2P05997 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC36.14■■■■□ 3.38
COL5A2P05997 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC36.14■■■■□ 3.38
COL5A2P05997 AGPS-202ENST00000409888 815 ntTSL 4 BASIC36.14■■■■□ 3.38
COL5A2P05997 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC36.14■■■■□ 3.38
COL5A2P05997 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC36.13■■■■□ 3.37
COL5A2P05997 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC36.13■■■■□ 3.37
COL5A2P05997 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC36.12■■■■□ 3.37
COL5A2P05997 BRD4-212ENST00000630599 726 ntTSL 2 BASIC36.11■■■■□ 3.37
COL5A2P05997 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC36.11■■■■□ 3.37
COL5A2P05997 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC36.1■■■■□ 3.37
COL5A2P05997 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC36.1■■■■□ 3.37
COL5A2P05997 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC36.1■■■■□ 3.37
COL5A2P05997 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC36.1■■■■□ 3.37
COL5A2P05997 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC36.1■■■■□ 3.37
COL5A2P05997 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC36.09■■■■□ 3.37
COL5A2P05997 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC36.07■■■■□ 3.36
COL5A2P05997 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC36.06■■■■□ 3.36
COL5A2P05997 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC36.05■■■■□ 3.36
COL5A2P05997 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC36.05■■■■□ 3.36
COL5A2P05997 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC36.05■■■■□ 3.36
COL5A2P05997 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC36.05■■■■□ 3.36
COL5A2P05997 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC36.05■■■■□ 3.36
COL5A2P05997 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC36.05■■■■□ 3.36
COL5A2P05997 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC36.03■■■■□ 3.36
COL5A2P05997 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC36.02■■■■□ 3.36
COL5A2P05997 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC36.01■■■■□ 3.36
COL5A2P05997 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC36.01■■■■□ 3.36
COL5A2P05997 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC36.01■■■■□ 3.36
COL5A2P05997 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC36■■■■□ 3.35
COL5A2P05997 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC36■■■■□ 3.35
COL5A2P05997 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC36■■■■□ 3.35
COL5A2P05997 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35
COL5A2P05997 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC35.98■■■■□ 3.35
COL5A2P05997 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC35.97■■■■□ 3.35
COL5A2P05997 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC35.96■■■■□ 3.35
COL5A2P05997 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC35.95■■■■□ 3.35
COL5A2P05997 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC35.95■■■■□ 3.34
COL5A2P05997 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC35.94■■■■□ 3.34
COL5A2P05997 ABHD17AP3-201ENST00000503096 1137 ntBASIC35.93■■■■□ 3.34
COL5A2P05997 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC35.93■■■■□ 3.34
COL5A2P05997 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC35.92■■■■□ 3.34
COL5A2P05997 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
COL5A2P05997 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC35.92■■■■□ 3.34
COL5A2P05997 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC35.91■■■■□ 3.34
COL5A2P05997 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC35.91■■■■□ 3.34
COL5A2P05997 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC35.91■■■■□ 3.34
COL5A2P05997 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC35.9■■■■□ 3.34
COL5A2P05997 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
COL5A2P05997 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC35.86■■■■□ 3.33
COL5A2P05997 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC35.86■■■■□ 3.33
COL5A2P05997 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC35.83■■■■□ 3.33
COL5A2P05997 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC35.82■■■■□ 3.33
COL5A2P05997 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC35.82■■■■□ 3.32
COL5A2P05997 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC35.82■■■■□ 3.32
COL5A2P05997 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC35.81■■■■□ 3.32
COL5A2P05997 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC35.81■■■■□ 3.32
COL5A2P05997 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
COL5A2P05997 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC35.8■■■■□ 3.32
COL5A2P05997 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC35.8■■■■□ 3.32
COL5A2P05997 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC35.79■■■■□ 3.32
COL5A2P05997 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC35.79■■■■□ 3.32
COL5A2P05997 METRNL-202ENST00000570778 967 ntTSL 5 BASIC35.79■■■■□ 3.32
COL5A2P05997 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC35.78■■■■□ 3.32
COL5A2P05997 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC35.78■■■■□ 3.32
COL5A2P05997 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC35.77■■■■□ 3.32
COL5A2P05997 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
COL5A2P05997 DUX4L13-201ENST00000554103 1267 ntBASIC35.77■■■■□ 3.32
COL5A2P05997 DUX4L15-201ENST00000611059 1267 ntBASIC35.77■■■■□ 3.32
COL5A2P05997 DUX4L23-201ENST00000615195 1269 ntBASIC35.77■■■■□ 3.32
COL5A2P05997 DUX4L24-201ENST00000617576 1269 ntBASIC35.77■■■■□ 3.32
COL5A2P05997 DUX4L22-201ENST00000618238 1269 ntBASIC35.77■■■■□ 3.32
COL5A2P05997 DUX4L20-201ENST00000619712 1269 ntBASIC35.77■■■■□ 3.32
COL5A2P05997 DUX4L21-201ENST00000622058 1269 ntBASIC35.77■■■■□ 3.32
COL5A2P05997 DUX4L10-201ENST00000622460 1267 ntBASIC35.77■■■■□ 3.32
COL5A2P05997 DUX4L25-201ENST00000624915 1269 ntBASIC35.77■■■■□ 3.32
COL5A2P05997 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
COL5A2P05997 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC35.76■■■■□ 3.32
COL5A2P05997 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.31
COL5A2P05997 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC35.74■■■■□ 3.31
COL5A2P05997 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms